RNA–Protein interactions for RNA: ENST00000562664.5

PPP4C-204, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-204ENST00000562664 YEATS2Q9ULM3 1422 aa39.1■■■■□ 3.85
PPP4C-204ENST00000562664 ILDR1Q86SU0 546 aaPredicted RBP39.08■■■■□ 3.85
PPP4C-204ENST00000562664 ATP1B4Q9UN42 357 aaPredicted RBP39.08■■■■□ 3.85
PPP4C-204ENST00000562664 TROQ12816 1431 aaPredicted RBP39.06■■■■□ 3.84
PPP4C-204ENST00000562664 SCAPERQ9BY12 1400 aa39.06■■■■□ 3.84
PPP4C-204ENST00000562664 PCF11O94913 1555 aaKnown RBP39.02■■■■□ 3.84
PPP4C-204ENST00000562664 CDK11AQ9UQ88 783 aaPredicted RBP39.01■■■■□ 3.84
PPP4C-204ENST00000562664 CLIP1P30622 1438 aa38.96■■■■□ 3.83
PPP4C-204ENST00000562664 FER1L4A9Z1Z3 1794 aa38.95■■■■□ 3.83
PPP4C-204ENST00000562664 CDC42BPBQ9Y5S2 1711 aa38.94■■■■□ 3.82
PPP4C-204ENST00000562664 LMTK3Q96Q04 1460 aa38.93■■■■□ 3.82
PPP4C-204ENST00000562664 EFCAB2Q5VUJ9 269 aa38.93■■■■□ 3.82
PPP4C-204ENST00000562664 ARHGAP5Q13017 1502 aa38.93■■■■□ 3.82
PPP4C-204ENST00000562664 CASKIN1Q8WXD9 1431 aa38.91■■■■□ 3.82
PPP4C-204ENST00000562664 KDM5CP41229 1560 aa38.91■■■■□ 3.82
PPP4C-204ENST00000562664 CCDC18Q5T9S5 1454 aa38.9■■■■□ 3.82
PPP4C-204ENST00000562664 PREX2Q70Z35 1606 aa38.89■■■■□ 3.82
PPP4C-204ENST00000562664 ZNF518AQ6AHZ1 1483 aa38.87■■■■□ 3.81
PPP4C-204ENST00000562664 ATP10AO60312 1499 aa38.86■■■■□ 3.81
PPP4C-204ENST00000562664 C9orf84Q5VXU9 1444 aa38.85■■■■□ 3.81
PPP4C-204ENST00000562664 ARHGEF12Q9NZN5 1544 aa38.82■■■■□ 3.8
PPP4C-204ENST00000562664 FYCO1Q9BQS8 1478 aa38.8■■■■□ 3.8
PPP4C-204ENST00000562664 CDC42BPAQ5VT25 1732 aa38.79■■■■□ 3.8
PPP4C-204ENST00000562664 ABCC1P33527 1531 aa38.77■■■■□ 3.8
PPP4C-204ENST00000562664 DIP2CQ9Y2E4 1556 aa38.77■■■■□ 3.8
PPP4C-204ENST00000562664 ITSN2Q9NZM3 1697 aa38.77■■■■□ 3.8
PPP4C-204ENST00000562664 MLECQ14165 292 aa38.73■■■■□ 3.79
PPP4C-204ENST00000562664 ABCA6Q8N139 1617 aa38.72■■■■□ 3.79
PPP4C-204ENST00000562664 REREQ9P2R6 1566 aa38.72■■■■□ 3.79
PPP4C-204ENST00000562664 AFAP1Q8N556 730 aa38.7■■■■□ 3.79
PPP4C-204ENST00000562664 MLH3Q9UHC1 1453 aa38.66■■■■□ 3.78
PPP4C-204ENST00000562664 PLPPR3Q6T4P5 718 aa38.65■■■■□ 3.78
PPP4C-204ENST00000562664 TRAPPC8Q9Y2L5 1435 aa38.63■■■■□ 3.77
PPP4C-204ENST00000562664 PREX1Q8TCU6 1659 aa38.62■■■■□ 3.77
PPP4C-204ENST00000562664 KIDINS220Q9ULH0 1771 aa38.6■■■■□ 3.77
PPP4C-204ENST00000562664 HSPA2P54652 639 aa38.57■■■■□ 3.76
PPP4C-204ENST00000562664 SAMD9LQ8IVG5 1584 aa38.57■■■■□ 3.76
PPP4C-204ENST00000562664 AGLP35573 1532 aa38.54■■■■□ 3.76
PPP4C-204ENST00000562664 MYT1LQ9UL68 1186 aa38.51■■■■□ 3.76
PPP4C-204ENST00000562664 GPATCH8Q9UKJ3 1502 aaKnown RBP38.5■■■■□ 3.75
PPP4C-204ENST00000562664 FBXO41Q8TF61 875 aa38.49■■■■□ 3.75
PPP4C-204ENST00000562664 SYCP2Q9BX26 1530 aa38.48■■■■□ 3.75
PPP4C-204ENST00000562664 C3P01024 1663 aa38.47■■■■□ 3.75
PPP4C-204ENST00000562664 CEBPAP49715 358 aaPredicted RBP38.43■■■■□ 3.74
PPP4C-204ENST00000562664 SETD1BQ9UPS6 1966 aaKnown RBP38.42■■■■□ 3.74
PPP4C-204ENST00000562664 INO80Q9ULG1 1556 aaPredicted RBP38.36■■■■□ 3.73
PPP4C-204ENST00000562664 STRCQ7RTU9 1775 aa38.35■■■■□ 3.73
PPP4C-204ENST00000562664 ZNF777Q9ULD5 760 aaPredicted RBP38.34■■■■□ 3.73
PPP4C-204ENST00000562664 PLEKHH2Q8IVE3 1493 aa38.33■■■■□ 3.73
PPP4C-204ENST00000562664 ATP7AQ04656 1500 aa38.33■■■■□ 3.73
PPP4C-204ENST00000562664 TIAM1Q13009 1591 aa38.32■■■■□ 3.73
PPP4C-204ENST00000562664 UHRF1BP1Q6BDS2 1440 aa38.32■■■■□ 3.73
PPP4C-204ENST00000562664 KIAA1107Q9UPP5 1409 aa38.32■■■■□ 3.73
PPP4C-204ENST00000562664 MTUS2Q5JR59 1369 aa38.31■■■■□ 3.72
PPP4C-204ENST00000562664 EHBP1L1Q8N3D4 1523 aa38.31■■■■□ 3.72
PPP4C-204ENST00000562664 SUPT6HQ7KZ85 1726 aaKnown RBP38.3■■■■□ 3.72
PPP4C-204ENST00000562664 CCNB3Q8WWL7 1395 aa38.3■■■■□ 3.72
PPP4C-204ENST00000562664 MROH2AA6NES4 1674 aa38.3■■■■□ 3.72
PPP4C-204ENST00000562664 PLXNC1O60486 1568 aa38.28■■■■□ 3.72
PPP4C-204ENST00000562664 HNRNPMP52272 730 aaKnown RBP eCLIP38.26■■■■□ 3.72
PPP4C-204ENST00000562664 CEP162Q5TB80 1403 aa38.26■■■■□ 3.72
PPP4C-204ENST00000562664 SPAG9O60271 1321 aaKnown RBP38.25■■■■□ 3.71
PPP4C-204ENST00000562664 CNTLNQ9NXG0 1405 aa38.25■■■■□ 3.71
PPP4C-204ENST00000562664 CFDP1Q9UEE9 299 aaPredicted RBP38.25■■■■□ 3.71
PPP4C-204ENST00000562664 ESF1Q9H501 851 aaKnown RBP38.19■■■■□ 3.7
PPP4C-204ENST00000562664 ADGBQ8N7X0 1667 aa38.18■■■■□ 3.7
PPP4C-204ENST00000562664 A2MP01023 1474 aa38.15■■■■□ 3.7
PPP4C-204ENST00000562664 CLTCQ00610 1675 aaKnown RBP38.15■■■■□ 3.7
PPP4C-204ENST00000562664 MBD5Q9P267 1494 aa38.12■■■■□ 3.69
PPP4C-204ENST00000562664 CERKQ8TCT0 537 aa38.1■■■■□ 3.69
PPP4C-204ENST00000562664 NPATQ14207 1427 aa38.09■■■■□ 3.69
PPP4C-204ENST00000562664 ZNF644Q9H582 1327 aaPredicted RBP38.08■■■■□ 3.69
PPP4C-204ENST00000562664 DMRT2Q9Y5R5 561 aa38.04■■■■□ 3.68
PPP4C-204ENST00000562664 ZMYM3Q14202 1370 aa38.04■■■■□ 3.68
PPP4C-204ENST00000562664 PTPRTO14522 1441 aa38.02■■■■□ 3.68
PPP4C-204ENST00000562664 NCOA2Q15596 1464 aa38.02■■■■□ 3.68
PPP4C-204ENST00000562664 ZNF142P52746 1687 aaPredicted RBP38.01■■■■□ 3.68
PPP4C-204ENST00000562664 MYO3AQ8NEV4 1616 aa38.01■■■■□ 3.67
PPP4C-204ENST00000562664 NCOA1Q15788 1441 aa38■■■■□ 3.67
PPP4C-204ENST00000562664 RTEL1-TNFRSF6BF6WH68 1400 aa37.99■■■■□ 3.67
PPP4C-204ENST00000562664 CAMSAP2Q08AD1 1489 aa37.97■■■■□ 3.67
PPP4C-204ENST00000562664 CAMSAP1Q5T5Y3 1602 aa37.95■■■■□ 3.67
PPP4C-204ENST00000562664 CCDC141Q6ZP82 1450 aa37.94■■■■□ 3.66
PPP4C-204ENST00000562664 PTPRKQ15262 1439 aa37.92■■■■□ 3.66
PPP4C-204ENST00000562664 VPS8Q8N3P4 1428 aa37.89■■■■□ 3.66
PPP4C-204ENST00000562664 GGT6Q6P531 493 aa37.89■■■■□ 3.66
PPP4C-204ENST00000562664 CEP170BQ9Y4F5 1589 aaPredicted RBP37.89■■■■□ 3.66
PPP4C-204ENST00000562664 ARHGEF5Q12774 1597 aa37.87■■■■□ 3.65
PPP4C-204ENST00000562664 LTBP4Q8N2S1 1624 aa37.87■■■■□ 3.65
PPP4C-204ENST00000562664 DHX29Q7Z478 1369 aaKnown RBP37.86■■■■□ 3.65
PPP4C-204ENST00000562664 PPP6R1Q9UPN7 881 aa37.84■■■■□ 3.65
PPP4C-204ENST00000562664 LRRC9Q6ZRR7 1453 aa37.83■■■■□ 3.65
PPP4C-204ENST00000562664 PLA2R1Q13018 1463 aa37.79■■■■□ 3.64
PPP4C-204ENST00000562664 FAM135AQ9P2D6 1515 aa37.79■■■■□ 3.64
PPP4C-204ENST00000562664 KDM5DQ9BY66 1539 aa37.76■■■■□ 3.63
PPP4C-204ENST00000562664 LOC105371045A0A1W2PR82 267 aa37.75■■■■□ 3.63
PPP4C-204ENST00000562664 RSPH4AQ5TD94 716 aa37.75■■■■□ 3.63
PPP4C-204ENST00000562664 MAP3K1Q13233 1512 aa37.74■■■■□ 3.63
PPP4C-204ENST00000562664 TCOF1Q13428 1488 aaKnown RBP37.74■■■■□ 3.63
PPP4C-204ENST00000562664 IQSEC2Q5JU85 1478 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms