RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 RRBP1Q9P2E9 1410 aaKnown RBP23.51■■□□□ 1.35
PDXDC1-209ENST00000563667 TTC37Q6PGP7 1564 aa23.51■■□□□ 1.35
PDXDC1-209ENST00000563667 FAM50AQ14320 339 aaKnown RBP23.5■■□□□ 1.35
PDXDC1-209ENST00000563667 RAPGEF3O95398 923 aa23.49■■□□□ 1.35
PDXDC1-209ENST00000563667 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
PDXDC1-209ENST00000563667 FANCAO15360 1455 aa23.49■■□□□ 1.35
PDXDC1-209ENST00000563667 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
PDXDC1-209ENST00000563667 AKNAQ7Z591 1439 aa23.45■■□□□ 1.34
PDXDC1-209ENST00000563667 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
PDXDC1-209ENST00000563667 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-209ENST00000563667 PLCH2O75038 1416 aa23.43■■□□□ 1.34
PDXDC1-209ENST00000563667 CFDP1Q9UEE9 299 aaPredicted RBP23.43■■□□□ 1.34
PDXDC1-209ENST00000563667 MIA2Q96PC5 1412 aa23.42■■□□□ 1.34
PDXDC1-209ENST00000563667 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
PDXDC1-209ENST00000563667 ITGAEP38570 1179 aa23.41■■□□□ 1.34
PDXDC1-209ENST00000563667 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
PDXDC1-209ENST00000563667 ZNF777Q9ULD5 760 aaPredicted RBP23.4■■□□□ 1.34
PDXDC1-209ENST00000563667 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
PDXDC1-209ENST00000563667 PTPN23Q9H3S7 1636 aa23.4■■□□□ 1.34
PDXDC1-209ENST00000563667 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
PDXDC1-209ENST00000563667 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
PDXDC1-209ENST00000563667 ILDR1Q86SU0 546 aaPredicted RBP23.37■■□□□ 1.33
PDXDC1-209ENST00000563667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.36■■□□□ 1.33
PDXDC1-209ENST00000563667 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
PDXDC1-209ENST00000563667 ARHGAP5Q13017 1502 aa23.35■■□□□ 1.33
PDXDC1-209ENST00000563667 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
PDXDC1-209ENST00000563667 SCAPERQ9BY12 1400 aa23.34■■□□□ 1.33
PDXDC1-209ENST00000563667 TCOF1Q13428 1488 aaKnown RBP23.34■■□□□ 1.33
PDXDC1-209ENST00000563667 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
PDXDC1-209ENST00000563667 PREX2Q70Z35 1606 aa23.32■■□□□ 1.32
PDXDC1-209ENST00000563667 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
PDXDC1-209ENST00000563667 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
PDXDC1-209ENST00000563667 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
PDXDC1-209ENST00000563667 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
PDXDC1-209ENST00000563667 POGZQ7Z3K3 1410 aa23.27■■□□□ 1.32
PDXDC1-209ENST00000563667 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
PDXDC1-209ENST00000563667 ARHGEF40Q8TER5 1519 aa23.23■■□□□ 1.31
PDXDC1-209ENST00000563667 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
PDXDC1-209ENST00000563667 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
PDXDC1-209ENST00000563667 HNRNPMP52272 730 aaKnown RBP eCLIP23.21■■□□□ 1.31
PDXDC1-209ENST00000563667 MAGI2Q86UL8 1455 aa23.21■■□□□ 1.31
PDXDC1-209ENST00000563667 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
PDXDC1-209ENST00000563667 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
PDXDC1-209ENST00000563667 ZNF518AQ6AHZ1 1483 aa23.19■■□□□ 1.3
PDXDC1-209ENST00000563667 AFAP1Q8N556 730 aa23.19■■□□□ 1.3
PDXDC1-209ENST00000563667 PLEKHH2Q8IVE3 1493 aa23.18■■□□□ 1.3
PDXDC1-209ENST00000563667 DAPK1P53355 1430 aa23.18■■□□□ 1.3
PDXDC1-209ENST00000563667 CHIC2Q9UKJ5 165 aa23.18■■□□□ 1.3
PDXDC1-209ENST00000563667 ABCC5O15440 1437 aa23.17■■□□□ 1.3
PDXDC1-209ENST00000563667 PTPRKQ15262 1439 aa23.17■■□□□ 1.3
PDXDC1-209ENST00000563667 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
PDXDC1-209ENST00000563667 ABCC1P33527 1531 aa23.14■■□□□ 1.3
PDXDC1-209ENST00000563667 SYCP2Q9BX26 1530 aa23.13■■□□□ 1.29
PDXDC1-209ENST00000563667 RSPH4AQ5TD94 716 aa23.13■■□□□ 1.29
PDXDC1-209ENST00000563667 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
PDXDC1-209ENST00000563667 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
PDXDC1-209ENST00000563667 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
PDXDC1-209ENST00000563667 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
PDXDC1-209ENST00000563667 TRAPPC8Q9Y2L5 1435 aa23.11■■□□□ 1.29
PDXDC1-209ENST00000563667 ARHGEF12Q9NZN5 1544 aa23.11■■□□□ 1.29
PDXDC1-209ENST00000563667 ATP10AO60312 1499 aa23.11■■□□□ 1.29
PDXDC1-209ENST00000563667 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
PDXDC1-209ENST00000563667 CCDC141Q6ZP82 1450 aa23.1■■□□□ 1.29
PDXDC1-209ENST00000563667 KDM5CP41229 1560 aa23.1■■□□□ 1.29
PDXDC1-209ENST00000563667 MLECQ14165 292 aa23.09■■□□□ 1.29
PDXDC1-209ENST00000563667 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
PDXDC1-209ENST00000563667 C9orf84Q5VXU9 1444 aa23.08■■□□□ 1.29
PDXDC1-209ENST00000563667 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
PDXDC1-209ENST00000563667 ADAMTSL3P82987 1691 aa23.07■■□□□ 1.28
PDXDC1-209ENST00000563667 HECW2Q9P2P5 1572 aa23.07■■□□□ 1.28
PDXDC1-209ENST00000563667 SETD5Q9C0A6 1442 aa23.07■■□□□ 1.28
PDXDC1-209ENST00000563667 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
PDXDC1-209ENST00000563667 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
PDXDC1-209ENST00000563667 PTPRMP28827 1452 aa23.04■■□□□ 1.28
PDXDC1-209ENST00000563667 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
PDXDC1-209ENST00000563667 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
PDXDC1-209ENST00000563667 MADDQ8WXG6 1647 aa23.03■■□□□ 1.28
PDXDC1-209ENST00000563667 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
PDXDC1-209ENST00000563667 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
PDXDC1-209ENST00000563667 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
PDXDC1-209ENST00000563667 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
PDXDC1-209ENST00000563667 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
PDXDC1-209ENST00000563667 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
PDXDC1-209ENST00000563667 SIGLEC1Q9BZZ2 1709 aa23■■□□□ 1.27
PDXDC1-209ENST00000563667 DIP2CQ9Y2E4 1556 aa23■■□□□ 1.27
PDXDC1-209ENST00000563667 NAIPQ13075 1403 aa22.99■■□□□ 1.27
PDXDC1-209ENST00000563667 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
PDXDC1-209ENST00000563667 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
PDXDC1-209ENST00000563667 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
PDXDC1-209ENST00000563667 RIMS1Q86UR5 1692 aaKnown RBP22.97■■□□□ 1.27
PDXDC1-209ENST00000563667 MAST1Q9Y2H9 1570 aa22.96■■□□□ 1.27
PDXDC1-209ENST00000563667 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
PDXDC1-209ENST00000563667 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
PDXDC1-209ENST00000563667 KIDINS220Q9ULH0 1771 aa22.93■■□□□ 1.26
PDXDC1-209ENST00000563667 HRCP23327 699 aa22.92■■□□□ 1.26
PDXDC1-209ENST00000563667 REREQ9P2R6 1566 aa22.92■■□□□ 1.26
PDXDC1-209ENST00000563667 KIF15Q9NS87 1388 aa22.91■■□□□ 1.26
PDXDC1-209ENST00000563667 ATP7AQ04656 1500 aa22.91■■□□□ 1.26
PDXDC1-209ENST00000563667 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
PDXDC1-209ENST00000563667 RTEL1-TNFRSF6BF6WH68 1400 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms