RNA–Protein interactions for RNA: ENST00000564239.1

BBS4-207, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-207ENST00000564239 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
BBS4-207ENST00000564239 TMEM92Q6UXU6 159 aa11.8□□□□□ -0.52
BBS4-207ENST00000564239 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
BBS4-207ENST00000564239 PDE4AP27815 886 aa11.78□□□□□ -0.52
BBS4-207ENST00000564239 LHX8Q68G74 356 aa11.78□□□□□ -0.52
BBS4-207ENST00000564239 MAMSTRQ6ZN01 415 aa11.78□□□□□ -0.52
BBS4-207ENST00000564239 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
BBS4-207ENST00000564239 KIF3CO14782 793 aa11.76□□□□□ -0.53
BBS4-207ENST00000564239 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
BBS4-207ENST00000564239 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
BBS4-207ENST00000564239 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
BBS4-207ENST00000564239 C2orf72A6NCS6 295 aa11.75□□□□□ -0.53
BBS4-207ENST00000564239 MFSD10Q14728 455 aa11.73□□□□□ -0.53
BBS4-207ENST00000564239 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
BBS4-207ENST00000564239 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.53
BBS4-207ENST00000564239 FOXK1P85037 733 aa11.7□□□□□ -0.54
BBS4-207ENST00000564239 DSG2Q14126 1118 aa11.7□□□□□ -0.54
BBS4-207ENST00000564239 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
BBS4-207ENST00000564239 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
BBS4-207ENST00000564239 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
BBS4-207ENST00000564239 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
BBS4-207ENST00000564239 E2F4Q16254 413 aa11.61□□□□□ -0.55
BBS4-207ENST00000564239 CAMK2BQ13554 666 aa11.6□□□□□ -0.55
BBS4-207ENST00000564239 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
BBS4-207ENST00000564239 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
BBS4-207ENST00000564239 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
BBS4-207ENST00000564239 HOXB3P14651 431 aaPredicted RBP11.54□□□□□ -0.56
BBS4-207ENST00000564239 SLC34A2O95436 690 aa11.53□□□□□ -0.56
BBS4-207ENST00000564239 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
BBS4-207ENST00000564239 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
BBS4-207ENST00000564239 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
BBS4-207ENST00000564239 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
BBS4-207ENST00000564239 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
BBS4-207ENST00000564239 SNPHO15079 494 aa11.49□□□□□ -0.57
BBS4-207ENST00000564239 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
BBS4-207ENST00000564239 DPYSL4O14531 572 aa11.46□□□□□ -0.57
BBS4-207ENST00000564239 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
BBS4-207ENST00000564239 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
BBS4-207ENST00000564239 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
BBS4-207ENST00000564239 ZNF710Q8N1W2 664 aa11.43□□□□□ -0.58
BBS4-207ENST00000564239 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
BBS4-207ENST00000564239 TBC1D12O60347 775 aa11.42□□□□□ -0.58
BBS4-207ENST00000564239 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
BBS4-207ENST00000564239 ARSIQ5FYB1 569 aa11.4□□□□□ -0.58
BBS4-207ENST00000564239 PDIA6Q15084 440 aa11.39□□□□□ -0.59
BBS4-207ENST00000564239 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
BBS4-207ENST00000564239 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.598e-8■■■□□ 15.4
BBS4-207ENST00000564239 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
BBS4-207ENST00000564239 EVI5O60447 810 aa11.37□□□□□ -0.59
BBS4-207ENST00000564239 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
BBS4-207ENST00000564239 NBR1Q14596 966 aa11.36□□□□□ -0.59
BBS4-207ENST00000564239 ST18O60284 1047 aa11.35□□□□□ -0.59
BBS4-207ENST00000564239 SEMA3EO15041 775 aa11.34□□□□□ -0.59
BBS4-207ENST00000564239 NUDT7P0C024 238 aa11.34□□□□□ -0.59
BBS4-207ENST00000564239 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
BBS4-207ENST00000564239 BCANQ96GW7 911 aa11.34□□□□□ -0.59
BBS4-207ENST00000564239 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
BBS4-207ENST00000564239 ZNF316A6NFI3 1004 aaPredicted RBP11.31□□□□□ -0.6
BBS4-207ENST00000564239 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
BBS4-207ENST00000564239 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
BBS4-207ENST00000564239 PTGER2P43116 358 aa11.29□□□□□ -0.6
BBS4-207ENST00000564239 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
BBS4-207ENST00000564239 DDX12PQ92771 950 aa11.26□□□□□ -0.61
BBS4-207ENST00000564239 LHX6Q9UPM6 363 aa11.26□□□□□ -0.61
BBS4-207ENST00000564239 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
BBS4-207ENST00000564239 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
BBS4-207ENST00000564239 EMP3P54852 163 aa11.22□□□□□ -0.61
BBS4-207ENST00000564239 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
BBS4-207ENST00000564239 PHF14O94880 888 aa11.21□□□□□ -0.61
BBS4-207ENST00000564239 FOSBP53539 338 aa11.21□□□□□ -0.61
BBS4-207ENST00000564239 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
BBS4-207ENST00000564239 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
BBS4-207ENST00000564239 ERBB3P21860 1342 aa11.19□□□□□ -0.62
BBS4-207ENST00000564239 PSDA5PKW4 1024 aaPredicted RBP11.19□□□□□ -0.62
BBS4-207ENST00000564239 OSBPP22059 807 aa11.19□□□□□ -0.62
BBS4-207ENST00000564239 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
BBS4-207ENST00000564239 EPAS1Q99814 870 aa11.18□□□□□ -0.62
BBS4-207ENST00000564239 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
BBS4-207ENST00000564239 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
BBS4-207ENST00000564239 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
BBS4-207ENST00000564239 VARS2Q5ST30 1063 aaKnown RBP11.16□□□□□ -0.62
BBS4-207ENST00000564239 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
BBS4-207ENST00000564239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
BBS4-207ENST00000564239 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
BBS4-207ENST00000564239 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
BBS4-207ENST00000564239 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
BBS4-207ENST00000564239 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
BBS4-207ENST00000564239 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
BBS4-207ENST00000564239 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
BBS4-207ENST00000564239 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
BBS4-207ENST00000564239 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
BBS4-207ENST00000564239 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
BBS4-207ENST00000564239 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
BBS4-207ENST00000564239 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
BBS4-207ENST00000564239 MAP3K7O43318 606 aa11.09□□□□□ -0.63
BBS4-207ENST00000564239 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
BBS4-207ENST00000564239 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
BBS4-207ENST00000564239 C6orf132Q5T0Z8 1188 aa11.07□□□□□ -0.64
BBS4-207ENST00000564239 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
BBS4-207ENST00000564239 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms