RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 CDC42BPBQ9Y5S2 1711 aa21.39■■□□□ 1.01
CNN2-204ENST00000562075 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
CNN2-204ENST00000562075 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
CNN2-204ENST00000562075 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
CNN2-204ENST00000562075 DAPK1P53355 1430 aa21.36■■□□□ 1.01
CNN2-204ENST00000562075 ABCA9Q8IUA7 1624 aa21.34■■□□□ 1.01
CNN2-204ENST00000562075 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
CNN2-204ENST00000562075 PLCH2O75038 1416 aa21.33■■□□□ 1.01
CNN2-204ENST00000562075 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1.01
CNN2-204ENST00000562075 SAMD9LQ8IVG5 1584 aa21.32■■□□□ 1
CNN2-204ENST00000562075 ABCC5O15440 1437 aa21.32■■□□□ 1
CNN2-204ENST00000562075 HRCP23327 699 aa21.32■■□□□ 1
CNN2-204ENST00000562075 MAPKBP1O60336 1514 aa21.32■■□□□ 1
CNN2-204ENST00000562075 CROCC2H7BZ55 1655 aa21.3■■□□□ 1
CNN2-204ENST00000562075 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
CNN2-204ENST00000562075 RAB3GAP2Q9H2M9 1393 aa21.29■■□□□ 1
CNN2-204ENST00000562075 HFM1A2PYH4 1435 aa21.29■■□□□ 1
CNN2-204ENST00000562075 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
CNN2-204ENST00000562075 CHIC2Q9UKJ5 165 aa21.28■■□□□ 1
CNN2-204ENST00000562075 AKNAQ7Z591 1439 aa21.28■■□□□ 1
CNN2-204ENST00000562075 ARHGEF5Q12774 1597 aa21.27■■□□□ 1
CNN2-204ENST00000562075 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
CNN2-204ENST00000562075 EFCAB2Q5VUJ9 269 aa21.26■□□□□ 0.99
CNN2-204ENST00000562075 GCC2Q8IWJ2 1684 aa21.25■□□□□ 0.99
CNN2-204ENST00000562075 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
CNN2-204ENST00000562075 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
CNN2-204ENST00000562075 ROCK1Q13464 1354 aa21.24■□□□□ 0.99
CNN2-204ENST00000562075 NAIPQ13075 1403 aa21.24■□□□□ 0.99
CNN2-204ENST00000562075 HNRNPMP52272 730 aaKnown RBP eCLIP21.23■□□□□ 0.99
CNN2-204ENST00000562075 SHANK2Q9UPX8 1470 aa21.23■□□□□ 0.99
CNN2-204ENST00000562075 KIAA1107Q9UPP5 1409 aa21.22■□□□□ 0.99
CNN2-204ENST00000562075 CCDC141Q6ZP82 1450 aa21.22■□□□□ 0.99
CNN2-204ENST00000562075 MBD5Q9P267 1494 aa21.22■□□□□ 0.99
CNN2-204ENST00000562075 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
CNN2-204ENST00000562075 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
CNN2-204ENST00000562075 ABCC1P33527 1531 aa21.2■□□□□ 0.98
CNN2-204ENST00000562075 FANCAO15360 1455 aa21.2■□□□□ 0.98
CNN2-204ENST00000562075 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
CNN2-204ENST00000562075 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
CNN2-204ENST00000562075 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
CNN2-204ENST00000562075 CD109Q6YHK3 1445 aa21.19■□□□□ 0.98
CNN2-204ENST00000562075 TSPY4P0CV99 314 aa21.18■□□□□ 0.98
CNN2-204ENST00000562075 TSPY10P0CW01 314 aa21.18■□□□□ 0.98
CNN2-204ENST00000562075 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
CNN2-204ENST00000562075 ANKRD30AQ9BXX3 1397 aa21.17■□□□□ 0.98
CNN2-204ENST00000562075 CFAP74Q9C0B2 1584 aa21.16■□□□□ 0.98
CNN2-204ENST00000562075 GLI2P10070 1586 aa21.15■□□□□ 0.98
CNN2-204ENST00000562075 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
CNN2-204ENST00000562075 NCOA1Q15788 1441 aa21.14■□□□□ 0.98
CNN2-204ENST00000562075 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
CNN2-204ENST00000562075 MAP3K4Q9Y6R4 1608 aa21.12■□□□□ 0.97
CNN2-204ENST00000562075 DIP2BQ9P265 1576 aa21.12■□□□□ 0.97
CNN2-204ENST00000562075 ADGRL1O94910 1474 aa21.11■□□□□ 0.97
CNN2-204ENST00000562075 KDM6BO15054 1643 aa21.11■□□□□ 0.97
CNN2-204ENST00000562075 TRAPPC8Q9Y2L5 1435 aa21.09■□□□□ 0.97
CNN2-204ENST00000562075 SCAPERQ9BY12 1400 aa21.07■□□□□ 0.96
CNN2-204ENST00000562075 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
CNN2-204ENST00000562075 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
CNN2-204ENST00000562075 FAM69CQ0P6D2 419 aa21.06■□□□□ 0.96
CNN2-204ENST00000562075 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
CNN2-204ENST00000562075 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
CNN2-204ENST00000562075 NEO1Q92859 1461 aa21.05■□□□□ 0.96
CNN2-204ENST00000562075 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
CNN2-204ENST00000562075 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
CNN2-204ENST00000562075 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
CNN2-204ENST00000562075 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
CNN2-204ENST00000562075 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
CNN2-204ENST00000562075 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
CNN2-204ENST00000562075 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
CNN2-204ENST00000562075 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
CNN2-204ENST00000562075 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
CNN2-204ENST00000562075 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
CNN2-204ENST00000562075 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
CNN2-204ENST00000562075 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
CNN2-204ENST00000562075 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
CNN2-204ENST00000562075 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
CNN2-204ENST00000562075 PPRC1Q5VV67 1664 aaKnown RBP20.95■□□□□ 0.94
CNN2-204ENST00000562075 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
CNN2-204ENST00000562075 KDM5CP41229 1560 aa20.93■□□□□ 0.94
CNN2-204ENST00000562075 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
CNN2-204ENST00000562075 ERBINQ96RT1 1412 aa20.92■□□□□ 0.94
CNN2-204ENST00000562075 MPHOSPH9Q99550 1183 aa20.9■□□□□ 0.94
CNN2-204ENST00000562075 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.94
CNN2-204ENST00000562075 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
CNN2-204ENST00000562075 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
CNN2-204ENST00000562075 PZPP20742 1482 aa20.88■□□□□ 0.93
CNN2-204ENST00000562075 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
CNN2-204ENST00000562075 UNC13BO14795 1591 aa20.87■□□□□ 0.93
CNN2-204ENST00000562075 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
CNN2-204ENST00000562075 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
CNN2-204ENST00000562075 NUP155O75694 1391 aa20.85■□□□□ 0.93
CNN2-204ENST00000562075 RAPGEF3O95398 923 aa20.85■□□□□ 0.93
CNN2-204ENST00000562075 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.92
CNN2-204ENST00000562075 DHX29Q7Z478 1369 aaKnown RBP20.81■□□□□ 0.92
CNN2-204ENST00000562075 EIF2AK4Q9P2K8 1649 aaKnown RBP20.81■□□□□ 0.92
CNN2-204ENST00000562075 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
CNN2-204ENST00000562075 SIN3AQ96ST3 1273 aa20.8■□□□□ 0.92
CNN2-204ENST00000562075 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
CNN2-204ENST00000562075 A2MP01023 1474 aa20.79■□□□□ 0.92
CNN2-204ENST00000562075 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms