RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GZF1Q9H116 711 aaPredicted RBP3.19□□□□□ -1.9
RTF1-207ENST00000561076 PRR29P0C7W0 189 aa3.18□□□□□ -1.9
RTF1-207ENST00000561076 MFAP1P55081 439 aaKnown RBP3.18□□□□□ -1.9
RTF1-207ENST00000561076 RBM26Q5T8P6 1007 aaKnown RBP3.18□□□□□ -1.9
RTF1-207ENST00000561076 CLUAP1Q96AJ1 413 aa3.18□□□□□ -1.9
RTF1-207ENST00000561076 FAM117AQ9C073 453 aa3.18□□□□□ -1.9
RTF1-207ENST00000561076 ZNF777Q9ULD5 760 aaPredicted RBP3.18□□□□□ -1.9
RTF1-207ENST00000561076 MTMR7Q9Y216 660 aa3.18□□□□□ -1.9
RTF1-207ENST00000561076 TTLL12Q14166 644 aaPredicted RBP3.17□□□□□ -1.9
RTF1-207ENST00000561076 PROSER2Q86WR7 435 aaPredicted RBP3.17□□□□□ -1.9
RTF1-207ENST00000561076 SPDYE1Q8NFV5 336 aaPredicted RBP3.17□□□□□ -1.9
RTF1-207ENST00000561076 DDX27Q96GQ7 796 aaKnown RBP3.17□□□□□ -1.9
RTF1-207ENST00000561076 USP35Q9P2H5 1018 aa3.17□□□□□ -1.9
RTF1-207ENST00000561076 CLEC11AQ9Y240 323 aa3.17□□□□□ -1.9
RTF1-207ENST00000561076 C1QBPQ07021 282 aaKnown RBP3.16□□□□□ -1.9
RTF1-207ENST00000561076 RASEFQ8IZ41 740 aa3.16□□□□□ -1.9
RTF1-207ENST00000561076 NUTM2FA1L443 756 aa3.15□□□□□ -1.91
RTF1-207ENST00000561076 EIF5BO60841 1220 aaKnown RBP3.15□□□□□ -1.91
RTF1-207ENST00000561076 FOXD4L5Q5VV16 416 aaPredicted RBP3.15□□□□□ -1.91
RTF1-207ENST00000561076 FOXD4L4Q8WXT5 416 aaPredicted RBP3.15□□□□□ -1.91
RTF1-207ENST00000561076 MINK1Q8N4C8 1332 aaPredicted RBP3.15□□□□□ -1.91
RTF1-207ENST00000561076 LOC105371045A0A1W2PR82 267 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 SOX12O15370 315 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 PSEN1P49768 467 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 GOLGA2Q08379 1002 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 RGS22Q8NE09 1264 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 MFRPQ9BY79 579 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 GOPCQ9HD26 462 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 PRM3Q9NNZ6 103 aa3.14□□□□□ -1.91
RTF1-207ENST00000561076 SPDYE16A6NNV3 312 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 PPP1R15AO75807 674 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 MLLT3P42568 568 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 MAP2K5Q13163 448 aa3.13□□□□□ -1.91
RTF1-207ENST00000561076 RETREG2Q8NC44 543 aa3.13□□□□□ -1.91
RTF1-207ENST00000561076 TSPYL2Q9H2G4 693 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 ZNF330Q9Y3S2 320 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 ARIH1Q9Y4X5 557 aaPredicted RBP3.13□□□□□ -1.91
RTF1-207ENST00000561076 PLEKHG3A1L390 1219 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 IGSF3O75054 1194 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 PPP1R37O75864 691 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 MCM6Q14566 821 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 CCDC102AQ96A19 550 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 PUS7Q96PZ0 661 aaKnown RBP3.12□□□□□ -1.91
RTF1-207ENST00000561076 RNF39Q9H2S5 420 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 CABP2Q9NPB3 220 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 PCDHB8Q9UN66 801 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 PCDHB13Q9Y5F0 798 aa3.12□□□□□ -1.91
RTF1-207ENST00000561076 CSB-PGBD3P0DP91 1061 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 KCNA1Q09470 495 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 AMHR2Q16671 573 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 RSPH4AQ5TD94 716 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 PARP9Q8IXQ6 854 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 EFCAB3Q8N7B9 438 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 CREBZFQ9NS37 354 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 PHF8Q9UPP1 1060 aa3.11□□□□□ -1.91
RTF1-207ENST00000561076 GRXCR2A6NFK2 248 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 IRF6O14896 467 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 PAK3O75914 559 aaPredicted RBP3.1□□□□□ -1.91
RTF1-207ENST00000561076 DSG3P32926 999 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 MFSD10Q14728 455 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 CCDC27Q2M243 656 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 CALR3Q96L12 384 aaKnown RBP3.1□□□□□ -1.91
RTF1-207ENST00000561076 NCKAP5LQ9HCH0 1330 aa3.1□□□□□ -1.91
RTF1-207ENST00000561076 DPYSL4O14531 572 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 GNPATO15228 680 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 FCHSD2O94868 740 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 CAMK2BQ13554 666 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 HIC1Q14526 733 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 SH3D19Q5HYK7 790 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 PPP1R15BQ5SWA1 713 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 ZNF579Q8NAF0 562 aaKnown RBP3.09□□□□□ -1.91
RTF1-207ENST00000561076 ZNF428Q96B54 188 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 POLR3GLQ9BT43 218 aa3.09□□□□□ -1.91
RTF1-207ENST00000561076 SPDYE5A6NIY4 337 aa3.08□□□□□ -1.92
RTF1-207ENST00000561076 ONECUT3O60422 494 aaPredicted RBP3.08□□□□□ -1.92
RTF1-207ENST00000561076 BRD1O95696 1058 aa3.08□□□□□ -1.92
RTF1-207ENST00000561076 SKIV2LQ15477 1246 aaKnown RBP3.08□□□□□ -1.92
RTF1-207ENST00000561076 GIGYF2Q6Y7W6 1299 aaKnown RBP3.08□□□□□ -1.92
RTF1-207ENST00000561076 CRISPLD2Q9H0B8 497 aa3.08□□□□□ -1.92
RTF1-207ENST00000561076 AMOTL2Q9Y2J4 779 aa3.08□□□□□ -1.92
RTF1-207ENST00000561076 CLCN1P35523 988 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 MAP3K9P80192 1104 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 IRF5Q13568 498 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 FBXO22Q8NEZ5 403 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 POM121Q96HA1 1249 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 BCL11AQ9H165 835 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 PLSCR2Q9NRY7 297 aa3.07□□□□□ -1.92
RTF1-207ENST00000561076 ABL2P42684 1182 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 MNX1P50219 401 aaPredicted RBP3.06□□□□□ -1.92
RTF1-207ENST00000561076 PDIA6Q15084 440 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 B4GALNT3Q6L9W6 998 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 TMC2Q8TDI7 906 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 RBM42Q9BTD8 480 aaKnown RBP3.06□□□□□ -1.92
RTF1-207ENST00000561076 POLR3EQ9NVU0 708 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 USTQ9Y2C2 406 aa3.06□□□□□ -1.92
RTF1-207ENST00000561076 PPM1GO15355 546 aaPredicted RBP3.05□□□□□ -1.92
RTF1-207ENST00000561076 RFX1P22670 979 aa3.05□□□□□ -1.92
RTF1-207ENST00000561076 CANXP27824 592 aaKnown RBP3.05□□□□□ -1.92
RTF1-207ENST00000561076 TMEM259Q4ZIN3 620 aa3.05□□□□□ -1.92
RTF1-207ENST00000561076 FNBP4Q8N3X1 1017 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms