RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
CDR2-203ENST00000563573 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
CDR2-203ENST00000563573 TMEM92Q6UXU6 159 aa10.02□□□□□ -0.81
CDR2-203ENST00000563573 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
CDR2-203ENST00000563573 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
CDR2-203ENST00000563573 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
CDR2-203ENST00000563573 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
CDR2-203ENST00000563573 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
CDR2-203ENST00000563573 KIF3CO14782 793 aa9.94□□□□□ -0.82
CDR2-203ENST00000563573 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
CDR2-203ENST00000563573 C2orf72A6NCS6 295 aa9.92□□□□□ -0.82
CDR2-203ENST00000563573 PPP1R37O75864 691 aa9.92□□□□□ -0.82
CDR2-203ENST00000563573 ERBB3P21860 1342 aa9.91□□□□□ -0.82
CDR2-203ENST00000563573 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
CDR2-203ENST00000563573 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
CDR2-203ENST00000563573 SLC34A2O95436 690 aa9.87□□□□□ -0.83
CDR2-203ENST00000563573 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
CDR2-203ENST00000563573 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
CDR2-203ENST00000563573 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
CDR2-203ENST00000563573 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
CDR2-203ENST00000563573 GPHNQ9NQX3 736 aaPredicted RBP9.84□□□□□ -0.83
CDR2-203ENST00000563573 FOXK1P85037 733 aa9.82□□□□□ -0.84
CDR2-203ENST00000563573 VARS2Q5ST30 1063 aaKnown RBP9.82□□□□□ -0.84
CDR2-203ENST00000563573 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
CDR2-203ENST00000563573 SPNS2Q8IVW8 549 aa9.8□□□□□ -0.84
CDR2-203ENST00000563573 ZNF316A6NFI3 1004 aaPredicted RBP9.79□□□□□ -0.84
CDR2-203ENST00000563573 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
CDR2-203ENST00000563573 PCDHGA4Q9Y5G9 962 aa9.79□□□□□ -0.84
CDR2-203ENST00000563573 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
CDR2-203ENST00000563573 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
CDR2-203ENST00000563573 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
CDR2-203ENST00000563573 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
CDR2-203ENST00000563573 TBC1D12O60347 775 aa9.77□□□□□ -0.85
CDR2-203ENST00000563573 PDE4AP27815 886 aa9.76□□□□□ -0.85
CDR2-203ENST00000563573 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CDR2-203ENST00000563573 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
CDR2-203ENST00000563573 NUDT7P0C024 238 aa9.74□□□□□ -0.85
CDR2-203ENST00000563573 DSG2Q14126 1118 aa9.74□□□□□ -0.85
CDR2-203ENST00000563573 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDR2-203ENST00000563573 MMRN1Q13201 1228 aa9.73□□□□□ -0.85
CDR2-203ENST00000563573 CRISPLD2Q9H0B8 497 aa9.73□□□□□ -0.85
CDR2-203ENST00000563573 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
CDR2-203ENST00000563573 PBX2P40425 430 aa9.69□□□□□ -0.86
CDR2-203ENST00000563573 LHX6Q9UPM6 363 aa9.69□□□□□ -0.86
CDR2-203ENST00000563573 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
CDR2-203ENST00000563573 PTGER2P43116 358 aa9.67□□□□□ -0.86
CDR2-203ENST00000563573 NCKAP5LQ9HCH0 1330 aa9.65□□□□□ -0.86
CDR2-203ENST00000563573 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
CDR2-203ENST00000563573 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
CDR2-203ENST00000563573 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
CDR2-203ENST00000563573 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
CDR2-203ENST00000563573 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
CDR2-203ENST00000563573 RTN4Q9NQC3 1192 aaKnown RBP9.63□□□□□ -0.87
CDR2-203ENST00000563573 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.874e-6■□□□□ 10.9
CDR2-203ENST00000563573 MFSD10Q14728 455 aa9.61□□□□□ -0.87
CDR2-203ENST00000563573 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
CDR2-203ENST00000563573 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
CDR2-203ENST00000563573 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDR2-203ENST00000563573 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
CDR2-203ENST00000563573 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
CDR2-203ENST00000563573 KCNH8Q96L42 1107 aa9.58□□□□□ -0.88
CDR2-203ENST00000563573 MYT1LQ9UL68 1186 aa9.58□□□□□ -0.88
CDR2-203ENST00000563573 RNF166Q96A37 237 aaPredicted RBP9.56□□□□□ -0.88
CDR2-203ENST00000563573 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
CDR2-203ENST00000563573 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
CDR2-203ENST00000563573 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
CDR2-203ENST00000563573 CADPS2Q86UW7 1296 aa9.53□□□□□ -0.88
CDR2-203ENST00000563573 AXIN2Q9Y2T1 843 aa9.53□□□□□ -0.88
CDR2-203ENST00000563573 TK2O00142 265 aa9.52□□□□□ -0.89
CDR2-203ENST00000563573 EVI5O60447 810 aa9.52□□□□□ -0.89
CDR2-203ENST00000563573 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
CDR2-203ENST00000563573 FOSBP53539 338 aa9.5□□□□□ -0.89
CDR2-203ENST00000563573 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CDR2-203ENST00000563573 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
CDR2-203ENST00000563573 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
CDR2-203ENST00000563573 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
CDR2-203ENST00000563573 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
CDR2-203ENST00000563573 PTPREP23469 700 aa9.46□□□□□ -0.9
CDR2-203ENST00000563573 PSEN2P49810 448 aa9.46□□□□□ -0.9
CDR2-203ENST00000563573 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
CDR2-203ENST00000563573 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
CDR2-203ENST00000563573 KCNK17Q96T54 332 aa9.46□□□□□ -0.9
CDR2-203ENST00000563573 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
CDR2-203ENST00000563573 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
CDR2-203ENST00000563573 DMRTA1Q5VZB9 504 aa9.44□□□□□ -0.9
CDR2-203ENST00000563573 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
CDR2-203ENST00000563573 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
CDR2-203ENST00000563573 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
CDR2-203ENST00000563573 HRO43593 1189 aa9.41□□□□□ -0.9
CDR2-203ENST00000563573 PHF14O94880 888 aa9.4□□□□□ -0.9
CDR2-203ENST00000563573 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
CDR2-203ENST00000563573 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
CDR2-203ENST00000563573 DPYSL4O14531 572 aa9.38□□□□□ -0.91
CDR2-203ENST00000563573 EPAS1Q99814 870 aa9.38□□□□□ -0.91
CDR2-203ENST00000563573 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
CDR2-203ENST00000563573 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
CDR2-203ENST00000563573 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
CDR2-203ENST00000563573 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
CDR2-203ENST00000563573 E2F4Q16254 413 aa9.36□□□□□ -0.91
CDR2-203ENST00000563573 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms