RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 HECW1Q76N89 1606 aa15.06■□□□□ 0
CHRFAM7A-204ENST00000562729 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
CHRFAM7A-204ENST00000562729 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ -0
CHRFAM7A-204ENST00000562729 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
CHRFAM7A-204ENST00000562729 CDK13Q14004 1512 aaKnown RBP15.02■□□□□ -0
CHRFAM7A-204ENST00000562729 PHLDB1Q86UU1 1377 aa15□□□□□ -0.01
CHRFAM7A-204ENST00000562729 NEO1Q92859 1461 aa14.98□□□□□ -0.01
CHRFAM7A-204ENST00000562729 CLIP1P30622 1438 aa14.98□□□□□ -0.01
CHRFAM7A-204ENST00000562729 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
CHRFAM7A-204ENST00000562729 CFAP74Q9C0B2 1584 aa14.97□□□□□ -0.01
CHRFAM7A-204ENST00000562729 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
CHRFAM7A-204ENST00000562729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
CHRFAM7A-204ENST00000562729 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
CHRFAM7A-204ENST00000562729 FANCAO15360 1455 aa14.95□□□□□ -0.02
CHRFAM7A-204ENST00000562729 ADGRL1O94910 1474 aa14.95□□□□□ -0.02
CHRFAM7A-204ENST00000562729 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
CHRFAM7A-204ENST00000562729 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
CHRFAM7A-204ENST00000562729 KIF14Q15058 1648 aa14.94□□□□□ -0.02
CHRFAM7A-204ENST00000562729 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
CHRFAM7A-204ENST00000562729 CCDC18Q5T9S5 1454 aa14.93□□□□□ -0.02
CHRFAM7A-204ENST00000562729 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
CHRFAM7A-204ENST00000562729 AKNAQ7Z591 1439 aa14.92□□□□□ -0.02
CHRFAM7A-204ENST00000562729 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
CHRFAM7A-204ENST00000562729 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
CHRFAM7A-204ENST00000562729 DENND4BO75064 1496 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-204ENST00000562729 TROQ12816 1431 aaPredicted RBP14.9□□□□□ -0.02
CHRFAM7A-204ENST00000562729 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
CHRFAM7A-204ENST00000562729 LRRIQ1Q96JM4 1722 aa14.89□□□□□ -0.03
CHRFAM7A-204ENST00000562729 POLA2Q14181 598 aa14.89□□□□□ -0.03
CHRFAM7A-204ENST00000562729 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
CHRFAM7A-204ENST00000562729 PLCH2O75038 1416 aa14.88□□□□□ -0.03
CHRFAM7A-204ENST00000562729 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
CHRFAM7A-204ENST00000562729 ARHGAP5Q13017 1502 aa14.87□□□□□ -0.03
CHRFAM7A-204ENST00000562729 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
CHRFAM7A-204ENST00000562729 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
CHRFAM7A-204ENST00000562729 FRMPD1Q5SYB0 1578 aa14.84□□□□□ -0.03
CHRFAM7A-204ENST00000562729 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.03
CHRFAM7A-204ENST00000562729 RICTORQ6R327 1708 aa14.83□□□□□ -0.03
CHRFAM7A-204ENST00000562729 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
CHRFAM7A-204ENST00000562729 ARHGEF40Q8TER5 1519 aa14.8□□□□□ -0.04
CHRFAM7A-204ENST00000562729 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
CHRFAM7A-204ENST00000562729 MTUS2Q5JR59 1369 aa14.79□□□□□ -0.04
CHRFAM7A-204ENST00000562729 POGZQ7Z3K3 1410 aa14.79□□□□□ -0.04
CHRFAM7A-204ENST00000562729 ZNF777Q9ULD5 760 aaPredicted RBP14.78□□□□□ -0.04
CHRFAM7A-204ENST00000562729 PREX2Q70Z35 1606 aa14.77□□□□□ -0.04
CHRFAM7A-204ENST00000562729 ZMYM4Q5VZL5 1548 aa14.77□□□□□ -0.04
CHRFAM7A-204ENST00000562729 MAGI2Q86UL8 1455 aa14.77□□□□□ -0.04
CHRFAM7A-204ENST00000562729 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
CHRFAM7A-204ENST00000562729 CDC42BPBQ9Y5S2 1711 aa14.76□□□□□ -0.05
CHRFAM7A-204ENST00000562729 CCNB3Q8WWL7 1395 aa14.74□□□□□ -0.05
CHRFAM7A-204ENST00000562729 YEATS2Q9ULM3 1422 aa14.74□□□□□ -0.05
CHRFAM7A-204ENST00000562729 BCORL1Q5H9F3 1711 aa14.73□□□□□ -0.05
CHRFAM7A-204ENST00000562729 CDC42BPAQ5VT25 1732 aa14.73□□□□□ -0.05
CHRFAM7A-204ENST00000562729 MLECQ14165 292 aa14.73□□□□□ -0.05
CHRFAM7A-204ENST00000562729 AFAP1Q8N556 730 aa14.73□□□□□ -0.05
CHRFAM7A-204ENST00000562729 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
CHRFAM7A-204ENST00000562729 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
CHRFAM7A-204ENST00000562729 EHBP1L1Q8N3D4 1523 aa14.71□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ADAMTSL3P82987 1691 aa14.71□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ATP10AO60312 1499 aa14.7□□□□□ -0.06
CHRFAM7A-204ENST00000562729 HECW2Q9P2P5 1572 aa14.7□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ABCC1P33527 1531 aa14.7□□□□□ -0.06
CHRFAM7A-204ENST00000562729 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
CHRFAM7A-204ENST00000562729 C9orf84Q5VXU9 1444 aa14.69□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ITSN2Q9NZM3 1697 aa14.69□□□□□ -0.06
CHRFAM7A-204ENST00000562729 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
CHRFAM7A-204ENST00000562729 PTPRMP28827 1452 aa14.69□□□□□ -0.06
CHRFAM7A-204ENST00000562729 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
CHRFAM7A-204ENST00000562729 RIMS1Q86UR5 1692 aaKnown RBP14.68□□□□□ -0.06
CHRFAM7A-204ENST00000562729 KDM5CP41229 1560 aa14.67□□□□□ -0.06
CHRFAM7A-204ENST00000562729 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
CHRFAM7A-204ENST00000562729 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
CHRFAM7A-204ENST00000562729 FOXD4L1Q9NU39 408 aa14.66□□□□□ -0.06
CHRFAM7A-204ENST00000562729 SYCP2Q9BX26 1530 aa14.66□□□□□ -0.06
CHRFAM7A-204ENST00000562729 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
CHRFAM7A-204ENST00000562729 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
CHRFAM7A-204ENST00000562729 HNRNPMP52272 730 aaKnown RBP eCLIP14.65□□□□□ -0.06
CHRFAM7A-204ENST00000562729 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-204ENST00000562729 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-204ENST00000562729 FER1L4A9Z1Z3 1794 aa14.64□□□□□ -0.07
CHRFAM7A-204ENST00000562729 TIAM1Q13009 1591 aa14.64□□□□□ -0.07
CHRFAM7A-204ENST00000562729 SPAG9O60271 1321 aaKnown RBP14.64□□□□□ -0.07
CHRFAM7A-204ENST00000562729 MLH3Q9UHC1 1453 aa14.63□□□□□ -0.07
CHRFAM7A-204ENST00000562729 ARHGEF12Q9NZN5 1544 aa14.63□□□□□ -0.07
CHRFAM7A-204ENST00000562729 SIGLEC1Q9BZZ2 1709 aa14.62□□□□□ -0.07
CHRFAM7A-204ENST00000562729 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
CHRFAM7A-204ENST00000562729 ABCA6Q8N139 1617 aa14.62□□□□□ -0.07
CHRFAM7A-204ENST00000562729 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
CHRFAM7A-204ENST00000562729 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
CHRFAM7A-204ENST00000562729 KIDINS220Q9ULH0 1771 aa14.58□□□□□ -0.08
CHRFAM7A-204ENST00000562729 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
CHRFAM7A-204ENST00000562729 ATP7AQ04656 1500 aa14.57□□□□□ -0.08
CHRFAM7A-204ENST00000562729 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
CHRFAM7A-204ENST00000562729 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-204ENST00000562729 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
CHRFAM7A-204ENST00000562729 AGLP35573 1532 aa14.53□□□□□ -0.08
CHRFAM7A-204ENST00000562729 MAP3K1Q13233 1512 aa14.53□□□□□ -0.08
CHRFAM7A-204ENST00000562729 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
CHRFAM7A-204ENST00000562729 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms