RNA–Protein interactions for RNA: ENST00000563364.2

NIP7-205, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2

Gene NIP7, Length 436 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-205ENST00000563364 TROQ12816 1431 aaPredicted RBP33.86■■■■□ 3.01
NIP7-205ENST00000563364 YEATS2Q9ULM3 1422 aa33.86■■■■□ 3.01
NIP7-205ENST00000563364 EFCAB2Q5VUJ9 269 aa33.85■■■■□ 3.01
NIP7-205ENST00000563364 KIF14Q15058 1648 aa33.84■■■■□ 3.01
NIP7-205ENST00000563364 RIMS1Q86UR5 1692 aaKnown RBP33.81■■■■□ 3
NIP7-205ENST00000563364 LRRIQ1Q96JM4 1722 aa33.81■■■■□ 3
NIP7-205ENST00000563364 CLIP1P30622 1438 aa33.8■■■■□ 3
NIP7-205ENST00000563364 SIGLEC1Q9BZZ2 1709 aa33.79■■■■□ 3
NIP7-205ENST00000563364 PCF11O94913 1555 aaKnown RBP33.77■■■■□ 3
NIP7-205ENST00000563364 LMTK3Q96Q04 1460 aa33.73■■■□□ 2.99
NIP7-205ENST00000563364 CASKIN1Q8WXD9 1431 aa33.72■■■□□ 2.99
NIP7-205ENST00000563364 ATP10AO60312 1499 aa33.72■■■□□ 2.99
NIP7-205ENST00000563364 ARHGAP5Q13017 1502 aa33.71■■■□□ 2.99
NIP7-205ENST00000563364 CCDC18Q5T9S5 1454 aa33.7■■■□□ 2.99
NIP7-205ENST00000563364 ZNF518AQ6AHZ1 1483 aa33.7■■■□□ 2.99
NIP7-205ENST00000563364 C9orf84Q5VXU9 1444 aa33.68■■■□□ 2.98
NIP7-205ENST00000563364 KDM5CP41229 1560 aa33.66■■■□□ 2.98
NIP7-205ENST00000563364 FER1L4A9Z1Z3 1794 aa33.65■■■□□ 2.98
NIP7-205ENST00000563364 CDC42BPBQ9Y5S2 1711 aa33.65■■■□□ 2.98
NIP7-205ENST00000563364 MLECQ14165 292 aa33.62■■■□□ 2.97
NIP7-205ENST00000563364 ARHGEF12Q9NZN5 1544 aa33.62■■■□□ 2.97
NIP7-205ENST00000563364 AFAP1Q8N556 730 aa33.6■■■□□ 2.97
NIP7-205ENST00000563364 PREX2Q70Z35 1606 aa33.6■■■□□ 2.97
NIP7-205ENST00000563364 FYCO1Q9BQS8 1478 aa33.59■■■□□ 2.97
NIP7-205ENST00000563364 MLH3Q9UHC1 1453 aa33.54■■■□□ 2.96
NIP7-205ENST00000563364 PLPPR3Q6T4P5 718 aa33.53■■■□□ 2.96
NIP7-205ENST00000563364 ABCC1P33527 1531 aa33.53■■■□□ 2.96
NIP7-205ENST00000563364 REREQ9P2R6 1566 aa33.52■■■□□ 2.96
NIP7-205ENST00000563364 DIP2CQ9Y2E4 1556 aa33.51■■■□□ 2.96
NIP7-205ENST00000563364 CDC42BPAQ5VT25 1732 aa33.49■■■□□ 2.95
NIP7-205ENST00000563364 FBXO41Q8TF61 875 aa33.49■■■□□ 2.95
NIP7-205ENST00000563364 MYT1LQ9UL68 1186 aa33.48■■■□□ 2.95
NIP7-205ENST00000563364 ITSN2Q9NZM3 1697 aa33.48■■■□□ 2.95
NIP7-205ENST00000563364 TRAPPC8Q9Y2L5 1435 aa33.47■■■□□ 2.95
NIP7-205ENST00000563364 HSPA2P54652 639 aa33.47■■■□□ 2.95
NIP7-205ENST00000563364 ABCA6Q8N139 1617 aa33.46■■■□□ 2.95
NIP7-205ENST00000563364 AGLP35573 1532 aa33.41■■■□□ 2.94
NIP7-205ENST00000563364 PREX1Q8TCU6 1659 aa33.39■■■□□ 2.94
NIP7-205ENST00000563364 KIDINS220Q9ULH0 1771 aa33.37■■■□□ 2.93
NIP7-205ENST00000563364 CEBPAP49715 358 aaPredicted RBP33.36■■■□□ 2.93
NIP7-205ENST00000563364 GPATCH8Q9UKJ3 1502 aaKnown RBP33.36■■■□□ 2.93
NIP7-205ENST00000563364 SETD1BQ9UPS6 1966 aaKnown RBP33.35■■■□□ 2.93
NIP7-205ENST00000563364 SAMD9LQ8IVG5 1584 aa33.34■■■□□ 2.93
NIP7-205ENST00000563364 ZNF777Q9ULD5 760 aaPredicted RBP33.29■■■□□ 2.92
NIP7-205ENST00000563364 SYCP2Q9BX26 1530 aa33.28■■■□□ 2.92
NIP7-205ENST00000563364 KIAA1107Q9UPP5 1409 aa33.27■■■□□ 2.92
NIP7-205ENST00000563364 UHRF1BP1Q6BDS2 1440 aa33.26■■■□□ 2.91
NIP7-205ENST00000563364 C3P01024 1663 aa33.26■■■□□ 2.91
NIP7-205ENST00000563364 PLEKHH2Q8IVE3 1493 aa33.25■■■□□ 2.91
NIP7-205ENST00000563364 ESF1Q9H501 851 aaKnown RBP33.24■■■□□ 2.91
NIP7-205ENST00000563364 MTUS2Q5JR59 1369 aa33.23■■■□□ 2.91
NIP7-205ENST00000563364 CCNB3Q8WWL7 1395 aa33.23■■■□□ 2.91
NIP7-205ENST00000563364 CFDP1Q9UEE9 299 aaPredicted RBP33.23■■■□□ 2.91
NIP7-205ENST00000563364 SPAG9O60271 1321 aaKnown RBP33.23■■■□□ 2.91
NIP7-205ENST00000563364 CNTLNQ9NXG0 1405 aa33.22■■■□□ 2.91
NIP7-205ENST00000563364 HNRNPMP52272 730 aaKnown RBP eCLIP33.22■■■□□ 2.91
NIP7-205ENST00000563364 ATP7AQ04656 1500 aa33.17■■■□□ 2.9
NIP7-205ENST00000563364 STRCQ7RTU9 1775 aa33.16■■■□□ 2.9
NIP7-205ENST00000563364 DMRT2Q9Y5R5 561 aa33.16■■■□□ 2.9
NIP7-205ENST00000563364 INO80Q9ULG1 1556 aaPredicted RBP33.15■■■□□ 2.9
NIP7-205ENST00000563364 EHBP1L1Q8N3D4 1523 aa33.14■■■□□ 2.9
NIP7-205ENST00000563364 CERKQ8TCT0 537 aa33.14■■■□□ 2.9
NIP7-205ENST00000563364 CEP162Q5TB80 1403 aa33.12■■■□□ 2.89
NIP7-205ENST00000563364 MROH2AA6NES4 1674 aa33.12■■■□□ 2.89
NIP7-205ENST00000563364 TIAM1Q13009 1591 aa33.11■■■□□ 2.89
NIP7-205ENST00000563364 PLXNC1O60486 1568 aa33.1■■■□□ 2.89
NIP7-205ENST00000563364 SUPT6HQ7KZ85 1726 aaKnown RBP33.1■■■□□ 2.89
NIP7-205ENST00000563364 A2MP01023 1474 aa33.08■■■□□ 2.89
NIP7-205ENST00000563364 NPATQ14207 1427 aa33.06■■■□□ 2.88
NIP7-205ENST00000563364 ZMYM3Q14202 1370 aa33.04■■■□□ 2.88
NIP7-205ENST00000563364 MBD5Q9P267 1494 aa33.03■■■□□ 2.88
NIP7-205ENST00000563364 PTPRTO14522 1441 aa33.02■■■□□ 2.88
NIP7-205ENST00000563364 ZNF644Q9H582 1327 aaPredicted RBP33.02■■■□□ 2.88
NIP7-205ENST00000563364 ADGBQ8N7X0 1667 aa33.01■■■□□ 2.88
NIP7-205ENST00000563364 RTEL1-TNFRSF6BF6WH68 1400 aa32.98■■■□□ 2.87
NIP7-205ENST00000563364 CLTCQ00610 1675 aaKnown RBP32.97■■■□□ 2.87
NIP7-205ENST00000563364 PPP6R1Q9UPN7 881 aa32.96■■■□□ 2.87
NIP7-205ENST00000563364 NCOA1Q15788 1441 aa32.94■■■□□ 2.86
NIP7-205ENST00000563364 GGT6Q6P531 493 aa32.92■■■□□ 2.86
NIP7-205ENST00000563364 NCOA2Q15596 1464 aa32.92■■■□□ 2.86
NIP7-205ENST00000563364 PTPRKQ15262 1439 aa32.88■■■□□ 2.85
NIP7-205ENST00000563364 RSPH4AQ5TD94 716 aa32.88■■■□□ 2.85
NIP7-205ENST00000563364 DHX29Q7Z478 1369 aaKnown RBP32.87■■■□□ 2.85
NIP7-205ENST00000563364 CAMSAP1Q5T5Y3 1602 aa32.87■■■□□ 2.85
NIP7-205ENST00000563364 CCDC141Q6ZP82 1450 aa32.86■■■□□ 2.85
NIP7-205ENST00000563364 CAMSAP2Q08AD1 1489 aa32.85■■■□□ 2.85
NIP7-205ENST00000563364 ZNF142P52746 1687 aaPredicted RBP32.85■■■□□ 2.85
NIP7-205ENST00000563364 MYO3AQ8NEV4 1616 aa32.84■■■□□ 2.85
NIP7-205ENST00000563364 VPS8Q8N3P4 1428 aa32.81■■■□□ 2.84
NIP7-205ENST00000563364 LTBP4Q8N2S1 1624 aa32.8■■■□□ 2.84
NIP7-205ENST00000563364 PLA2R1Q13018 1463 aa32.78■■■□□ 2.84
NIP7-205ENST00000563364 CEP170BQ9Y4F5 1589 aaPredicted RBP32.78■■■□□ 2.84
NIP7-205ENST00000563364 ARHGEF5Q12774 1597 aa32.77■■■□□ 2.84
NIP7-205ENST00000563364 LRRC9Q6ZRR7 1453 aa32.76■■■□□ 2.84
NIP7-205ENST00000563364 FAM135AQ9P2D6 1515 aa32.76■■■□□ 2.83
NIP7-205ENST00000563364 IQSEC2Q5JU85 1478 aa32.74■■■□□ 2.83
NIP7-205ENST00000563364 LOC105371045A0A1W2PR82 267 aa32.73■■■□□ 2.83
NIP7-205ENST00000563364 KIF3BO15066 747 aa32.73■■■□□ 2.83
NIP7-205ENST00000563364 PKD2Q13563 968 aa32.73■■■□□ 2.83
NIP7-205ENST00000563364 NCKAP5LQ9HCH0 1330 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms