RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
SPG7-205ENST00000561945 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
SPG7-205ENST00000561945 CDK11AQ9UQ88 783 aaPredicted RBP24.05■■□□□ 1.44
SPG7-205ENST00000561945 ARID4BQ4LE39 1312 aaPredicted RBP24.04■■□□□ 1.44
SPG7-205ENST00000561945 PCF11O94913 1555 aaKnown RBP24.03■■□□□ 1.44
SPG7-205ENST00000561945 LMTK3Q96Q04 1460 aa24.02■■□□□ 1.44
SPG7-205ENST00000561945 EFCAB2Q5VUJ9 269 aa24■■□□□ 1.43
SPG7-205ENST00000561945 KDM5CP41229 1560 aa23.99■■□□□ 1.43
SPG7-205ENST00000561945 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
SPG7-205ENST00000561945 CLIP1P30622 1438 aa23.98■■□□□ 1.43
SPG7-205ENST00000561945 ATP10AO60312 1499 aa23.97■■□□□ 1.43
SPG7-205ENST00000561945 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
SPG7-205ENST00000561945 CDC42BPBQ9Y5S2 1711 aa23.96■■□□□ 1.43
SPG7-205ENST00000561945 CCDC18Q5T9S5 1454 aa23.96■■□□□ 1.43
SPG7-205ENST00000561945 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
SPG7-205ENST00000561945 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
SPG7-205ENST00000561945 ATP1B4Q9UN42 357 aaPredicted RBP23.95■■□□□ 1.42
SPG7-205ENST00000561945 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
SPG7-205ENST00000561945 C9orf84Q5VXU9 1444 aa23.94■■□□□ 1.42
SPG7-205ENST00000561945 PREX2Q70Z35 1606 aa23.94■■□□□ 1.42
SPG7-205ENST00000561945 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
SPG7-205ENST00000561945 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
SPG7-205ENST00000561945 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
SPG7-205ENST00000561945 ABCC1P33527 1531 aa23.87■■□□□ 1.41
SPG7-205ENST00000561945 MLH3Q9UHC1 1453 aa23.87■■□□□ 1.41
SPG7-205ENST00000561945 DIP2CQ9Y2E4 1556 aa23.86■■□□□ 1.41
SPG7-205ENST00000561945 CDC42BPAQ5VT25 1732 aa23.85■■□□□ 1.41
SPG7-205ENST00000561945 ITSN2Q9NZM3 1697 aa23.85■■□□□ 1.41
SPG7-205ENST00000561945 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
SPG7-205ENST00000561945 ABCA6Q8N139 1617 aa23.83■■□□□ 1.41
SPG7-205ENST00000561945 PREX1Q8TCU6 1659 aa23.79■■□□□ 1.4
SPG7-205ENST00000561945 AGLP35573 1532 aa23.79■■□□□ 1.4
SPG7-205ENST00000561945 TRAPPC8Q9Y2L5 1435 aa23.78■■□□□ 1.4
SPG7-205ENST00000561945 MLECQ14165 292 aa23.78■■□□□ 1.4
SPG7-205ENST00000561945 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
SPG7-205ENST00000561945 KIDINS220Q9ULH0 1771 aa23.77■■□□□ 1.4
SPG7-205ENST00000561945 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
SPG7-205ENST00000561945 HSPA2P54652 639 aa23.75■■□□□ 1.39
SPG7-205ENST00000561945 SAMD9LQ8IVG5 1584 aa23.74■■□□□ 1.39
SPG7-205ENST00000561945 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
SPG7-205ENST00000561945 SETD1BQ9UPS6 1966 aaKnown RBP23.69■■□□□ 1.38
SPG7-205ENST00000561945 C3P01024 1663 aa23.69■■□□□ 1.38
SPG7-205ENST00000561945 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
SPG7-205ENST00000561945 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
SPG7-205ENST00000561945 CEBPAP49715 358 aaPredicted RBP23.64■■□□□ 1.37
SPG7-205ENST00000561945 STRCQ7RTU9 1775 aa23.64■■□□□ 1.37
SPG7-205ENST00000561945 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
SPG7-205ENST00000561945 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
SPG7-205ENST00000561945 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
SPG7-205ENST00000561945 MROH2AA6NES4 1674 aa23.62■■□□□ 1.37
SPG7-205ENST00000561945 UHRF1BP1Q6BDS2 1440 aa23.61■■□□□ 1.37
SPG7-205ENST00000561945 CNTLNQ9NXG0 1405 aa23.61■■□□□ 1.37
SPG7-205ENST00000561945 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
SPG7-205ENST00000561945 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
SPG7-205ENST00000561945 EHBP1L1Q8N3D4 1523 aa23.57■■□□□ 1.36
SPG7-205ENST00000561945 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
SPG7-205ENST00000561945 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
SPG7-205ENST00000561945 SPAG9O60271 1321 aaKnown RBP23.55■■□□□ 1.36
SPG7-205ENST00000561945 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
SPG7-205ENST00000561945 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.365e-11■■■■■ 37.4
SPG7-205ENST00000561945 CFDP1Q9UEE9 299 aaPredicted RBP23.54■■□□□ 1.36
SPG7-205ENST00000561945 ZNF777Q9ULD5 760 aaPredicted RBP23.54■■□□□ 1.36
SPG7-205ENST00000561945 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
SPG7-205ENST00000561945 NPATQ14207 1427 aa23.52■■□□□ 1.36
SPG7-205ENST00000561945 CERKQ8TCT0 537 aa23.52■■□□□ 1.36
SPG7-205ENST00000561945 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
SPG7-205ENST00000561945 ADGBQ8N7X0 1667 aa23.51■■□□□ 1.35
SPG7-205ENST00000561945 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
SPG7-205ENST00000561945 DMRT2Q9Y5R5 561 aa23.51■■□□□ 1.35
SPG7-205ENST00000561945 A2MP01023 1474 aa23.5■■□□□ 1.35
SPG7-205ENST00000561945 PTPRTO14522 1441 aa23.5■■□□□ 1.35
SPG7-205ENST00000561945 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
SPG7-205ENST00000561945 RTEL1-TNFRSF6BF6WH68 1400 aa23.46■■□□□ 1.35
SPG7-205ENST00000561945 CLTCQ00610 1675 aaKnown RBP23.46■■□□□ 1.35
SPG7-205ENST00000561945 ZMYM3Q14202 1370 aa23.45■■□□□ 1.34
SPG7-205ENST00000561945 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
SPG7-205ENST00000561945 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
SPG7-205ENST00000561945 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
SPG7-205ENST00000561945 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
SPG7-205ENST00000561945 NCOA2Q15596 1464 aa23.39■■□□□ 1.34
SPG7-205ENST00000561945 MYO3AQ8NEV4 1616 aa23.39■■□□□ 1.33
SPG7-205ENST00000561945 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
SPG7-205ENST00000561945 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
SPG7-205ENST00000561945 LTBP4Q8N2S1 1624 aa23.37■■□□□ 1.33
SPG7-205ENST00000561945 FAM135AQ9P2D6 1515 aa23.35■■□□□ 1.33
SPG7-205ENST00000561945 DHX29Q7Z478 1369 aaKnown RBP23.35■■□□□ 1.33
SPG7-205ENST00000561945 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
SPG7-205ENST00000561945 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
SPG7-205ENST00000561945 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
SPG7-205ENST00000561945 IQSEC2Q5JU85 1478 aa23.34■■□□□ 1.33
SPG7-205ENST00000561945 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
SPG7-205ENST00000561945 CEP170BQ9Y4F5 1589 aaPredicted RBP23.33■■□□□ 1.33
SPG7-205ENST00000561945 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
SPG7-205ENST00000561945 GGT6Q6P531 493 aa23.3■■□□□ 1.32
SPG7-205ENST00000561945 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
SPG7-205ENST00000561945 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
SPG7-205ENST00000561945 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
SPG7-205ENST00000561945 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
SPG7-205ENST00000561945 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
SPG7-205ENST00000561945 MAST1Q9Y2H9 1570 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms