RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 ARID4BQ4LE39 1312 aaPredicted RBP38■■■■□ 3.67
TMEM170A-202ENST00000561878 BCORL1Q5H9F3 1711 aa37.99■■■■□ 3.67
TMEM170A-202ENST00000561878 MAGI2Q86UL8 1455 aa37.99■■■■□ 3.67
TMEM170A-202ENST00000561878 POGZQ7Z3K3 1410 aa37.99■■■■□ 3.67
TMEM170A-202ENST00000561878 ZFYVE16Q7Z3T8 1539 aa37.98■■■■□ 3.67
TMEM170A-202ENST00000561878 ARHGAP5Q13017 1502 aa37.97■■■■□ 3.67
TMEM170A-202ENST00000561878 HECW2Q9P2P5 1572 aa37.93■■■■□ 3.66
TMEM170A-202ENST00000561878 YEATS2Q9ULM3 1422 aa37.89■■■■□ 3.66
TMEM170A-202ENST00000561878 PTPRMP28827 1452 aa37.88■■■■□ 3.65
TMEM170A-202ENST00000561878 CDC42BPBQ9Y5S2 1711 aa37.87■■■■□ 3.65
TMEM170A-202ENST00000561878 PREX2Q70Z35 1606 aa37.86■■■■□ 3.65
TMEM170A-202ENST00000561878 MADDQ8WXG6 1647 aa37.86■■■■□ 3.65
TMEM170A-202ENST00000561878 ZNF518AQ6AHZ1 1483 aa37.84■■■■□ 3.65
TMEM170A-202ENST00000561878 KDM5CP41229 1560 aa37.76■■■■□ 3.64
TMEM170A-202ENST00000561878 CDC42BPAQ5VT25 1732 aa37.75■■■■□ 3.63
TMEM170A-202ENST00000561878 ATP10AO60312 1499 aa37.75■■■■□ 3.63
TMEM170A-202ENST00000561878 RIMS1Q86UR5 1692 aaKnown RBP37.75■■■■□ 3.63
TMEM170A-202ENST00000561878 SIGLEC1Q9BZZ2 1709 aa37.75■■■■□ 3.63
TMEM170A-202ENST00000561878 C9orf84Q5VXU9 1444 aa37.74■■■■□ 3.63
TMEM170A-202ENST00000561878 CEP162Q5TB80 1403 aa37.72■■■■□ 3.63
TMEM170A-202ENST00000561878 ABCC1P33527 1531 aa37.71■■■■□ 3.63
TMEM170A-202ENST00000561878 AFAP1Q8N556 730 aa37.7■■■■□ 3.63
TMEM170A-202ENST00000561878 ITSN2Q9NZM3 1697 aa37.68■■■■□ 3.62
TMEM170A-202ENST00000561878 MYT1LQ9UL68 1186 aa37.67■■■■□ 3.62
TMEM170A-202ENST00000561878 MTUS2Q5JR59 1369 aa37.63■■■■□ 3.61
TMEM170A-202ENST00000561878 MLECQ14165 292 aa37.62■■■■□ 3.61
TMEM170A-202ENST00000561878 MLH3Q9UHC1 1453 aa37.62■■■■□ 3.61
TMEM170A-202ENST00000561878 FER1L4A9Z1Z3 1794 aa37.62■■■■□ 3.61
TMEM170A-202ENST00000561878 ARHGEF12Q9NZN5 1544 aa37.61■■■■□ 3.61
TMEM170A-202ENST00000561878 GPATCH8Q9UKJ3 1502 aaKnown RBP37.6■■■■□ 3.61
TMEM170A-202ENST00000561878 TRAPPC8Q9Y2L5 1435 aa37.6■■■■□ 3.61
TMEM170A-202ENST00000561878 DIP2CQ9Y2E4 1556 aa37.59■■■■□ 3.61
TMEM170A-202ENST00000561878 REREQ9P2R6 1566 aa37.56■■■■□ 3.6
TMEM170A-202ENST00000561878 SAMD9LQ8IVG5 1584 aa37.55■■■■□ 3.6
TMEM170A-202ENST00000561878 ABCA6Q8N139 1617 aa37.55■■■■□ 3.6
TMEM170A-202ENST00000561878 ZNF777Q9ULD5 760 aaPredicted RBP37.55■■■■□ 3.6
TMEM170A-202ENST00000561878 CCNB3Q8WWL7 1395 aa37.55■■■■□ 3.6
TMEM170A-202ENST00000561878 EHBP1L1Q8N3D4 1523 aa37.54■■■■□ 3.6
TMEM170A-202ENST00000561878 SYCP2Q9BX26 1530 aa37.5■■■■□ 3.59
TMEM170A-202ENST00000561878 CFDP1Q9UEE9 299 aaPredicted RBP37.49■■■■□ 3.59
TMEM170A-202ENST00000561878 PLEKHH2Q8IVE3 1493 aa37.49■■■■□ 3.59
TMEM170A-202ENST00000561878 KIDINS220Q9ULH0 1771 aa37.47■■■■□ 3.59
TMEM170A-202ENST00000561878 PLPPR3Q6T4P5 718 aa37.47■■■■□ 3.59
TMEM170A-202ENST00000561878 LMTK3Q96Q04 1460 aa37.46■■■■□ 3.59
TMEM170A-202ENST00000561878 KIAA1107Q9UPP5 1409 aa37.44■■■■□ 3.58
TMEM170A-202ENST00000561878 AGLP35573 1532 aa37.42■■■■□ 3.58
TMEM170A-202ENST00000561878 TIAM1Q13009 1591 aa37.42■■■■□ 3.58
TMEM170A-202ENST00000561878 LOC105371045A0A1W2PR82 267 aa37.4■■■■□ 3.58
TMEM170A-202ENST00000561878 HNRNPMP52272 730 aaKnown RBP eCLIP37.39■■■■□ 3.58
TMEM170A-202ENST00000561878 SPAG9O60271 1321 aaKnown RBP37.37■■■■□ 3.57
TMEM170A-202ENST00000561878 VPS8Q8N3P4 1428 aa37.34■■■■□ 3.57
TMEM170A-202ENST00000561878 SUPT6HQ7KZ85 1726 aaKnown RBP37.33■■■■□ 3.57
TMEM170A-202ENST00000561878 ATP7AQ04656 1500 aa37.32■■■■□ 3.57
TMEM170A-202ENST00000561878 INO80Q9ULG1 1556 aaPredicted RBP37.29■■■■□ 3.56
TMEM170A-202ENST00000561878 ESF1Q9H501 851 aaKnown RBP37.28■■■■□ 3.56
TMEM170A-202ENST00000561878 NCOA2Q15596 1464 aa37.26■■■■□ 3.56
TMEM170A-202ENST00000561878 PREX1Q8TCU6 1659 aa37.26■■■■□ 3.56
TMEM170A-202ENST00000561878 CEBPAP49715 358 aaPredicted RBP37.24■■■■□ 3.55
TMEM170A-202ENST00000561878 ZNF644Q9H582 1327 aaPredicted RBP37.22■■■■□ 3.55
TMEM170A-202ENST00000561878 HSPA2P54652 639 aa37.22■■■■□ 3.55
TMEM170A-202ENST00000561878 ILDR1Q86SU0 546 aaPredicted RBP37.2■■■■□ 3.55
TMEM170A-202ENST00000561878 CNTLNQ9NXG0 1405 aa37.19■■■■□ 3.54
TMEM170A-202ENST00000561878 C3P01024 1663 aa37.19■■■■□ 3.54
TMEM170A-202ENST00000561878 MBD5Q9P267 1494 aa37.19■■■■□ 3.54
TMEM170A-202ENST00000561878 A2MP01023 1474 aa37.18■■■■□ 3.54
TMEM170A-202ENST00000561878 PLXNC1O60486 1568 aa37.17■■■■□ 3.54
TMEM170A-202ENST00000561878 ADGBQ8N7X0 1667 aa37.16■■■■□ 3.54
TMEM170A-202ENST00000561878 LRRC9Q6ZRR7 1453 aa37.16■■■■□ 3.54
TMEM170A-202ENST00000561878 SETD1BQ9UPS6 1966 aaKnown RBP37.15■■■■□ 3.54
TMEM170A-202ENST00000561878 UHRF1BP1Q6BDS2 1440 aa37.13■■■■□ 3.53
TMEM170A-202ENST00000561878 MAP3K1Q13233 1512 aa37.13■■■■□ 3.53
TMEM170A-202ENST00000561878 CAMSAP2Q08AD1 1489 aa37.13■■■■□ 3.53
TMEM170A-202ENST00000561878 RTEL1-TNFRSF6BF6WH68 1400 aa37.11■■■■□ 3.53
TMEM170A-202ENST00000561878 MROH2AA6NES4 1674 aa37.1■■■■□ 3.53
TMEM170A-202ENST00000561878 CCDC141Q6ZP82 1450 aa37.09■■■■□ 3.53
TMEM170A-202ENST00000561878 RSPH4AQ5TD94 716 aa37.07■■■■□ 3.52
TMEM170A-202ENST00000561878 ARHGEF5Q12774 1597 aa37■■■■□ 3.51
TMEM170A-202ENST00000561878 CLTCQ00610 1675 aaKnown RBP36.99■■■■□ 3.51
TMEM170A-202ENST00000561878 ZMYM3Q14202 1370 aa36.97■■■■□ 3.51
TMEM170A-202ENST00000561878 GGT6Q6P531 493 aa36.97■■■■□ 3.51
TMEM170A-202ENST00000561878 NPATQ14207 1427 aa36.96■■■■□ 3.51
TMEM170A-202ENST00000561878 DHX29Q7Z478 1369 aaKnown RBP36.96■■■■□ 3.51
TMEM170A-202ENST00000561878 KANK4Q5T7N3 995 aaPredicted RBP36.96■■■■□ 3.51
TMEM170A-202ENST00000561878 PPP6R1Q9UPN7 881 aa36.96■■■■□ 3.51
TMEM170A-202ENST00000561878 APLP2Q06481 763 aa36.92■■■■□ 3.5
TMEM170A-202ENST00000561878 TSPY4P0CV99 314 aa36.91■■■■□ 3.5
TMEM170A-202ENST00000561878 TSPY10P0CW01 314 aa36.91■■■■□ 3.5
TMEM170A-202ENST00000561878 MYOM3Q5VTT5 1437 aa36.9■■■■□ 3.5
TMEM170A-202ENST00000561878 MIA2Q96PC5 1412 aa36.9■■■■□ 3.5
TMEM170A-202ENST00000561878 FBXO41Q8TF61 875 aa36.89■■■■□ 3.5
TMEM170A-202ENST00000561878 DMRT2Q9Y5R5 561 aa36.88■■■■□ 3.49
TMEM170A-202ENST00000561878 STRCQ7RTU9 1775 aa36.88■■■■□ 3.49
TMEM170A-202ENST00000561878 KIF3BO15066 747 aa36.82■■■■□ 3.48
TMEM170A-202ENST00000561878 MAST1Q9Y2H9 1570 aa36.82■■■■□ 3.48
TMEM170A-202ENST00000561878 FAM135AQ9P2D6 1515 aa36.8■■■■□ 3.48
TMEM170A-202ENST00000561878 PTPRKQ15262 1439 aa36.79■■■■□ 3.48
TMEM170A-202ENST00000561878 MYO3AQ8NEV4 1616 aa36.77■■■■□ 3.48
TMEM170A-202ENST00000561878 KDM5DQ9BY66 1539 aa36.75■■■■□ 3.47
TMEM170A-202ENST00000561878 ZNF142P52746 1687 aaPredicted RBP36.74■■■■□ 3.47
TMEM170A-202ENST00000561878 PTPRTO14522 1441 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms