RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-221ENST00000561055 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-221ENST00000561055 APLP2Q06481 763 aa15.13■□□□□ 0.01
RABGGTA-221ENST00000561055 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
RABGGTA-221ENST00000561055 AKNAQ7Z591 1439 aa15.12■□□□□ 0.01
RABGGTA-221ENST00000561055 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-221ENST00000561055 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
RABGGTA-221ENST00000561055 ARHGAP5Q13017 1502 aa15.12■□□□□ 0.01
RABGGTA-221ENST00000561055 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
RABGGTA-221ENST00000561055 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
RABGGTA-221ENST00000561055 FRMPD1Q5SYB0 1578 aa15.07■□□□□ 0
RABGGTA-221ENST00000561055 ADGRL1O94910 1474 aa15.07■□□□□ 0
RABGGTA-221ENST00000561055 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
RABGGTA-221ENST00000561055 ABCC1P33527 1531 aa15.06■□□□□ 0
RABGGTA-221ENST00000561055 DENND4BO75064 1496 aaPredicted RBP15.05■□□□□ -0
RABGGTA-221ENST00000561055 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
RABGGTA-221ENST00000561055 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
RABGGTA-221ENST00000561055 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
RABGGTA-221ENST00000561055 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
RABGGTA-221ENST00000561055 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
RABGGTA-221ENST00000561055 KDM5CP41229 1560 aa15.02■□□□□ -0
RABGGTA-221ENST00000561055 MIA2Q96PC5 1412 aa15.02■□□□□ -0
RABGGTA-221ENST00000561055 ARHGEF12Q9NZN5 1544 aa15.02□□□□□ -0.01
RABGGTA-221ENST00000561055 MYOM3Q5VTT5 1437 aa15.01□□□□□ -0.01
RABGGTA-221ENST00000561055 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
RABGGTA-221ENST00000561055 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
RABGGTA-221ENST00000561055 RAPGEF3O95398 923 aa15□□□□□ -0.01
RABGGTA-221ENST00000561055 MAGI2Q86UL8 1455 aa15□□□□□ -0.01
RABGGTA-221ENST00000561055 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
RABGGTA-221ENST00000561055 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
RABGGTA-221ENST00000561055 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
RABGGTA-221ENST00000561055 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
RABGGTA-221ENST00000561055 PTPN23Q9H3S7 1636 aa14.96□□□□□ -0.01
RABGGTA-221ENST00000561055 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.01
RABGGTA-221ENST00000561055 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.01
RABGGTA-221ENST00000561055 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-221ENST00000561055 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
RABGGTA-221ENST00000561055 MLH3Q9UHC1 1453 aa14.95□□□□□ -0.02
RABGGTA-221ENST00000561055 RSPH4AQ5TD94 716 aa14.95□□□□□ -0.02
RABGGTA-221ENST00000561055 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-221ENST00000561055 FGD6Q6ZV73 1430 aa14.94□□□□□ -0.02
RABGGTA-221ENST00000561055 ARHGEF40Q8TER5 1519 aa14.94□□□□□ -0.02
RABGGTA-221ENST00000561055 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-221ENST00000561055 HNRNPMP52272 730 aaKnown RBP eCLIP14.93□□□□□ -0.02
RABGGTA-221ENST00000561055 AFAP1Q8N556 730 aa14.93□□□□□ -0.02
RABGGTA-221ENST00000561055 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
RABGGTA-221ENST00000561055 INO80Q9ULG1 1556 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-221ENST00000561055 CROCC2H7BZ55 1655 aa14.9□□□□□ -0.02
RABGGTA-221ENST00000561055 REREQ9P2R6 1566 aa14.9□□□□□ -0.02
RABGGTA-221ENST00000561055 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
RABGGTA-221ENST00000561055 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
RABGGTA-221ENST00000561055 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
RABGGTA-221ENST00000561055 DNMT1P26358 1616 aaKnown RBP14.89□□□□□ -0.03
RABGGTA-221ENST00000561055 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
RABGGTA-221ENST00000561055 ATP7AQ04656 1500 aa14.89□□□□□ -0.03
RABGGTA-221ENST00000561055 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
RABGGTA-221ENST00000561055 DIP2CQ9Y2E4 1556 aa14.89□□□□□ -0.03
RABGGTA-221ENST00000561055 ADGBQ8N7X0 1667 aa14.88□□□□□ -0.03
RABGGTA-221ENST00000561055 ATP10AO60312 1499 aa14.88□□□□□ -0.03
RABGGTA-221ENST00000561055 SIGLEC1Q9BZZ2 1709 aa14.87□□□□□ -0.03
RABGGTA-221ENST00000561055 SPAG9O60271 1321 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-221ENST00000561055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
RABGGTA-221ENST00000561055 SHANK2Q9UPX8 1470 aa14.84□□□□□ -0.03
RABGGTA-221ENST00000561055 PPARGC1BQ86YN6 1023 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-221ENST00000561055 C9orf84Q5VXU9 1444 aa14.83□□□□□ -0.03
RABGGTA-221ENST00000561055 PLXNC1O60486 1568 aa14.83□□□□□ -0.04
RABGGTA-221ENST00000561055 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
RABGGTA-221ENST00000561055 ABCC5O15440 1437 aa14.83□□□□□ -0.04
RABGGTA-221ENST00000561055 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.04
RABGGTA-221ENST00000561055 AGLP35573 1532 aa14.82□□□□□ -0.04
RABGGTA-221ENST00000561055 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
RABGGTA-221ENST00000561055 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
RABGGTA-221ENST00000561055 DAPK1P53355 1430 aa14.82□□□□□ -0.04
RABGGTA-221ENST00000561055 ADAMTSL3P82987 1691 aa14.81□□□□□ -0.04
RABGGTA-221ENST00000561055 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
RABGGTA-221ENST00000561055 A2MP01023 1474 aa14.78□□□□□ -0.04
RABGGTA-221ENST00000561055 ADGRL2O95490 1459 aa14.77□□□□□ -0.04
RABGGTA-221ENST00000561055 DHX29Q7Z478 1369 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-221ENST00000561055 FAM50AQ14320 339 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-221ENST00000561055 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-221ENST00000561055 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
RABGGTA-221ENST00000561055 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
RABGGTA-221ENST00000561055 NCOA1Q15788 1441 aa14.74□□□□□ -0.05
RABGGTA-221ENST00000561055 DUOX2Q9NRD8 1548 aa14.73□□□□□ -0.05
RABGGTA-221ENST00000561055 PTPRKQ15262 1439 aa14.73□□□□□ -0.05
RABGGTA-221ENST00000561055 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
RABGGTA-221ENST00000561055 ARID4BQ4LE39 1312 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-221ENST00000561055 MADDQ8WXG6 1647 aa14.71□□□□□ -0.05
RABGGTA-221ENST00000561055 ROCK1Q13464 1354 aa14.71□□□□□ -0.06
RABGGTA-221ENST00000561055 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-221ENST00000561055 MROH2AA6NES4 1674 aa14.69□□□□□ -0.06
RABGGTA-221ENST00000561055 RIMS1Q86UR5 1692 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-221ENST00000561055 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
RABGGTA-221ENST00000561055 ERBINQ96RT1 1412 aa14.68□□□□□ -0.06
RABGGTA-221ENST00000561055 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
RABGGTA-221ENST00000561055 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
RABGGTA-221ENST00000561055 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
RABGGTA-221ENST00000561055 CHIC2Q9UKJ5 165 aa14.67□□□□□ -0.06
RABGGTA-221ENST00000561055 SETD1BQ9UPS6 1966 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-221ENST00000561055 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms