RNA–Protein interactions for RNA: ENST00000561073.1

LINS1-212, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-212ENST00000561073 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
LINS1-212ENST00000561073 KIF3CO14782 793 aa11.58□□□□□ -0.56
LINS1-212ENST00000561073 HOXB1P14653 301 aaPredicted RBP11.58□□□□□ -0.56
LINS1-212ENST00000561073 EMP3P54852 163 aa11.58□□□□□ -0.56
LINS1-212ENST00000561073 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
LINS1-212ENST00000561073 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
LINS1-212ENST00000561073 PPP1R37O75864 691 aa11.54□□□□□ -0.56
LINS1-212ENST00000561073 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
LINS1-212ENST00000561073 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
LINS1-212ENST00000561073 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
LINS1-212ENST00000561073 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
LINS1-212ENST00000561073 SLC34A2O95436 690 aa11.5□□□□□ -0.57
LINS1-212ENST00000561073 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
LINS1-212ENST00000561073 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
LINS1-212ENST00000561073 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
LINS1-212ENST00000561073 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
LINS1-212ENST00000561073 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
LINS1-212ENST00000561073 FOXK1P85037 733 aa11.44□□□□□ -0.58
LINS1-212ENST00000561073 ERBB3P21860 1342 aa11.43□□□□□ -0.58
LINS1-212ENST00000561073 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
LINS1-212ENST00000561073 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
LINS1-212ENST00000561073 ARSIQ5FYB1 569 aa11.38□□□□□ -0.59
LINS1-212ENST00000561073 CRISPLD2Q9H0B8 497 aa11.38□□□□□ -0.59
LINS1-212ENST00000561073 RTN4Q9NQC3 1192 aaKnown RBP11.38□□□□□ -0.59
LINS1-212ENST00000561073 PDE4AP27815 886 aa11.36□□□□□ -0.59
LINS1-212ENST00000561073 PTCD2Q8WV60 388 aaKnown RBP11.36□□□□□ -0.59
LINS1-212ENST00000561073 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
LINS1-212ENST00000561073 VARS2Q5ST30 1063 aaKnown RBP11.35□□□□□ -0.59
LINS1-212ENST00000561073 PLPP6Q8IY26 295 aa11.35□□□□□ -0.59
LINS1-212ENST00000561073 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
LINS1-212ENST00000561073 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
LINS1-212ENST00000561073 TBC1D12O60347 775 aa11.34□□□□□ -0.59
LINS1-212ENST00000561073 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
LINS1-212ENST00000561073 ZNF687Q8N1G0 1237 aa11.34□□□□□ -0.59
LINS1-212ENST00000561073 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
LINS1-212ENST00000561073 DSG2Q14126 1118 aa11.33□□□□□ -0.6
LINS1-212ENST00000561073 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
LINS1-212ENST00000561073 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
LINS1-212ENST00000561073 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
LINS1-212ENST00000561073 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
LINS1-212ENST00000561073 NUDT7P0C024 238 aa11.29□□□□□ -0.6
LINS1-212ENST00000561073 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
LINS1-212ENST00000561073 PBX2P40425 430 aa11.26□□□□□ -0.61
LINS1-212ENST00000561073 MFSD10Q14728 455 aa11.26□□□□□ -0.61
LINS1-212ENST00000561073 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
LINS1-212ENST00000561073 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINS1-212ENST00000561073 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
LINS1-212ENST00000561073 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
LINS1-212ENST00000561073 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
LINS1-212ENST00000561073 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
LINS1-212ENST00000561073 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
LINS1-212ENST00000561073 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
LINS1-212ENST00000561073 PTGER2P43116 358 aa11.21□□□□□ -0.61
LINS1-212ENST00000561073 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
LINS1-212ENST00000561073 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
LINS1-212ENST00000561073 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
LINS1-212ENST00000561073 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINS1-212ENST00000561073 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINS1-212ENST00000561073 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
LINS1-212ENST00000561073 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
LINS1-212ENST00000561073 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
LINS1-212ENST00000561073 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
LINS1-212ENST00000561073 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
LINS1-212ENST00000561073 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
LINS1-212ENST00000561073 EVI5O60447 810 aa11.07□□□□□ -0.64
LINS1-212ENST00000561073 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
LINS1-212ENST00000561073 TK2O00142 265 aa11.06□□□□□ -0.64
LINS1-212ENST00000561073 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
LINS1-212ENST00000561073 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
LINS1-212ENST00000561073 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
LINS1-212ENST00000561073 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
LINS1-212ENST00000561073 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
LINS1-212ENST00000561073 FOSBP53539 338 aa11.04□□□□□ -0.64
LINS1-212ENST00000561073 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
LINS1-212ENST00000561073 RNF166Q96A37 237 aaPredicted RBP11.03□□□□□ -0.64
LINS1-212ENST00000561073 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
LINS1-212ENST00000561073 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
LINS1-212ENST00000561073 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
LINS1-212ENST00000561073 PTPREP23469 700 aa10.98□□□□□ -0.65
LINS1-212ENST00000561073 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
LINS1-212ENST00000561073 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
LINS1-212ENST00000561073 SLC4A5Q9BY07 1137 aa10.98□□□□□ -0.65
LINS1-212ENST00000561073 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
LINS1-212ENST00000561073 PHF14O94880 888 aa10.97□□□□□ -0.65
LINS1-212ENST00000561073 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
LINS1-212ENST00000561073 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
LINS1-212ENST00000561073 E2F4Q16254 413 aa10.95□□□□□ -0.66
LINS1-212ENST00000561073 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
LINS1-212ENST00000561073 DPYSL4O14531 572 aa10.94□□□□□ -0.66
LINS1-212ENST00000561073 PSEN2P49810 448 aa10.94□□□□□ -0.66
LINS1-212ENST00000561073 EPAS1Q99814 870 aa10.94□□□□□ -0.66
LINS1-212ENST00000561073 PDIA6Q15084 440 aa10.93□□□□□ -0.66
LINS1-212ENST00000561073 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
LINS1-212ENST00000561073 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
LINS1-212ENST00000561073 HRO43593 1189 aa10.92□□□□□ -0.66
LINS1-212ENST00000561073 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
LINS1-212ENST00000561073 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
LINS1-212ENST00000561073 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
LINS1-212ENST00000561073 ADAM33Q9BZ11 813 aa10.89□□□□□ -0.67
LINS1-212ENST00000561073 PPP1R3GB7ZBB8 358 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms