RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 EFCAB2Q5VUJ9 269 aa28.23■■■□□ 2.11
TSC2-219ENST00000563346 LRRIQ1Q96JM4 1722 aa28.23■■■□□ 2.11
TSC2-219ENST00000563346 MADDQ8WXG6 1647 aa28.22■■■□□ 2.11
TSC2-219ENST00000563346 MAGI2Q86UL8 1455 aa28.21■■■□□ 2.11
TSC2-219ENST00000563346 POGZQ7Z3K3 1410 aa28.2■■■□□ 2.11
TSC2-219ENST00000563346 FBXO41Q8TF61 875 aa28.2■■■□□ 2.1
TSC2-219ENST00000563346 YEATS2Q9ULM3 1422 aa28.18■■■□□ 2.1
TSC2-219ENST00000563346 PCF11O94913 1555 aaKnown RBP28.18■■■□□ 2.1
TSC2-219ENST00000563346 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
TSC2-219ENST00000563346 ARHGAP5Q13017 1502 aa28.17■■■□□ 2.1
TSC2-219ENST00000563346 CCDC18Q5T9S5 1454 aa28.16■■■□□ 2.1
TSC2-219ENST00000563346 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.1
TSC2-219ENST00000563346 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
TSC2-219ENST00000563346 SIGLEC1Q9BZZ2 1709 aa28.09■■■□□ 2.09
TSC2-219ENST00000563346 ZNF518AQ6AHZ1 1483 aa28.08■■■□□ 2.09
TSC2-219ENST00000563346 FYCO1Q9BQS8 1478 aa28.08■■■□□ 2.09
TSC2-219ENST00000563346 MLECQ14165 292 aa28.07■■■□□ 2.08
TSC2-219ENST00000563346 ATP10AO60312 1499 aa28.06■■■□□ 2.08
TSC2-219ENST00000563346 MYT1LQ9UL68 1186 aa28.05■■■□□ 2.08
TSC2-219ENST00000563346 CDC42BPBQ9Y5S2 1711 aa28.05■■■□□ 2.08
TSC2-219ENST00000563346 C9orf84Q5VXU9 1444 aa28.04■■■□□ 2.08
TSC2-219ENST00000563346 PREX2Q70Z35 1606 aa28.03■■■□□ 2.08
TSC2-219ENST00000563346 AFAP1Q8N556 730 aa28.02■■■□□ 2.08
TSC2-219ENST00000563346 LMTK3Q96Q04 1460 aa28.02■■■□□ 2.08
TSC2-219ENST00000563346 KDM5CP41229 1560 aa28■■■□□ 2.07
TSC2-219ENST00000563346 FER1L4A9Z1Z3 1794 aa28■■■□□ 2.07
TSC2-219ENST00000563346 HSPA2P54652 639 aa27.99■■■□□ 2.07
TSC2-219ENST00000563346 ABCC1P33527 1531 aa27.95■■■□□ 2.06
TSC2-219ENST00000563346 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.06
TSC2-219ENST00000563346 ARHGEF12Q9NZN5 1544 aa27.92■■■□□ 2.06
TSC2-219ENST00000563346 ITSN2Q9NZM3 1697 aa27.92■■■□□ 2.06
TSC2-219ENST00000563346 DIP2CQ9Y2E4 1556 aa27.91■■■□□ 2.06
TSC2-219ENST00000563346 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
TSC2-219ENST00000563346 MLH3Q9UHC1 1453 aa27.9■■■□□ 2.06
TSC2-219ENST00000563346 ZNF777Q9ULD5 760 aaPredicted RBP27.89■■■□□ 2.06
TSC2-219ENST00000563346 ABCA6Q8N139 1617 aa27.87■■■□□ 2.05
TSC2-219ENST00000563346 REREQ9P2R6 1566 aa27.86■■■□□ 2.05
TSC2-219ENST00000563346 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
TSC2-219ENST00000563346 MTUS2Q5JR59 1369 aa27.83■■■□□ 2.05
TSC2-219ENST00000563346 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
TSC2-219ENST00000563346 CEBPAP49715 358 aaPredicted RBP27.8■■■□□ 2.04
TSC2-219ENST00000563346 CCNB3Q8WWL7 1395 aa27.8■■■□□ 2.04
TSC2-219ENST00000563346 KIDINS220Q9ULH0 1771 aa27.79■■■□□ 2.04
TSC2-219ENST00000563346 SYCP2Q9BX26 1530 aa27.79■■■□□ 2.04
TSC2-219ENST00000563346 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
TSC2-219ENST00000563346 CEP162Q5TB80 1403 aa27.78■■■□□ 2.04
TSC2-219ENST00000563346 ESF1Q9H501 851 aaKnown RBP27.77■■■□□ 2.04
TSC2-219ENST00000563346 AGLP35573 1532 aa27.77■■■□□ 2.04
TSC2-219ENST00000563346 PREX1Q8TCU6 1659 aa27.75■■■□□ 2.03
TSC2-219ENST00000563346 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
TSC2-219ENST00000563346 SPAG9O60271 1321 aaKnown RBP27.74■■■□□ 2.03
TSC2-219ENST00000563346 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
TSC2-219ENST00000563346 CERKQ8TCT0 537 aa27.73■■■□□ 2.03
TSC2-219ENST00000563346 EHBP1L1Q8N3D4 1523 aa27.72■■■□□ 2.03
TSC2-219ENST00000563346 KIAA1107Q9UPP5 1409 aa27.71■■■□□ 2.03
TSC2-219ENST00000563346 C3P01024 1663 aa27.67■■■□□ 2.02
TSC2-219ENST00000563346 ATP7AQ04656 1500 aa27.67■■■□□ 2.02
TSC2-219ENST00000563346 UHRF1BP1Q6BDS2 1440 aa27.67■■■□□ 2.02
TSC2-219ENST00000563346 TIAM1Q13009 1591 aa27.65■■■□□ 2.02
TSC2-219ENST00000563346 CNTLNQ9NXG0 1405 aa27.63■■■□□ 2.01
TSC2-219ENST00000563346 INO80Q9ULG1 1556 aaPredicted RBP27.63■■■□□ 2.01
TSC2-219ENST00000563346 SUPT6HQ7KZ85 1726 aaKnown RBP27.63■■■□□ 2.01
TSC2-219ENST00000563346 SETD1BQ9UPS6 1966 aaKnown RBP27.62■■■□□ 2.01
TSC2-219ENST00000563346 ZNF644Q9H582 1327 aaPredicted RBP27.6■■■□□ 2.01
TSC2-219ENST00000563346 A2MP01023 1474 aa27.58■■■□□ 2.01
TSC2-219ENST00000563346 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
TSC2-219ENST00000563346 PLXNC1O60486 1568 aa27.55■■■□□ 2
TSC2-219ENST00000563346 MROH2AA6NES4 1674 aa27.54■■■□□ 2
TSC2-219ENST00000563346 DMRT2Q9Y5R5 561 aa27.54■■■□□ 2
TSC2-219ENST00000563346 ADGBQ8N7X0 1667 aa27.53■■■□□ 2
TSC2-219ENST00000563346 NCOA2Q15596 1464 aa27.53■■■□□ 2
TSC2-219ENST00000563346 MBD5Q9P267 1494 aa27.52■■■□□ 2
TSC2-219ENST00000563346 STRCQ7RTU9 1775 aa27.5■■□□□ 1.99
TSC2-219ENST00000563346 ZMYM3Q14202 1370 aa27.5■■□□□ 1.99
TSC2-219ENST00000563346 GGT6Q6P531 493 aa27.5■■□□□ 1.99
TSC2-219ENST00000563346 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
TSC2-219ENST00000563346 CLTCQ00610 1675 aaKnown RBP27.49■■□□□ 1.99
TSC2-219ENST00000563346 DISP3Q9P2K9 1392 aa27.49■■□□□ 1.99
TSC2-219ENST00000563346 RTEL1-TNFRSF6BF6WH68 1400 aa27.48■■□□□ 1.99
TSC2-219ENST00000563346 NPATQ14207 1427 aa27.47■■□□□ 1.99
TSC2-219ENST00000563346 CAMSAP2Q08AD1 1489 aa27.45■■□□□ 1.99
TSC2-219ENST00000563346 ILDR2Q71H61 639 aa27.45■■□□□ 1.98
TSC2-219ENST00000563346 CCDC141Q6ZP82 1450 aa27.44■■□□□ 1.98
TSC2-219ENST00000563346 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
TSC2-219ENST00000563346 PPP6R1Q9UPN7 881 aa27.42■■□□□ 1.98
TSC2-219ENST00000563346 LRRC9Q6ZRR7 1453 aa27.41■■□□□ 1.98
TSC2-219ENST00000563346 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
TSC2-219ENST00000563346 PTPRTO14522 1441 aa27.38■■□□□ 1.97
TSC2-219ENST00000563346 PTPRKQ15262 1439 aa27.35■■□□□ 1.97
TSC2-219ENST00000563346 NCOA1Q15788 1441 aa27.35■■□□□ 1.97
TSC2-219ENST00000563346 TSPY4P0CV99 314 aa27.35■■□□□ 1.97
TSC2-219ENST00000563346 TSPY10P0CW01 314 aa27.35■■□□□ 1.97
TSC2-219ENST00000563346 ARHGEF5Q12774 1597 aa27.35■■□□□ 1.97
TSC2-219ENST00000563346 CAMSAP1Q5T5Y3 1602 aa27.34■■□□□ 1.97
TSC2-219ENST00000563346 KIF3BO15066 747 aa27.34■■□□□ 1.97
TSC2-219ENST00000563346 MYO3AQ8NEV4 1616 aa27.34■■□□□ 1.97
TSC2-219ENST00000563346 MAP3K1Q13233 1512 aa27.33■■□□□ 1.97
TSC2-219ENST00000563346 KANK4Q5T7N3 995 aaPredicted RBP27.31■■□□□ 1.96
TSC2-219ENST00000563346 ZNF142P52746 1687 aaPredicted RBP27.3■■□□□ 1.96
TSC2-219ENST00000563346 CEP170BQ9Y4F5 1589 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms