RNA–Protein interactions for RNA: ENST00000562571.1

LRRC9-204, Transcript of leucine rich repeat containing 9, humanhuman

TSL 3

Gene LRRC9, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-204ENST00000562571 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
LRRC9-204ENST00000562571 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
LRRC9-204ENST00000562571 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
LRRC9-204ENST00000562571 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
LRRC9-204ENST00000562571 POTEB3A0JP26 581 aa13□□□□□ -0.33
LRRC9-204ENST00000562571 POTEBQ6S5H4 581 aa13□□□□□ -0.33
LRRC9-204ENST00000562571 KIF3CO14782 793 aa12.99□□□□□ -0.33
LRRC9-204ENST00000562571 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
LRRC9-204ENST00000562571 ERBB3P21860 1342 aa12.96□□□□□ -0.33
LRRC9-204ENST00000562571 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
LRRC9-204ENST00000562571 C2orf72A6NCS6 295 aa12.94□□□□□ -0.34
LRRC9-204ENST00000562571 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
LRRC9-204ENST00000562571 SPNS2Q8IVW8 549 aa12.94□□□□□ -0.34
LRRC9-204ENST00000562571 PPP1R37O75864 691 aa12.93□□□□□ -0.34
LRRC9-204ENST00000562571 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
LRRC9-204ENST00000562571 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
LRRC9-204ENST00000562571 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
LRRC9-204ENST00000562571 RYDENQ9NUL5 291 aaKnown RBP12.89□□□□□ -0.35
LRRC9-204ENST00000562571 SLC34A2O95436 690 aa12.88□□□□□ -0.35
LRRC9-204ENST00000562571 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
LRRC9-204ENST00000562571 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
LRRC9-204ENST00000562571 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
LRRC9-204ENST00000562571 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
LRRC9-204ENST00000562571 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
LRRC9-204ENST00000562571 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
LRRC9-204ENST00000562571 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
LRRC9-204ENST00000562571 FOXK1P85037 733 aa12.78□□□□□ -0.36
LRRC9-204ENST00000562571 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRRC9-204ENST00000562571 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
LRRC9-204ENST00000562571 NUDT7P0C024 238 aa12.74□□□□□ -0.37
LRRC9-204ENST00000562571 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
LRRC9-204ENST00000562571 PLPP6Q8IY26 295 aa12.71□□□□□ -0.37
LRRC9-204ENST00000562571 DSG2Q14126 1118 aa12.68□□□□□ -0.38
LRRC9-204ENST00000562571 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
LRRC9-204ENST00000562571 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
LRRC9-204ENST00000562571 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
LRRC9-204ENST00000562571 PBX2P40425 430 aa12.66□□□□□ -0.38
LRRC9-204ENST00000562571 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
LRRC9-204ENST00000562571 TBC1D12O60347 775 aa12.65□□□□□ -0.38
LRRC9-204ENST00000562571 PTGER2P43116 358 aa12.65□□□□□ -0.38
LRRC9-204ENST00000562571 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
LRRC9-204ENST00000562571 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
LRRC9-204ENST00000562571 PDE4AP27815 886 aa12.61□□□□□ -0.39
LRRC9-204ENST00000562571 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
LRRC9-204ENST00000562571 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
LRRC9-204ENST00000562571 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
LRRC9-204ENST00000562571 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
LRRC9-204ENST00000562571 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
LRRC9-204ENST00000562571 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
LRRC9-204ENST00000562571 NCKAP5LQ9HCH0 1330 aa12.56□□□□□ -0.4
LRRC9-204ENST00000562571 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
LRRC9-204ENST00000562571 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
LRRC9-204ENST00000562571 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
LRRC9-204ENST00000562571 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
LRRC9-204ENST00000562571 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
LRRC9-204ENST00000562571 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
LRRC9-204ENST00000562571 MFSD10Q14728 455 aa12.48□□□□□ -0.41
LRRC9-204ENST00000562571 UPF1Q92900 1129 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRRC9-204ENST00000562571 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
LRRC9-204ENST00000562571 TK2O00142 265 aa12.44□□□□□ -0.42
LRRC9-204ENST00000562571 BBXQ8WY36 941 aaPredicted RBP12.44□□□□□ -0.42
LRRC9-204ENST00000562571 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
LRRC9-204ENST00000562571 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
LRRC9-204ENST00000562571 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
LRRC9-204ENST00000562571 PSEN2P49810 448 aa12.39□□□□□ -0.43
LRRC9-204ENST00000562571 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
LRRC9-204ENST00000562571 EVI5O60447 810 aa12.37□□□□□ -0.43
LRRC9-204ENST00000562571 FOSBP53539 338 aa12.37□□□□□ -0.43
LRRC9-204ENST00000562571 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
LRRC9-204ENST00000562571 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
LRRC9-204ENST00000562571 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
LRRC9-204ENST00000562571 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
LRRC9-204ENST00000562571 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
LRRC9-204ENST00000562571 HRO43593 1189 aa12.35□□□□□ -0.43
LRRC9-204ENST00000562571 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
LRRC9-204ENST00000562571 EMILIN3Q9NT22 766 aa12.33□□□□□ -0.44
LRRC9-204ENST00000562571 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
LRRC9-204ENST00000562571 PTPREP23469 700 aa12.3□□□□□ -0.44
LRRC9-204ENST00000562571 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
LRRC9-204ENST00000562571 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.3□□□□□ -0.44
LRRC9-204ENST00000562571 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
LRRC9-204ENST00000562571 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
LRRC9-204ENST00000562571 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
LRRC9-204ENST00000562571 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
LRRC9-204ENST00000562571 HCSTQ9UBK5 93 aa12.28□□□□□ -0.44
LRRC9-204ENST00000562571 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
LRRC9-204ENST00000562571 ADAM33Q9BZ11 813 aa12.23□□□□□ -0.45
LRRC9-204ENST00000562571 PHF14O94880 888 aa12.22□□□□□ -0.45
LRRC9-204ENST00000562571 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
LRRC9-204ENST00000562571 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
LRRC9-204ENST00000562571 PCDHGA10Q9Y5H3 936 aa12.21□□□□□ -0.45
LRRC9-204ENST00000562571 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
LRRC9-204ENST00000562571 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
LRRC9-204ENST00000562571 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
LRRC9-204ENST00000562571 DPYSL4O14531 572 aa12.17□□□□□ -0.46
LRRC9-204ENST00000562571 KCTD12Q96CX2 325 aaKnown RBP12.16□□□□□ -0.46
LRRC9-204ENST00000562571 EPAS1Q99814 870 aa12.16□□□□□ -0.46
LRRC9-204ENST00000562571 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
LRRC9-204ENST00000562571 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
LRRC9-204ENST00000562571 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms