RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 POGZQ7Z3K3 1410 aa40.74■■■■■ 4.11
AC009041.3-201ENST00000564390 EFCAB2Q5VUJ9 269 aa40.73■■■■■ 4.11
AC009041.3-201ENST00000564390 CDC42BPBQ9Y5S2 1711 aa40.72■■■■■ 4.11
AC009041.3-201ENST00000564390 PREX2Q70Z35 1606 aa40.71■■■■■ 4.11
AC009041.3-201ENST00000564390 ZFYVE16Q7Z3T8 1539 aa40.68■■■■■ 4.1
AC009041.3-201ENST00000564390 LOC105371045A0A1W2PR82 267 aa40.68■■■■■ 4.1
AC009041.3-201ENST00000564390 YEATS2Q9ULM3 1422 aa40.66■■■■■ 4.1
AC009041.3-201ENST00000564390 CDC42BPAQ5VT25 1732 aa40.64■■■■■ 4.1
AC009041.3-201ENST00000564390 ADAMTSL3P82987 1691 aa40.6■■■■■ 4.09
AC009041.3-201ENST00000564390 BCORL1Q5H9F3 1711 aa40.6■■■■■ 4.09
AC009041.3-201ENST00000564390 ARID4BQ4LE39 1312 aaPredicted RBP40.6■■■■■ 4.09
AC009041.3-201ENST00000564390 MAGI2Q86UL8 1455 aa40.59■■■■■ 4.09
AC009041.3-201ENST00000564390 SIGLEC1Q9BZZ2 1709 aa40.57■■■■■ 4.09
AC009041.3-201ENST00000564390 ABCC1P33527 1531 aa40.54■■■■■ 4.08
AC009041.3-201ENST00000564390 ZNF518AQ6AHZ1 1483 aa40.54■■■■■ 4.08
AC009041.3-201ENST00000564390 MTUS2Q5JR59 1369 aa40.52■■■■■ 4.08
AC009041.3-201ENST00000564390 MADDQ8WXG6 1647 aa40.51■■■■■ 4.08
AC009041.3-201ENST00000564390 KDM5CP41229 1560 aa40.51■■■■■ 4.08
AC009041.3-201ENST00000564390 ITSN2Q9NZM3 1697 aa40.5■■■■■ 4.07
AC009041.3-201ENST00000564390 ARHGEF12Q9NZN5 1544 aa40.47■■■■■ 4.07
AC009041.3-201ENST00000564390 AFAP1Q8N556 730 aa40.47■■■■■ 4.07
AC009041.3-201ENST00000564390 EHBP1L1Q8N3D4 1523 aa40.46■■■■■ 4.07
AC009041.3-201ENST00000564390 GPATCH8Q9UKJ3 1502 aaKnown RBP40.46■■■■■ 4.07
AC009041.3-201ENST00000564390 HECW2Q9P2P5 1572 aa40.44■■■■■ 4.06
AC009041.3-201ENST00000564390 SAMD9LQ8IVG5 1584 aa40.44■■■■■ 4.06
AC009041.3-201ENST00000564390 PTPRMP28827 1452 aa40.43■■■■■ 4.06
AC009041.3-201ENST00000564390 TRAPPC8Q9Y2L5 1435 aa40.42■■■■■ 4.06
AC009041.3-201ENST00000564390 ATP10AO60312 1499 aa40.39■■■■■ 4.06
AC009041.3-201ENST00000564390 ZNF777Q9ULD5 760 aaPredicted RBP40.39■■■■■ 4.06
AC009041.3-201ENST00000564390 RIMS1Q86UR5 1692 aaKnown RBP40.38■■■■■ 4.05
AC009041.3-201ENST00000564390 C9orf84Q5VXU9 1444 aa40.38■■■■■ 4.05
AC009041.3-201ENST00000564390 CCNB3Q8WWL7 1395 aa40.37■■■■■ 4.05
AC009041.3-201ENST00000564390 VPS8Q8N3P4 1428 aa40.36■■■■■ 4.05
AC009041.3-201ENST00000564390 SYCP2Q9BX26 1530 aa40.36■■■■■ 4.05
AC009041.3-201ENST00000564390 TIAM1Q13009 1591 aa40.35■■■■■ 4.05
AC009041.3-201ENST00000564390 DIP2CQ9Y2E4 1556 aa40.35■■■■■ 4.05
AC009041.3-201ENST00000564390 MYT1LQ9UL68 1186 aa40.35■■■■■ 4.05
AC009041.3-201ENST00000564390 ABCA6Q8N139 1617 aa40.34■■■■■ 4.05
AC009041.3-201ENST00000564390 MLECQ14165 292 aa40.3■■■■■ 4.04
AC009041.3-201ENST00000564390 MLH3Q9UHC1 1453 aa40.3■■■■■ 4.04
AC009041.3-201ENST00000564390 CFDP1Q9UEE9 299 aaPredicted RBP40.28■■■■■ 4.04
AC009041.3-201ENST00000564390 FER1L4A9Z1Z3 1794 aa40.25■■■■■ 4.03
AC009041.3-201ENST00000564390 KIDINS220Q9ULH0 1771 aa40.25■■■■■ 4.03
AC009041.3-201ENST00000564390 SUPT6HQ7KZ85 1726 aaKnown RBP40.23■■■■■ 4.03
AC009041.3-201ENST00000564390 HNRNPMP52272 730 aaKnown RBP eCLIP40.21■■■■■ 4.03
AC009041.3-201ENST00000564390 REREQ9P2R6 1566 aa40.2■■■■■ 4.03
AC009041.3-201ENST00000564390 PLEKHH2Q8IVE3 1493 aa40.19■■■■■ 4.03
AC009041.3-201ENST00000564390 NCOA2Q15596 1464 aa40.19■■■■■ 4.02
AC009041.3-201ENST00000564390 KIAA1107Q9UPP5 1409 aa40.16■■■■■ 4.02
AC009041.3-201ENST00000564390 PLPPR3Q6T4P5 718 aa40.14■■■■■ 4.02
AC009041.3-201ENST00000564390 ZNF644Q9H582 1327 aaPredicted RBP40.13■■■■■ 4.01
AC009041.3-201ENST00000564390 LRRC9Q6ZRR7 1453 aa40.12■■■■■ 4.01
AC009041.3-201ENST00000564390 SPAG9O60271 1321 aaKnown RBP40.1■■■■■ 4.01
AC009041.3-201ENST00000564390 INO80Q9ULG1 1556 aaPredicted RBP40.1■■■■■ 4.01
AC009041.3-201ENST00000564390 ATP7AQ04656 1500 aa40.09■■■■■ 4.01
AC009041.3-201ENST00000564390 AGLP35573 1532 aa40.06■■■■■ 4
AC009041.3-201ENST00000564390 MAP3K1Q13233 1512 aa40.03■■■■■ 4
AC009041.3-201ENST00000564390 MBD5Q9P267 1494 aa40.01■■■■■ 4
AC009041.3-201ENST00000564390 CAMSAP2Q08AD1 1489 aa40■■■■□ 3.99
AC009041.3-201ENST00000564390 KANK4Q5T7N3 995 aaPredicted RBP39.99■■■■□ 3.99
AC009041.3-201ENST00000564390 LMTK3Q96Q04 1460 aa39.99■■■■□ 3.99
AC009041.3-201ENST00000564390 PLXNC1O60486 1568 aa39.92■■■■□ 3.98
AC009041.3-201ENST00000564390 A2MP01023 1474 aa39.89■■■■□ 3.98
AC009041.3-201ENST00000564390 CEBPAP49715 358 aaPredicted RBP39.89■■■■□ 3.98
AC009041.3-201ENST00000564390 CCDC141Q6ZP82 1450 aa39.88■■■■□ 3.98
AC009041.3-201ENST00000564390 ADGBQ8N7X0 1667 aa39.87■■■■□ 3.97
AC009041.3-201ENST00000564390 C3P01024 1663 aa39.83■■■■□ 3.97
AC009041.3-201ENST00000564390 RTEL1-TNFRSF6BF6WH68 1400 aa39.8■■■■□ 3.96
AC009041.3-201ENST00000564390 ARHGEF5Q12774 1597 aa39.8■■■■□ 3.96
AC009041.3-201ENST00000564390 ESF1Q9H501 851 aaKnown RBP39.79■■■■□ 3.96
AC009041.3-201ENST00000564390 MYOM3Q5VTT5 1437 aa39.79■■■■□ 3.96
AC009041.3-201ENST00000564390 PREX1Q8TCU6 1659 aa39.79■■■■□ 3.96
AC009041.3-201ENST00000564390 APLP2Q06481 763 aa39.78■■■■□ 3.96
AC009041.3-201ENST00000564390 HSPA2P54652 639 aa39.77■■■■□ 3.96
AC009041.3-201ENST00000564390 CNTLNQ9NXG0 1405 aa39.73■■■■□ 3.95
AC009041.3-201ENST00000564390 MROH2AA6NES4 1674 aa39.7■■■■□ 3.95
AC009041.3-201ENST00000564390 CLTCQ00610 1675 aaKnown RBP39.7■■■■□ 3.95
AC009041.3-201ENST00000564390 MIA2Q96PC5 1412 aa39.69■■■■□ 3.94
AC009041.3-201ENST00000564390 RSPH4AQ5TD94 716 aa39.67■■■■□ 3.94
AC009041.3-201ENST00000564390 GGT6Q6P531 493 aa39.65■■■■□ 3.94
AC009041.3-201ENST00000564390 DHX29Q7Z478 1369 aaKnown RBP39.64■■■■□ 3.94
AC009041.3-201ENST00000564390 UHRF1BP1Q6BDS2 1440 aa39.62■■■■□ 3.93
AC009041.3-201ENST00000564390 MAST1Q9Y2H9 1570 aa39.6■■■■□ 3.93
AC009041.3-201ENST00000564390 TSPY4P0CV99 314 aa39.59■■■■□ 3.93
AC009041.3-201ENST00000564390 TSPY10P0CW01 314 aa39.59■■■■□ 3.93
AC009041.3-201ENST00000564390 PTPN23Q9H3S7 1636 aa39.58■■■■□ 3.93
AC009041.3-201ENST00000564390 ZMYM3Q14202 1370 aa39.57■■■■□ 3.92
AC009041.3-201ENST00000564390 SETD1BQ9UPS6 1966 aaKnown RBP39.53■■■■□ 3.92
AC009041.3-201ENST00000564390 KIF3BO15066 747 aa39.52■■■■□ 3.92
AC009041.3-201ENST00000564390 FGD6Q6ZV73 1430 aa39.51■■■■□ 3.92
AC009041.3-201ENST00000564390 CROCC2H7BZ55 1655 aa39.5■■■■□ 3.91
AC009041.3-201ENST00000564390 NPATQ14207 1427 aa39.48■■■■□ 3.91
AC009041.3-201ENST00000564390 TCOF1Q13428 1488 aaKnown RBP39.43■■■■□ 3.9
AC009041.3-201ENST00000564390 PPP6R1Q9UPN7 881 aa39.43■■■■□ 3.9
AC009041.3-201ENST00000564390 KDM5DQ9BY66 1539 aa39.43■■■■□ 3.9
AC009041.3-201ENST00000564390 ABCC5O15440 1437 aa39.42■■■■□ 3.9
AC009041.3-201ENST00000564390 PTPRKQ15262 1439 aa39.41■■■■□ 3.9
AC009041.3-201ENST00000564390 DNMT1P26358 1616 aaKnown RBP39.41■■■■□ 3.9
AC009041.3-201ENST00000564390 STRCQ7RTU9 1775 aa39.41■■■■□ 3.9
AC009041.3-201ENST00000564390 MYO3AQ8NEV4 1616 aa39.4■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms