RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
TSC2-218ENST00000562474 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
TSC2-218ENST00000562474 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
TSC2-218ENST00000562474 ARAP3Q8WWN8 1544 aa17.68■□□□□ 0.42
TSC2-218ENST00000562474 SAMD9LQ8IVG5 1584 aa17.68■□□□□ 0.42
TSC2-218ENST00000562474 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
TSC2-218ENST00000562474 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
TSC2-218ENST00000562474 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
TSC2-218ENST00000562474 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
TSC2-218ENST00000562474 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
TSC2-218ENST00000562474 MAP3K1Q13233 1512 aa17.65■□□□□ 0.42
TSC2-218ENST00000562474 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.42
TSC2-218ENST00000562474 ABCC1P33527 1531 aa17.64■□□□□ 0.41
TSC2-218ENST00000562474 APLP2Q06481 763 aa17.64■□□□□ 0.41
TSC2-218ENST00000562474 DENND4BO75064 1496 aaPredicted RBP17.63■□□□□ 0.41
TSC2-218ENST00000562474 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
TSC2-218ENST00000562474 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
TSC2-218ENST00000562474 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
TSC2-218ENST00000562474 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
TSC2-218ENST00000562474 POGZQ7Z3K3 1410 aa17.59■□□□□ 0.41
TSC2-218ENST00000562474 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
TSC2-218ENST00000562474 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
TSC2-218ENST00000562474 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
TSC2-218ENST00000562474 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
TSC2-218ENST00000562474 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
TSC2-218ENST00000562474 ZMYM4Q5VZL5 1548 aa17.56■□□□□ 0.4
TSC2-218ENST00000562474 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
TSC2-218ENST00000562474 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
TSC2-218ENST00000562474 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
TSC2-218ENST00000562474 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
TSC2-218ENST00000562474 HECW2Q9P2P5 1572 aa17.54■□□□□ 0.4
TSC2-218ENST00000562474 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
TSC2-218ENST00000562474 HNRNPMP52272 730 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSC2-218ENST00000562474 KDM5CP41229 1560 aa17.53■□□□□ 0.4
TSC2-218ENST00000562474 ABCA6Q8N139 1617 aa17.53■□□□□ 0.4
TSC2-218ENST00000562474 KIDINS220Q9ULH0 1771 aa17.53■□□□□ 0.4
TSC2-218ENST00000562474 ZNF518AQ6AHZ1 1483 aa17.51■□□□□ 0.39
TSC2-218ENST00000562474 MYOM3Q5VTT5 1437 aa17.51■□□□□ 0.39
TSC2-218ENST00000562474 MYT1LQ9UL68 1186 aa17.51■□□□□ 0.39
TSC2-218ENST00000562474 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
TSC2-218ENST00000562474 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
TSC2-218ENST00000562474 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
TSC2-218ENST00000562474 PLEKHH2Q8IVE3 1493 aa17.46■□□□□ 0.39
TSC2-218ENST00000562474 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
TSC2-218ENST00000562474 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
TSC2-218ENST00000562474 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
TSC2-218ENST00000562474 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
TSC2-218ENST00000562474 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
TSC2-218ENST00000562474 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
TSC2-218ENST00000562474 BCORL1Q5H9F3 1711 aa17.43■□□□□ 0.38
TSC2-218ENST00000562474 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
TSC2-218ENST00000562474 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
TSC2-218ENST00000562474 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
TSC2-218ENST00000562474 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
TSC2-218ENST00000562474 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
TSC2-218ENST00000562474 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
TSC2-218ENST00000562474 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
TSC2-218ENST00000562474 MADDQ8WXG6 1647 aa17.39■□□□□ 0.38
TSC2-218ENST00000562474 MIA2Q96PC5 1412 aa17.39■□□□□ 0.38
TSC2-218ENST00000562474 ATP10AO60312 1499 aa17.39■□□□□ 0.37
TSC2-218ENST00000562474 MLECQ14165 292 aa17.39■□□□□ 0.37
TSC2-218ENST00000562474 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
TSC2-218ENST00000562474 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
TSC2-218ENST00000562474 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
TSC2-218ENST00000562474 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
TSC2-218ENST00000562474 ADAMTSL3P82987 1691 aa17.38■□□□□ 0.37
TSC2-218ENST00000562474 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
TSC2-218ENST00000562474 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
TSC2-218ENST00000562474 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
TSC2-218ENST00000562474 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
TSC2-218ENST00000562474 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
TSC2-218ENST00000562474 ABCC5O15440 1437 aa17.31■□□□□ 0.36
TSC2-218ENST00000562474 DAPK1P53355 1430 aa17.31■□□□□ 0.36
TSC2-218ENST00000562474 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
TSC2-218ENST00000562474 A2MP01023 1474 aa17.31■□□□□ 0.36
TSC2-218ENST00000562474 CHIC2Q9UKJ5 165 aa17.3■□□□□ 0.36
TSC2-218ENST00000562474 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
TSC2-218ENST00000562474 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
TSC2-218ENST00000562474 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
TSC2-218ENST00000562474 ITGAEP38570 1179 aa17.27■□□□□ 0.36
TSC2-218ENST00000562474 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
TSC2-218ENST00000562474 AGLP35573 1532 aa17.26■□□□□ 0.35
TSC2-218ENST00000562474 CLTCQ00610 1675 aaKnown RBP17.26■□□□□ 0.35
TSC2-218ENST00000562474 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
TSC2-218ENST00000562474 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
TSC2-218ENST00000562474 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
TSC2-218ENST00000562474 CFAP65Q6ZU64 1925 aaKnown RBP17.23■□□□□ 0.35
TSC2-218ENST00000562474 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
TSC2-218ENST00000562474 PTPRMP28827 1452 aa17.22■□□□□ 0.35
TSC2-218ENST00000562474 C3P01024 1663 aa17.21■□□□□ 0.35
TSC2-218ENST00000562474 CEP152O94986 1710 aa17.21■□□□□ 0.35
TSC2-218ENST00000562474 KIF15Q9NS87 1388 aa17.2■□□□□ 0.34
TSC2-218ENST00000562474 GGT6Q6P531 493 aa17.2■□□□□ 0.34
TSC2-218ENST00000562474 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
TSC2-218ENST00000562474 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
TSC2-218ENST00000562474 KIF3BO15066 747 aa17.18■□□□□ 0.34
TSC2-218ENST00000562474 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
TSC2-218ENST00000562474 CEBPAP49715 358 aaPredicted RBP17.17■□□□□ 0.34
TSC2-218ENST00000562474 EIF2AK4Q9P2K8 1649 aaKnown RBP17.17■□□□□ 0.34
TSC2-218ENST00000562474 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms