RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 APLP2Q06481 763 aa22.14■■□□□ 1.13
AC009163.3-201ENST00000563554 ARHGAP5Q13017 1502 aa22.13■■□□□ 1.13
AC009163.3-201ENST00000563554 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
AC009163.3-201ENST00000563554 MSH5O43196 834 aa22.12■■□□□ 1.13
AC009163.3-201ENST00000563554 FANCAO15360 1455 aa22.1■■□□□ 1.13
AC009163.3-201ENST00000563554 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
AC009163.3-201ENST00000563554 NEO1Q92859 1461 aa22.09■■□□□ 1.13
AC009163.3-201ENST00000563554 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
AC009163.3-201ENST00000563554 PLCH2O75038 1416 aa22.08■■□□□ 1.13
AC009163.3-201ENST00000563554 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
AC009163.3-201ENST00000563554 CCNB3Q8WWL7 1395 aa22.04■■□□□ 1.12
AC009163.3-201ENST00000563554 GPATCH8Q9UKJ3 1502 aaKnown RBP22.03■■□□□ 1.12
AC009163.3-201ENST00000563554 ABCC1P33527 1531 aa22.02■■□□□ 1.12
AC009163.3-201ENST00000563554 FRMPD1Q5SYB0 1578 aa22.02■■□□□ 1.12
AC009163.3-201ENST00000563554 ADGRL1O94910 1474 aa22.01■■□□□ 1.11
AC009163.3-201ENST00000563554 AKNAQ7Z591 1439 aa22■■□□□ 1.11
AC009163.3-201ENST00000563554 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
AC009163.3-201ENST00000563554 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
AC009163.3-201ENST00000563554 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
AC009163.3-201ENST00000563554 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
AC009163.3-201ENST00000563554 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
AC009163.3-201ENST00000563554 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
AC009163.3-201ENST00000563554 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
AC009163.3-201ENST00000563554 CAMSAP2Q08AD1 1489 aa21.92■■□□□ 1.1
AC009163.3-201ENST00000563554 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
AC009163.3-201ENST00000563554 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
AC009163.3-201ENST00000563554 PLEKHH2Q8IVE3 1493 aa21.9■■□□□ 1.1
AC009163.3-201ENST00000563554 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
AC009163.3-201ENST00000563554 KDM5CP41229 1560 aa21.9■■□□□ 1.1
AC009163.3-201ENST00000563554 HECW2Q9P2P5 1572 aa21.9■■□□□ 1.1
AC009163.3-201ENST00000563554 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
AC009163.3-201ENST00000563554 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
AC009163.3-201ENST00000563554 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
AC009163.3-201ENST00000563554 PPARGC1BQ86YN6 1023 aaKnown RBP21.87■■□□□ 1.09
AC009163.3-201ENST00000563554 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
AC009163.3-201ENST00000563554 ARHGEF40Q8TER5 1519 aa21.86■■□□□ 1.09
AC009163.3-201ENST00000563554 ARHGEF12Q9NZN5 1544 aa21.86■■□□□ 1.09
AC009163.3-201ENST00000563554 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
AC009163.3-201ENST00000563554 ARHGEF5Q12774 1597 aa21.84■■□□□ 1.09
AC009163.3-201ENST00000563554 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
AC009163.3-201ENST00000563554 INO80Q9ULG1 1556 aaPredicted RBP21.83■■□□□ 1.09
AC009163.3-201ENST00000563554 FGD6Q6ZV73 1430 aa21.83■■□□□ 1.09
AC009163.3-201ENST00000563554 ZFYVE16Q7Z3T8 1539 aa21.82■■□□□ 1.08
AC009163.3-201ENST00000563554 ABCA6Q8N139 1617 aa21.81■■□□□ 1.08
AC009163.3-201ENST00000563554 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
AC009163.3-201ENST00000563554 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
AC009163.3-201ENST00000563554 ADGBQ8N7X0 1667 aa21.8■■□□□ 1.08
AC009163.3-201ENST00000563554 RAPGEF3O95398 923 aa21.8■■□□□ 1.08
AC009163.3-201ENST00000563554 TRAPPC8Q9Y2L5 1435 aa21.8■■□□□ 1.08
AC009163.3-201ENST00000563554 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
AC009163.3-201ENST00000563554 ZNF644Q9H582 1327 aaPredicted RBP21.78■■□□□ 1.08
AC009163.3-201ENST00000563554 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.08
AC009163.3-201ENST00000563554 ATP7AQ04656 1500 aa21.77■■□□□ 1.08
AC009163.3-201ENST00000563554 DIP2CQ9Y2E4 1556 aa21.77■■□□□ 1.08
AC009163.3-201ENST00000563554 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
AC009163.3-201ENST00000563554 MBD5Q9P267 1494 aa21.76■■□□□ 1.07
AC009163.3-201ENST00000563554 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
AC009163.3-201ENST00000563554 PIAS4Q8N2W9 510 aaPredicted RBP21.75■■□□□ 1.07
AC009163.3-201ENST00000563554 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
AC009163.3-201ENST00000563554 MLH3Q9UHC1 1453 aa21.72■■□□□ 1.07
AC009163.3-201ENST00000563554 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.07
AC009163.3-201ENST00000563554 YEATS2Q9ULM3 1422 aa21.71■■□□□ 1.07
AC009163.3-201ENST00000563554 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
AC009163.3-201ENST00000563554 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
AC009163.3-201ENST00000563554 REREQ9P2R6 1566 aa21.68■■□□□ 1.06
AC009163.3-201ENST00000563554 SHANK2Q9UPX8 1470 aa21.67■■□□□ 1.06
AC009163.3-201ENST00000563554 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
AC009163.3-201ENST00000563554 DAPK1P53355 1430 aa21.65■■□□□ 1.06
AC009163.3-201ENST00000563554 BCORL1Q5H9F3 1711 aa21.65■■□□□ 1.06
AC009163.3-201ENST00000563554 C9orf84Q5VXU9 1444 aa21.64■■□□□ 1.06
AC009163.3-201ENST00000563554 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.05
AC009163.3-201ENST00000563554 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
AC009163.3-201ENST00000563554 FER1L4A9Z1Z3 1794 aa21.63■■□□□ 1.05
AC009163.3-201ENST00000563554 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
AC009163.3-201ENST00000563554 ATP10AO60312 1499 aa21.62■■□□□ 1.05
AC009163.3-201ENST00000563554 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
AC009163.3-201ENST00000563554 RSPH4AQ5TD94 716 aa21.61■■□□□ 1.05
AC009163.3-201ENST00000563554 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
AC009163.3-201ENST00000563554 ABCC5O15440 1437 aa21.6■■□□□ 1.05
AC009163.3-201ENST00000563554 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
AC009163.3-201ENST00000563554 EIF2AK4Q9P2K8 1649 aaKnown RBP21.58■■□□□ 1.04
AC009163.3-201ENST00000563554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.04
AC009163.3-201ENST00000563554 TSPY4P0CV99 314 aa21.55■■□□□ 1.04
AC009163.3-201ENST00000563554 TSPY10P0CW01 314 aa21.55■■□□□ 1.04
AC009163.3-201ENST00000563554 A2MP01023 1474 aa21.55■■□□□ 1.04
AC009163.3-201ENST00000563554 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
AC009163.3-201ENST00000563554 RIMS1Q86UR5 1692 aaKnown RBP21.54■■□□□ 1.04
AC009163.3-201ENST00000563554 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
AC009163.3-201ENST00000563554 MADDQ8WXG6 1647 aa21.54■■□□□ 1.04
AC009163.3-201ENST00000563554 AGLP35573 1532 aa21.54■■□□□ 1.04
AC009163.3-201ENST00000563554 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
AC009163.3-201ENST00000563554 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
AC009163.3-201ENST00000563554 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
AC009163.3-201ENST00000563554 ARID4BQ4LE39 1312 aaPredicted RBP21.5■■□□□ 1.03
AC009163.3-201ENST00000563554 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
AC009163.3-201ENST00000563554 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
AC009163.3-201ENST00000563554 CEP152O94986 1710 aa21.46■■□□□ 1.03
AC009163.3-201ENST00000563554 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
AC009163.3-201ENST00000563554 KIF15Q9NS87 1388 aa21.46■■□□□ 1.03
AC009163.3-201ENST00000563554 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms