RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
CRTC3-214ENST00000561290 ZFYVE16Q7Z3T8 1539 aa23.5■■□□□ 1.35
CRTC3-214ENST00000561290 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
CRTC3-214ENST00000561290 EFCAB2Q5VUJ9 269 aa23.48■■□□□ 1.35
CRTC3-214ENST00000561290 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
CRTC3-214ENST00000561290 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
CRTC3-214ENST00000561290 PREX2Q70Z35 1606 aa23.45■■□□□ 1.34
CRTC3-214ENST00000561290 PTPRMP28827 1452 aa23.44■■□□□ 1.34
CRTC3-214ENST00000561290 YEATS2Q9ULM3 1422 aa23.44■■□□□ 1.34
CRTC3-214ENST00000561290 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
CRTC3-214ENST00000561290 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
CRTC3-214ENST00000561290 MADDQ8WXG6 1647 aa23.43■■□□□ 1.34
CRTC3-214ENST00000561290 KDM5CP41229 1560 aa23.43■■□□□ 1.34
CRTC3-214ENST00000561290 ARID4BQ4LE39 1312 aaPredicted RBP23.4■■□□□ 1.34
CRTC3-214ENST00000561290 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.34
CRTC3-214ENST00000561290 ABCC1P33527 1531 aa23.37■■□□□ 1.33
CRTC3-214ENST00000561290 CDC42BPAQ5VT25 1732 aa23.36■■□□□ 1.33
CRTC3-214ENST00000561290 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
CRTC3-214ENST00000561290 ATP10AO60312 1499 aa23.35■■□□□ 1.33
CRTC3-214ENST00000561290 RIMS1Q86UR5 1692 aaKnown RBP23.34■■□□□ 1.33
CRTC3-214ENST00000561290 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
CRTC3-214ENST00000561290 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
CRTC3-214ENST00000561290 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
CRTC3-214ENST00000561290 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
CRTC3-214ENST00000561290 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
CRTC3-214ENST00000561290 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
CRTC3-214ENST00000561290 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
CRTC3-214ENST00000561290 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
CRTC3-214ENST00000561290 GPATCH8Q9UKJ3 1502 aaKnown RBP23.27■■□□□ 1.32
CRTC3-214ENST00000561290 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
CRTC3-214ENST00000561290 SAMD9LQ8IVG5 1584 aa23.25■■□□□ 1.31
CRTC3-214ENST00000561290 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
CRTC3-214ENST00000561290 EHBP1L1Q8N3D4 1523 aa23.24■■□□□ 1.31
CRTC3-214ENST00000561290 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
CRTC3-214ENST00000561290 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
CRTC3-214ENST00000561290 KIDINS220Q9ULH0 1771 aa23.2■■□□□ 1.3
CRTC3-214ENST00000561290 AGLP35573 1532 aa23.2■■□□□ 1.3
CRTC3-214ENST00000561290 PLEKHH2Q8IVE3 1493 aa23.2■■□□□ 1.3
CRTC3-214ENST00000561290 SYCP2Q9BX26 1530 aa23.19■■□□□ 1.3
CRTC3-214ENST00000561290 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
CRTC3-214ENST00000561290 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
CRTC3-214ENST00000561290 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
CRTC3-214ENST00000561290 MLECQ14165 292 aa23.15■■□□□ 1.3
CRTC3-214ENST00000561290 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
CRTC3-214ENST00000561290 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
CRTC3-214ENST00000561290 INO80Q9ULG1 1556 aaPredicted RBP23.12■■□□□ 1.29
CRTC3-214ENST00000561290 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
CRTC3-214ENST00000561290 ATP7AQ04656 1500 aa23.1■■□□□ 1.29
CRTC3-214ENST00000561290 VPS8Q8N3P4 1428 aa23.09■■□□□ 1.29
CRTC3-214ENST00000561290 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.29
CRTC3-214ENST00000561290 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
CRTC3-214ENST00000561290 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
CRTC3-214ENST00000561290 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
CRTC3-214ENST00000561290 HNRNPMP52272 730 aaKnown RBP eCLIP23.05■■□□□ 1.28
CRTC3-214ENST00000561290 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
CRTC3-214ENST00000561290 MBD5Q9P267 1494 aa23.04■■□□□ 1.28
CRTC3-214ENST00000561290 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
CRTC3-214ENST00000561290 C3P01024 1663 aa23.02■■□□□ 1.28
CRTC3-214ENST00000561290 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
CRTC3-214ENST00000561290 SETD1BQ9UPS6 1966 aaKnown RBP23.01■■□□□ 1.27
CRTC3-214ENST00000561290 LOC105371045A0A1W2PR82 267 aa23.01■■□□□ 1.27
CRTC3-214ENST00000561290 MROH2AA6NES4 1674 aa23■■□□□ 1.27
CRTC3-214ENST00000561290 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
CRTC3-214ENST00000561290 A2MP01023 1474 aa22.99■■□□□ 1.27
CRTC3-214ENST00000561290 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
CRTC3-214ENST00000561290 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
CRTC3-214ENST00000561290 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
CRTC3-214ENST00000561290 ZNF644Q9H582 1327 aaPredicted RBP22.97■■□□□ 1.27
CRTC3-214ENST00000561290 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
CRTC3-214ENST00000561290 ILDR1Q86SU0 546 aaPredicted RBP22.96■■□□□ 1.27
CRTC3-214ENST00000561290 UHRF1BP1Q6BDS2 1440 aa22.96■■□□□ 1.27
CRTC3-214ENST00000561290 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
CRTC3-214ENST00000561290 HSPA2P54652 639 aa22.95■■□□□ 1.26
CRTC3-214ENST00000561290 CCDC141Q6ZP82 1450 aa22.95■■□□□ 1.26
CRTC3-214ENST00000561290 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
CRTC3-214ENST00000561290 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
CRTC3-214ENST00000561290 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
CRTC3-214ENST00000561290 NPATQ14207 1427 aa22.9■■□□□ 1.26
CRTC3-214ENST00000561290 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
CRTC3-214ENST00000561290 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
CRTC3-214ENST00000561290 DHX29Q7Z478 1369 aaKnown RBP22.86■■□□□ 1.25
CRTC3-214ENST00000561290 FAM135AQ9P2D6 1515 aa22.85■■□□□ 1.25
CRTC3-214ENST00000561290 ZMYM3Q14202 1370 aa22.85■■□□□ 1.25
CRTC3-214ENST00000561290 MIA2Q96PC5 1412 aa22.84■■□□□ 1.25
CRTC3-214ENST00000561290 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
CRTC3-214ENST00000561290 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
CRTC3-214ENST00000561290 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
CRTC3-214ENST00000561290 KANK4Q5T7N3 995 aaPredicted RBP22.8■■□□□ 1.24
CRTC3-214ENST00000561290 FBXO41Q8TF61 875 aa22.8■■□□□ 1.24
CRTC3-214ENST00000561290 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
CRTC3-214ENST00000561290 GGT6Q6P531 493 aa22.78■■□□□ 1.24
CRTC3-214ENST00000561290 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
CRTC3-214ENST00000561290 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
CRTC3-214ENST00000561290 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
CRTC3-214ENST00000561290 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
CRTC3-214ENST00000561290 TSPY4P0CV99 314 aa22.75■■□□□ 1.23
CRTC3-214ENST00000561290 TSPY10P0CW01 314 aa22.75■■□□□ 1.23
CRTC3-214ENST00000561290 PTPRTO14522 1441 aa22.74■■□□□ 1.23
CRTC3-214ENST00000561290 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
CRTC3-214ENST00000561290 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms