RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 FANCAO15360 1455 aa28.87■■■□□ 2.21
PKD1-227ENST00000564313 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PKD1-227ENST00000564313 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
PKD1-227ENST00000564313 RAPGEF3O95398 923 aa28.81■■■□□ 2.2
PKD1-227ENST00000564313 BCORL1Q5H9F3 1711 aa28.8■■■□□ 2.2
PKD1-227ENST00000564313 AKNAQ7Z591 1439 aa28.8■■■□□ 2.2
PKD1-227ENST00000564313 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
PKD1-227ENST00000564313 MADDQ8WXG6 1647 aa28.8■■■□□ 2.2
PKD1-227ENST00000564313 EFCAB2Q5VUJ9 269 aa28.79■■■□□ 2.2
PKD1-227ENST00000564313 ARHGAP5Q13017 1502 aa28.78■■■□□ 2.2
PKD1-227ENST00000564313 APLP2Q06481 763 aa28.76■■■□□ 2.19
PKD1-227ENST00000564313 CDC42BPAQ5VT25 1732 aa28.75■■■□□ 2.19
PKD1-227ENST00000564313 CDC42BPBQ9Y5S2 1711 aa28.75■■■□□ 2.19
PKD1-227ENST00000564313 ARID4BQ4LE39 1312 aaPredicted RBP28.74■■■□□ 2.19
PKD1-227ENST00000564313 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
PKD1-227ENST00000564313 SUPT6HQ7KZ85 1726 aaKnown RBP28.74■■■□□ 2.19
PKD1-227ENST00000564313 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
PKD1-227ENST00000564313 DENND4BO75064 1496 aaPredicted RBP28.72■■■□□ 2.19
PKD1-227ENST00000564313 FRMPD1Q5SYB0 1578 aa28.7■■■□□ 2.18
PKD1-227ENST00000564313 GPATCH8Q9UKJ3 1502 aaKnown RBP28.69■■■□□ 2.18
PKD1-227ENST00000564313 ITSN2Q9NZM3 1697 aa28.68■■■□□ 2.18
PKD1-227ENST00000564313 HSPA2P54652 639 aa28.68■■■□□ 2.18
PKD1-227ENST00000564313 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
PKD1-227ENST00000564313 SCAPERQ9BY12 1400 aa28.66■■■□□ 2.18
PKD1-227ENST00000564313 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
PKD1-227ENST00000564313 NCOA2Q15596 1464 aa28.66■■■□□ 2.18
PKD1-227ENST00000564313 POGZQ7Z3K3 1410 aa28.62■■■□□ 2.17
PKD1-227ENST00000564313 CERKQ8TCT0 537 aa28.62■■■□□ 2.17
PKD1-227ENST00000564313 CFDP1Q9UEE9 299 aaPredicted RBP28.61■■■□□ 2.17
PKD1-227ENST00000564313 ABCC1P33527 1531 aa28.6■■■□□ 2.17
PKD1-227ENST00000564313 ZMYM4Q5VZL5 1548 aa28.6■■■□□ 2.17
PKD1-227ENST00000564313 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
PKD1-227ENST00000564313 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
PKD1-227ENST00000564313 PLEKHH2Q8IVE3 1493 aa28.59■■■□□ 2.17
PKD1-227ENST00000564313 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
PKD1-227ENST00000564313 ARHGEF40Q8TER5 1519 aa28.57■■■□□ 2.16
PKD1-227ENST00000564313 MAGI2Q86UL8 1455 aa28.56■■■□□ 2.16
PKD1-227ENST00000564313 SAMD9LQ8IVG5 1584 aa28.56■■■□□ 2.16
PKD1-227ENST00000564313 ILDR2Q71H61 639 aa28.54■■■□□ 2.16
PKD1-227ENST00000564313 KIAA1107Q9UPP5 1409 aa28.53■■■□□ 2.16
PKD1-227ENST00000564313 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
PKD1-227ENST00000564313 KDM5CP41229 1560 aa28.52■■■□□ 2.16
PKD1-227ENST00000564313 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
PKD1-227ENST00000564313 ARHGEF12Q9NZN5 1544 aa28.48■■■□□ 2.15
PKD1-227ENST00000564313 DISP3Q9P2K9 1392 aa28.48■■■□□ 2.15
PKD1-227ENST00000564313 ZFYVE16Q7Z3T8 1539 aa28.48■■■□□ 2.15
PKD1-227ENST00000564313 SOCS7O14512 581 aa28.47■■■□□ 2.15
PKD1-227ENST00000564313 AFAP1Q8N556 730 aa28.47■■■□□ 2.15
PKD1-227ENST00000564313 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
PKD1-227ENST00000564313 YEATS2Q9ULM3 1422 aa28.45■■■□□ 2.15
PKD1-227ENST00000564313 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
PKD1-227ENST00000564313 TRAPPC8Q9Y2L5 1435 aa28.44■■■□□ 2.14
PKD1-227ENST00000564313 SIGLEC1Q9BZZ2 1709 aa28.44■■■□□ 2.14
PKD1-227ENST00000564313 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
PKD1-227ENST00000564313 CAMSAP2Q08AD1 1489 aa28.41■■■□□ 2.14
PKD1-227ENST00000564313 HNRNPMP52272 730 aaKnown RBP eCLIP28.39■■■□□ 2.14
PKD1-227ENST00000564313 MLECQ14165 292 aa28.39■■■□□ 2.14
PKD1-227ENST00000564313 RSPH4AQ5TD94 716 aa28.37■■■□□ 2.13
PKD1-227ENST00000564313 MBD5Q9P267 1494 aa28.37■■■□□ 2.13
PKD1-227ENST00000564313 ZNF644Q9H582 1327 aaPredicted RBP28.37■■■□□ 2.13
PKD1-227ENST00000564313 MYT1LQ9UL68 1186 aa28.35■■■□□ 2.13
PKD1-227ENST00000564313 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
PKD1-227ENST00000564313 ATP10AO60312 1499 aa28.34■■■□□ 2.13
PKD1-227ENST00000564313 SPAG9O60271 1321 aaKnown RBP28.33■■■□□ 2.13
PKD1-227ENST00000564313 C9orf84Q5VXU9 1444 aa28.33■■■□□ 2.13
PKD1-227ENST00000564313 ARHGEF5Q12774 1597 aa28.33■■■□□ 2.12
PKD1-227ENST00000564313 CCDC141Q6ZP82 1450 aa28.32■■■□□ 2.12
PKD1-227ENST00000564313 KIDINS220Q9ULH0 1771 aa28.32■■■□□ 2.12
PKD1-227ENST00000564313 DIP2CQ9Y2E4 1556 aa28.31■■■□□ 2.12
PKD1-227ENST00000564313 REREQ9P2R6 1566 aa28.3■■■□□ 2.12
PKD1-227ENST00000564313 INO80Q9ULG1 1556 aaPredicted RBP28.3■■■□□ 2.12
PKD1-227ENST00000564313 ATP7AQ04656 1500 aa28.29■■■□□ 2.12
PKD1-227ENST00000564313 FGD6Q6ZV73 1430 aa28.29■■■□□ 2.12
PKD1-227ENST00000564313 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
PKD1-227ENST00000564313 PTPN23Q9H3S7 1636 aa28.28■■■□□ 2.12
PKD1-227ENST00000564313 RTEL1-TNFRSF6BF6WH68 1400 aa28.27■■■□□ 2.12
PKD1-227ENST00000564313 PREX1Q8TCU6 1659 aa28.26■■■□□ 2.11
PKD1-227ENST00000564313 TCOF1Q13428 1488 aaKnown RBP28.25■■■□□ 2.11
PKD1-227ENST00000564313 STRCQ7RTU9 1775 aa28.22■■■□□ 2.11
PKD1-227ENST00000564313 CEBPAP49715 358 aaPredicted RBP28.22■■■□□ 2.11
PKD1-227ENST00000564313 SPATA31D1Q6ZQQ2 1576 aa28.21■■■□□ 2.11
PKD1-227ENST00000564313 DMRT2Q9Y5R5 561 aa28.21■■■□□ 2.11
PKD1-227ENST00000564313 TSPY4P0CV99 314 aa28.2■■■□□ 2.1
PKD1-227ENST00000564313 TSPY10P0CW01 314 aa28.2■■■□□ 2.1
PKD1-227ENST00000564313 AGLP35573 1532 aa28.18■■■□□ 2.1
PKD1-227ENST00000564313 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
PKD1-227ENST00000564313 MAST1Q9Y2H9 1570 aa28.17■■■□□ 2.1
PKD1-227ENST00000564313 SHANK2Q9UPX8 1470 aa28.14■■■□□ 2.09
PKD1-227ENST00000564313 DNMT1P26358 1616 aaKnown RBP28.14■■■□□ 2.09
PKD1-227ENST00000564313 A2MP01023 1474 aa28.13■■■□□ 2.09
PKD1-227ENST00000564313 CROCC2H7BZ55 1655 aa28.13■■■□□ 2.09
PKD1-227ENST00000564313 PLXNC1O60486 1568 aa28.12■■■□□ 2.09
PKD1-227ENST00000564313 UHRF1BP1Q6BDS2 1440 aa28.11■■■□□ 2.09
PKD1-227ENST00000564313 DAPK1P53355 1430 aa28.1■■■□□ 2.09
PKD1-227ENST00000564313 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
PKD1-227ENST00000564313 ABCC5O15440 1437 aa28.09■■■□□ 2.09
PKD1-227ENST00000564313 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
PKD1-227ENST00000564313 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
PKD1-227ENST00000564313 PTPRTO14522 1441 aa28.06■■■□□ 2.08
PKD1-227ENST00000564313 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms