RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
NSMCE1-206ENST00000563900 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
NSMCE1-206ENST00000563900 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-206ENST00000563900 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
NSMCE1-206ENST00000563900 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
NSMCE1-206ENST00000563900 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
NSMCE1-206ENST00000563900 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
NSMCE1-206ENST00000563900 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
NSMCE1-206ENST00000563900 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
NSMCE1-206ENST00000563900 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-206ENST00000563900 KANK4Q5T7N3 995 aaPredicted RBP13.93□□□□□ -0.18
NSMCE1-206ENST00000563900 ABCC1P33527 1531 aa13.93□□□□□ -0.18
NSMCE1-206ENST00000563900 POGZQ7Z3K3 1410 aa13.92□□□□□ -0.18
NSMCE1-206ENST00000563900 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
NSMCE1-206ENST00000563900 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
NSMCE1-206ENST00000563900 SCAPERQ9BY12 1400 aa13.91□□□□□ -0.18
NSMCE1-206ENST00000563900 RAPGEF3O95398 923 aa13.91□□□□□ -0.18
NSMCE1-206ENST00000563900 SAMD9LQ8IVG5 1584 aa13.91□□□□□ -0.18
NSMCE1-206ENST00000563900 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
NSMCE1-206ENST00000563900 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
NSMCE1-206ENST00000563900 KDM5CP41229 1560 aa13.89□□□□□ -0.19
NSMCE1-206ENST00000563900 KIAA1107Q9UPP5 1409 aa13.88□□□□□ -0.19
NSMCE1-206ENST00000563900 ARHGEF40Q8TER5 1519 aa13.87□□□□□ -0.19
NSMCE1-206ENST00000563900 ZNF518AQ6AHZ1 1483 aa13.87□□□□□ -0.19
NSMCE1-206ENST00000563900 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
NSMCE1-206ENST00000563900 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
NSMCE1-206ENST00000563900 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-206ENST00000563900 TRAPPC8Q9Y2L5 1435 aa13.86□□□□□ -0.19
NSMCE1-206ENST00000563900 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
NSMCE1-206ENST00000563900 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
NSMCE1-206ENST00000563900 APLP2Q06481 763 aa13.84□□□□□ -0.19
NSMCE1-206ENST00000563900 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
NSMCE1-206ENST00000563900 MLH3Q9UHC1 1453 aa13.83□□□□□ -0.2
NSMCE1-206ENST00000563900 ZFYVE16Q7Z3T8 1539 aa13.83□□□□□ -0.2
NSMCE1-206ENST00000563900 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 YEATS2Q9ULM3 1422 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 HECW2Q9P2P5 1572 aa13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 ZNF644Q9H582 1327 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-206ENST00000563900 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-206ENST00000563900 ZNF777Q9ULD5 760 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-206ENST00000563900 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
NSMCE1-206ENST00000563900 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
NSMCE1-206ENST00000563900 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
NSMCE1-206ENST00000563900 INO80Q9ULG1 1556 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-206ENST00000563900 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
NSMCE1-206ENST00000563900 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
NSMCE1-206ENST00000563900 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-206ENST00000563900 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
NSMCE1-206ENST00000563900 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
NSMCE1-206ENST00000563900 ATP10AO60312 1499 aa13.76□□□□□ -0.21
NSMCE1-206ENST00000563900 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
NSMCE1-206ENST00000563900 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
NSMCE1-206ENST00000563900 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
NSMCE1-206ENST00000563900 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
NSMCE1-206ENST00000563900 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
NSMCE1-206ENST00000563900 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
NSMCE1-206ENST00000563900 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
NSMCE1-206ENST00000563900 SPAG9O60271 1321 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-206ENST00000563900 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
NSMCE1-206ENST00000563900 AGLP35573 1532 aa13.72□□□□□ -0.21
NSMCE1-206ENST00000563900 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
NSMCE1-206ENST00000563900 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
NSMCE1-206ENST00000563900 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.21
NSMCE1-206ENST00000563900 ADAMTSL3P82987 1691 aa13.71□□□□□ -0.21
NSMCE1-206ENST00000563900 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-206ENST00000563900 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
NSMCE1-206ENST00000563900 ABCC5O15440 1437 aa13.68□□□□□ -0.22
NSMCE1-206ENST00000563900 CROCC2H7BZ55 1655 aa13.68□□□□□ -0.22
NSMCE1-206ENST00000563900 ADGBQ8N7X0 1667 aa13.67□□□□□ -0.22
NSMCE1-206ENST00000563900 A2MP01023 1474 aa13.67□□□□□ -0.22
NSMCE1-206ENST00000563900 DAPK1P53355 1430 aa13.66□□□□□ -0.22
NSMCE1-206ENST00000563900 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
NSMCE1-206ENST00000563900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.64□□□□□ -0.23
NSMCE1-206ENST00000563900 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
NSMCE1-206ENST00000563900 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-206ENST00000563900 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-206ENST00000563900 TSPY4P0CV99 314 aa13.63□□□□□ -0.23
NSMCE1-206ENST00000563900 TSPY10P0CW01 314 aa13.63□□□□□ -0.23
NSMCE1-206ENST00000563900 PPARGC1BQ86YN6 1023 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-206ENST00000563900 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-206ENST00000563900 ADGRL2O95490 1459 aa13.61□□□□□ -0.23
NSMCE1-206ENST00000563900 PTPRMP28827 1452 aa13.61□□□□□ -0.23
NSMCE1-206ENST00000563900 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
NSMCE1-206ENST00000563900 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
NSMCE1-206ENST00000563900 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-206ENST00000563900 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
NSMCE1-206ENST00000563900 NCOA1Q15788 1441 aa13.57□□□□□ -0.24
NSMCE1-206ENST00000563900 MLECQ14165 292 aa13.57□□□□□ -0.24
NSMCE1-206ENST00000563900 FAM50AQ14320 339 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-206ENST00000563900 KIF15Q9NS87 1388 aa13.57□□□□□ -0.24
NSMCE1-206ENST00000563900 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-206ENST00000563900 RNF17Q9BXT8 1623 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-206ENST00000563900 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
NSMCE1-206ENST00000563900 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
NSMCE1-206ENST00000563900 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
NSMCE1-206ENST00000563900 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
NSMCE1-206ENST00000563900 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms