RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
RPUSD1-204ENST00000563560 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
RPUSD1-204ENST00000563560 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
RPUSD1-204ENST00000563560 ARHGAP5Q13017 1502 aa23.83■■□□□ 1.41
RPUSD1-204ENST00000563560 VPS8Q8N3P4 1428 aa23.83■■□□□ 1.4
RPUSD1-204ENST00000563560 KDM5CP41229 1560 aa23.82■■□□□ 1.4
RPUSD1-204ENST00000563560 SCAPERQ9BY12 1400 aa23.82■■□□□ 1.4
RPUSD1-204ENST00000563560 ABCC1P33527 1531 aa23.81■■□□□ 1.4
RPUSD1-204ENST00000563560 EHBP1L1Q8N3D4 1523 aa23.8■■□□□ 1.4
RPUSD1-204ENST00000563560 ARHGEF12Q9NZN5 1544 aa23.8■■□□□ 1.4
RPUSD1-204ENST00000563560 GPATCH8Q9UKJ3 1502 aaKnown RBP23.8■■□□□ 1.4
RPUSD1-204ENST00000563560 ITSN2Q9NZM3 1697 aa23.8■■□□□ 1.4
RPUSD1-204ENST00000563560 TIAM1Q13009 1591 aa23.8■■□□□ 1.4
RPUSD1-204ENST00000563560 EFCAB2Q5VUJ9 269 aa23.79■■□□□ 1.4
RPUSD1-204ENST00000563560 SAMD9LQ8IVG5 1584 aa23.78■■□□□ 1.4
RPUSD1-204ENST00000563560 MAGI2Q86UL8 1455 aa23.77■■□□□ 1.4
RPUSD1-204ENST00000563560 ADAMTSL3P82987 1691 aa23.76■■□□□ 1.39
RPUSD1-204ENST00000563560 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
RPUSD1-204ENST00000563560 ZFYVE16Q7Z3T8 1539 aa23.75■■□□□ 1.39
RPUSD1-204ENST00000563560 BCORL1Q5H9F3 1711 aa23.75■■□□□ 1.39
RPUSD1-204ENST00000563560 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
RPUSD1-204ENST00000563560 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
RPUSD1-204ENST00000563560 MAP3K1Q13233 1512 aa23.73■■□□□ 1.39
RPUSD1-204ENST00000563560 MTUS2Q5JR59 1369 aa23.71■■□□□ 1.39
RPUSD1-204ENST00000563560 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
RPUSD1-204ENST00000563560 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
RPUSD1-204ENST00000563560 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
RPUSD1-204ENST00000563560 KIDINS220Q9ULH0 1771 aa23.67■■□□□ 1.38
RPUSD1-204ENST00000563560 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
RPUSD1-204ENST00000563560 ABCA6Q8N139 1617 aa23.66■■□□□ 1.38
RPUSD1-204ENST00000563560 DIP2CQ9Y2E4 1556 aa23.66■■□□□ 1.38
RPUSD1-204ENST00000563560 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
RPUSD1-204ENST00000563560 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
RPUSD1-204ENST00000563560 NCOA2Q15596 1464 aa23.65■■□□□ 1.38
RPUSD1-204ENST00000563560 REREQ9P2R6 1566 aa23.65■■□□□ 1.38
RPUSD1-204ENST00000563560 AFAP1Q8N556 730 aa23.64■■□□□ 1.37
RPUSD1-204ENST00000563560 KIAA1107Q9UPP5 1409 aa23.63■■□□□ 1.37
RPUSD1-204ENST00000563560 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
RPUSD1-204ENST00000563560 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
RPUSD1-204ENST00000563560 ATP10AO60312 1499 aa23.62■■□□□ 1.37
RPUSD1-204ENST00000563560 INO80Q9ULG1 1556 aaPredicted RBP23.59■■□□□ 1.37
RPUSD1-204ENST00000563560 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
RPUSD1-204ENST00000563560 MBD5Q9P267 1494 aa23.58■■□□□ 1.37
RPUSD1-204ENST00000563560 PLEKHH2Q8IVE3 1493 aa23.57■■□□□ 1.36
RPUSD1-204ENST00000563560 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
RPUSD1-204ENST00000563560 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
RPUSD1-204ENST00000563560 PTPRMP28827 1452 aa23.54■■□□□ 1.36
RPUSD1-204ENST00000563560 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
RPUSD1-204ENST00000563560 ZNF644Q9H582 1327 aaPredicted RBP23.53■■□□□ 1.36
RPUSD1-204ENST00000563560 AGLP35573 1532 aa23.52■■□□□ 1.36
RPUSD1-204ENST00000563560 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
RPUSD1-204ENST00000563560 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
RPUSD1-204ENST00000563560 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.35
RPUSD1-204ENST00000563560 CAMSAP2Q08AD1 1489 aa23.49■■□□□ 1.35
RPUSD1-204ENST00000563560 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
RPUSD1-204ENST00000563560 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
RPUSD1-204ENST00000563560 ARHGEF5Q12774 1597 aa23.47■■□□□ 1.35
RPUSD1-204ENST00000563560 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
RPUSD1-204ENST00000563560 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
RPUSD1-204ENST00000563560 MYOM3Q5VTT5 1437 aa23.42■■□□□ 1.34
RPUSD1-204ENST00000563560 CCDC141Q6ZP82 1450 aa23.41■■□□□ 1.34
RPUSD1-204ENST00000563560 RTEL1-TNFRSF6BF6WH68 1400 aa23.41■■□□□ 1.34
RPUSD1-204ENST00000563560 MIA2Q96PC5 1412 aa23.41■■□□□ 1.34
RPUSD1-204ENST00000563560 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
RPUSD1-204ENST00000563560 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
RPUSD1-204ENST00000563560 A2MP01023 1474 aa23.36■■□□□ 1.33
RPUSD1-204ENST00000563560 C3P01024 1663 aa23.33■■□□□ 1.33
RPUSD1-204ENST00000563560 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.32
RPUSD1-204ENST00000563560 CROCC2H7BZ55 1655 aa23.32■■□□□ 1.32
RPUSD1-204ENST00000563560 MLECQ14165 292 aa23.32■■□□□ 1.32
RPUSD1-204ENST00000563560 MROH2AA6NES4 1674 aa23.31■■□□□ 1.32
RPUSD1-204ENST00000563560 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
RPUSD1-204ENST00000563560 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
RPUSD1-204ENST00000563560 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
RPUSD1-204ENST00000563560 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
RPUSD1-204ENST00000563560 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.32
RPUSD1-204ENST00000563560 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
RPUSD1-204ENST00000563560 DHX29Q7Z478 1369 aaKnown RBP23.26■■□□□ 1.31
RPUSD1-204ENST00000563560 PREX1Q8TCU6 1659 aa23.24■■□□□ 1.31
RPUSD1-204ENST00000563560 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
RPUSD1-204ENST00000563560 APLP2Q06481 763 aa23.23■■□□□ 1.31
RPUSD1-204ENST00000563560 ABCC5O15440 1437 aa23.22■■□□□ 1.31
RPUSD1-204ENST00000563560 SHANK2Q9UPX8 1470 aa23.22■■□□□ 1.31
RPUSD1-204ENST00000563560 SETD1BQ9UPS6 1966 aaKnown RBP23.21■■□□□ 1.31
RPUSD1-204ENST00000563560 CNTLNQ9NXG0 1405 aa23.2■■□□□ 1.3
RPUSD1-204ENST00000563560 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
RPUSD1-204ENST00000563560 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
RPUSD1-204ENST00000563560 CEBPAP49715 358 aaPredicted RBP23.18■■□□□ 1.3
RPUSD1-204ENST00000563560 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
RPUSD1-204ENST00000563560 DAPK1P53355 1430 aa23.16■■□□□ 1.3
RPUSD1-204ENST00000563560 FAM135AQ9P2D6 1515 aa23.15■■□□□ 1.3
RPUSD1-204ENST00000563560 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
RPUSD1-204ENST00000563560 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
RPUSD1-204ENST00000563560 DUOX2Q9NRD8 1548 aa23.11■■□□□ 1.29
RPUSD1-204ENST00000563560 ZMYM3Q14202 1370 aa23.11■■□□□ 1.29
RPUSD1-204ENST00000563560 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
RPUSD1-204ENST00000563560 NPATQ14207 1427 aa23.09■■□□□ 1.29
RPUSD1-204ENST00000563560 KDM5DQ9BY66 1539 aa23.08■■□□□ 1.29
RPUSD1-204ENST00000563560 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
RPUSD1-204ENST00000563560 DEPDC5O75140 1603 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms