RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 KIF14Q15058 1648 aa13.33□□□□□ -0.28
NSMCE1-207ENST00000564342 NEO1Q92859 1461 aa13.33□□□□□ -0.28
NSMCE1-207ENST00000564342 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.28
NSMCE1-207ENST00000564342 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
NSMCE1-207ENST00000564342 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
NSMCE1-207ENST00000564342 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
NSMCE1-207ENST00000564342 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
NSMCE1-207ENST00000564342 MYO5CQ9NQX4 1742 aa13.31□□□□□ -0.28
NSMCE1-207ENST00000564342 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-207ENST00000564342 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-207ENST00000564342 FRMPD1Q5SYB0 1578 aa13.28□□□□□ -0.28
NSMCE1-207ENST00000564342 FANCAO15360 1455 aa13.28□□□□□ -0.28
NSMCE1-207ENST00000564342 RICTORQ6R327 1708 aa13.27□□□□□ -0.28
NSMCE1-207ENST00000564342 CAPN15O75808 1086 aa13.27□□□□□ -0.29
NSMCE1-207ENST00000564342 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
NSMCE1-207ENST00000564342 PLCH2O75038 1416 aa13.26□□□□□ -0.29
NSMCE1-207ENST00000564342 AKNAQ7Z591 1439 aa13.26□□□□□ -0.29
NSMCE1-207ENST00000564342 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
NSMCE1-207ENST00000564342 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
NSMCE1-207ENST00000564342 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
NSMCE1-207ENST00000564342 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
NSMCE1-207ENST00000564342 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
NSMCE1-207ENST00000564342 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
NSMCE1-207ENST00000564342 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
NSMCE1-207ENST00000564342 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
NSMCE1-207ENST00000564342 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
NSMCE1-207ENST00000564342 ARHGEF40Q8TER5 1519 aa13.19□□□□□ -0.3
NSMCE1-207ENST00000564342 EFCAB2Q5VUJ9 269 aa13.18□□□□□ -0.3
NSMCE1-207ENST00000564342 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
NSMCE1-207ENST00000564342 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
NSMCE1-207ENST00000564342 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
NSMCE1-207ENST00000564342 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-207ENST00000564342 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
NSMCE1-207ENST00000564342 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
NSMCE1-207ENST00000564342 ABCC1P33527 1531 aa13.15□□□□□ -0.3
NSMCE1-207ENST00000564342 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
NSMCE1-207ENST00000564342 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
NSMCE1-207ENST00000564342 MTUS2Q5JR59 1369 aa13.14□□□□□ -0.31
NSMCE1-207ENST00000564342 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
NSMCE1-207ENST00000564342 KDM5CP41229 1560 aa13.14□□□□□ -0.31
NSMCE1-207ENST00000564342 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-207ENST00000564342 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
NSMCE1-207ENST00000564342 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
NSMCE1-207ENST00000564342 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
NSMCE1-207ENST00000564342 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
NSMCE1-207ENST00000564342 BCORL1Q5H9F3 1711 aa13.12□□□□□ -0.31
NSMCE1-207ENST00000564342 ARHGEF12Q9NZN5 1544 aa13.12□□□□□ -0.31
NSMCE1-207ENST00000564342 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
NSMCE1-207ENST00000564342 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
NSMCE1-207ENST00000564342 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-207ENST00000564342 MAP3K1Q13233 1512 aa13.08□□□□□ -0.31
NSMCE1-207ENST00000564342 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
NSMCE1-207ENST00000564342 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.32
NSMCE1-207ENST00000564342 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-207ENST00000564342 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
NSMCE1-207ENST00000564342 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
NSMCE1-207ENST00000564342 ABCA6Q8N139 1617 aa13.07□□□□□ -0.32
NSMCE1-207ENST00000564342 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
NSMCE1-207ENST00000564342 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
NSMCE1-207ENST00000564342 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
NSMCE1-207ENST00000564342 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
NSMCE1-207ENST00000564342 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
NSMCE1-207ENST00000564342 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
NSMCE1-207ENST00000564342 ATP10AO60312 1499 aa13.05□□□□□ -0.32
NSMCE1-207ENST00000564342 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-207ENST00000564342 REREQ9P2R6 1566 aa13.05□□□□□ -0.32
NSMCE1-207ENST00000564342 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
NSMCE1-207ENST00000564342 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
NSMCE1-207ENST00000564342 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-207ENST00000564342 ARID4BQ4LE39 1312 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-207ENST00000564342 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
NSMCE1-207ENST00000564342 RIMS1Q86UR5 1692 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-207ENST00000564342 PTPRMP28827 1452 aa13.02□□□□□ -0.33
NSMCE1-207ENST00000564342 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-207ENST00000564342 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.33
NSMCE1-207ENST00000564342 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-207ENST00000564342 ATP7AQ04656 1500 aa13□□□□□ -0.33
NSMCE1-207ENST00000564342 MBD5Q9P267 1494 aa13□□□□□ -0.33
NSMCE1-207ENST00000564342 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
NSMCE1-207ENST00000564342 ZNF644Q9H582 1327 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-207ENST00000564342 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
NSMCE1-207ENST00000564342 AGLP35573 1532 aa12.98□□□□□ -0.33
NSMCE1-207ENST00000564342 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
NSMCE1-207ENST00000564342 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-207ENST00000564342 SPAG9O60271 1321 aaKnown RBP12.96□□□□□ -0.33
NSMCE1-207ENST00000564342 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.34
NSMCE1-207ENST00000564342 PLXNC1O60486 1568 aa12.95□□□□□ -0.34
NSMCE1-207ENST00000564342 ARHGEF5Q12774 1597 aa12.95□□□□□ -0.34
NSMCE1-207ENST00000564342 MLECQ14165 292 aa12.95□□□□□ -0.34
NSMCE1-207ENST00000564342 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-207ENST00000564342 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
NSMCE1-207ENST00000564342 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
NSMCE1-207ENST00000564342 APLP2Q06481 763 aa12.93□□□□□ -0.34
NSMCE1-207ENST00000564342 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
NSMCE1-207ENST00000564342 A2MP01023 1474 aa12.92□□□□□ -0.34
NSMCE1-207ENST00000564342 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
NSMCE1-207ENST00000564342 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
NSMCE1-207ENST00000564342 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.35
NSMCE1-207ENST00000564342 C3P01024 1663 aa12.89□□□□□ -0.35
NSMCE1-207ENST00000564342 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms