RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
HMG20A-212ENST00000560986 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
HMG20A-212ENST00000560986 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
HMG20A-212ENST00000560986 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
HMG20A-212ENST00000560986 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
HMG20A-212ENST00000560986 NLRP6P59044 892 aa10.77□□□□□ -0.69
HMG20A-212ENST00000560986 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
HMG20A-212ENST00000560986 ZNF710Q8N1W2 664 aa10.77□□□□□ -0.69
HMG20A-212ENST00000560986 BBXQ8WY36 941 aaPredicted RBP10.77□□□□□ -0.69
HMG20A-212ENST00000560986 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
HMG20A-212ENST00000560986 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
HMG20A-212ENST00000560986 KRTAP3-3Q9BYR6 98 aa10.76□□□□□ -0.69
HMG20A-212ENST00000560986 KRTAP3-2Q9BYR7 98 aa10.76□□□□□ -0.69
HMG20A-212ENST00000560986 MFRPQ9BY79 579 aa10.75□□□□□ -0.69
HMG20A-212ENST00000560986 STK25O00506 426 aa10.74□□□□□ -0.69
HMG20A-212ENST00000560986 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
HMG20A-212ENST00000560986 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
HMG20A-212ENST00000560986 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
HMG20A-212ENST00000560986 ERBB3P21860 1342 aa10.68□□□□□ -0.7
HMG20A-212ENST00000560986 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
HMG20A-212ENST00000560986 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
HMG20A-212ENST00000560986 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
HMG20A-212ENST00000560986 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
HMG20A-212ENST00000560986 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
HMG20A-212ENST00000560986 HS6ST3Q8IZP7 471 aa10.64□□□□□ -0.71
HMG20A-212ENST00000560986 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
HMG20A-212ENST00000560986 ZCCHC6Q5VYS8 1495 aaKnown RBP10.62□□□□□ -0.71
HMG20A-212ENST00000560986 KIF3CO14782 793 aa10.62□□□□□ -0.71
HMG20A-212ENST00000560986 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
HMG20A-212ENST00000560986 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
HMG20A-212ENST00000560986 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
HMG20A-212ENST00000560986 KHSRPQ92945 711 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMG20A-212ENST00000560986 DCAF1Q9Y4B6 1507 aa10.59□□□□□ -0.71
HMG20A-212ENST00000560986 PPP1R37O75864 691 aa10.59□□□□□ -0.71
HMG20A-212ENST00000560986 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
HMG20A-212ENST00000560986 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
HMG20A-212ENST00000560986 ZNF687Q8N1G0 1237 aa10.56□□□□□ -0.72
HMG20A-212ENST00000560986 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
HMG20A-212ENST00000560986 MYO15BQ96JP2 1530 aa10.5□□□□□ -0.73
HMG20A-212ENST00000560986 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
HMG20A-212ENST00000560986 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
HMG20A-212ENST00000560986 SLC34A2O95436 690 aa10.48□□□□□ -0.73
HMG20A-212ENST00000560986 NUDT7P0C024 238 aa10.48□□□□□ -0.73
HMG20A-212ENST00000560986 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
HMG20A-212ENST00000560986 PCDHGA4Q9Y5G9 962 aa10.47□□□□□ -0.73
HMG20A-212ENST00000560986 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
HMG20A-212ENST00000560986 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
HMG20A-212ENST00000560986 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
HMG20A-212ENST00000560986 ANKRD13DQ6ZTN6 518 aa10.41□□□□□ -0.74
HMG20A-212ENST00000560986 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
HMG20A-212ENST00000560986 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
HMG20A-212ENST00000560986 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
HMG20A-212ENST00000560986 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
HMG20A-212ENST00000560986 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
HMG20A-212ENST00000560986 LSM11P83369 360 aaKnown RBP eCLIP10.38□□□□□ -0.75
HMG20A-212ENST00000560986 FOXK1P85037 733 aa10.38□□□□□ -0.75
HMG20A-212ENST00000560986 PLPP6Q8IY26 295 aa10.37□□□□□ -0.75
HMG20A-212ENST00000560986 PTCD2Q8WV60 388 aaKnown RBP10.37□□□□□ -0.75
HMG20A-212ENST00000560986 DSG2Q14126 1118 aa10.36□□□□□ -0.75
HMG20A-212ENST00000560986 BCANQ96GW7 911 aa10.36□□□□□ -0.75
HMG20A-212ENST00000560986 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
HMG20A-212ENST00000560986 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
HMG20A-212ENST00000560986 PBX2P40425 430 aa10.33□□□□□ -0.76
HMG20A-212ENST00000560986 PTGER2P43116 358 aa10.33□□□□□ -0.76
HMG20A-212ENST00000560986 NACADO15069 1562 aa10.28□□□□□ -0.76
HMG20A-212ENST00000560986 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
HMG20A-212ENST00000560986 ARHGAP33O14559 1287 aa10.27□□□□□ -0.77
HMG20A-212ENST00000560986 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
HMG20A-212ENST00000560986 TBC1D12O60347 775 aa10.24□□□□□ -0.77
HMG20A-212ENST00000560986 PSEN2P49810 448 aa10.23□□□□□ -0.77
HMG20A-212ENST00000560986 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
HMG20A-212ENST00000560986 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
HMG20A-212ENST00000560986 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
HMG20A-212ENST00000560986 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
HMG20A-212ENST00000560986 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMG20A-212ENST00000560986 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
HMG20A-212ENST00000560986 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
HMG20A-212ENST00000560986 TK2O00142 265 aa10.17□□□□□ -0.78
HMG20A-212ENST00000560986 HRO43593 1189 aa10.17□□□□□ -0.78
HMG20A-212ENST00000560986 PDE4AP27815 886 aa10.17□□□□□ -0.78
HMG20A-212ENST00000560986 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
HMG20A-212ENST00000560986 ABCC9O60706 1549 aa10.13□□□□□ -0.79
HMG20A-212ENST00000560986 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
HMG20A-212ENST00000560986 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
HMG20A-212ENST00000560986 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
HMG20A-212ENST00000560986 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
HMG20A-212ENST00000560986 NBR1Q14596 966 aa10.11□□□□□ -0.79
HMG20A-212ENST00000560986 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
HMG20A-212ENST00000560986 FOSBP53539 338 aa10.1□□□□□ -0.79
HMG20A-212ENST00000560986 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
HMG20A-212ENST00000560986 MFSD10Q14728 455 aa10.09□□□□□ -0.79
HMG20A-212ENST00000560986 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
HMG20A-212ENST00000560986 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
HMG20A-212ENST00000560986 EVI5O60447 810 aa10.08□□□□□ -0.8
HMG20A-212ENST00000560986 VPS9D1Q9Y2B5 631 aa10.08□□□□□ -0.8
HMG20A-212ENST00000560986 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
HMG20A-212ENST00000560986 PRKCSHP14314 528 aaPredicted RBP10.05□□□□□ -0.8
HMG20A-212ENST00000560986 KCNH8Q96L42 1107 aa10.05□□□□□ -0.8
HMG20A-212ENST00000560986 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
HMG20A-212ENST00000560986 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms