RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 ARHGEF40Q8TER5 1519 aa32.1■■■□□ 2.73
IPO4-215ENST00000560935 LOC105371045A0A1W2PR82 267 aa32.09■■■□□ 2.73
IPO4-215ENST00000560935 POGZQ7Z3K3 1410 aa32.07■■■□□ 2.72
IPO4-215ENST00000560935 PREX2Q70Z35 1606 aa32.07■■■□□ 2.72
IPO4-215ENST00000560935 CDC42BPBQ9Y5S2 1711 aa32.06■■■□□ 2.72
IPO4-215ENST00000560935 MAGI2Q86UL8 1455 aa32.03■■■□□ 2.72
IPO4-215ENST00000560935 ZFYVE16Q7Z3T8 1539 aa32.01■■■□□ 2.72
IPO4-215ENST00000560935 CDC42BPAQ5VT25 1732 aa32■■■□□ 2.71
IPO4-215ENST00000560935 MTUS2Q5JR59 1369 aa31.98■■■□□ 2.71
IPO4-215ENST00000560935 ZNF518AQ6AHZ1 1483 aa31.97■■■□□ 2.71
IPO4-215ENST00000560935 ARID4BQ4LE39 1312 aaPredicted RBP31.96■■■□□ 2.71
IPO4-215ENST00000560935 YEATS2Q9ULM3 1422 aa31.94■■■□□ 2.7
IPO4-215ENST00000560935 BCORL1Q5H9F3 1711 aa31.92■■■□□ 2.7
IPO4-215ENST00000560935 ABCC1P33527 1531 aa31.92■■■□□ 2.7
IPO4-215ENST00000560935 EHBP1L1Q8N3D4 1523 aa31.92■■■□□ 2.7
IPO4-215ENST00000560935 ADAMTSL3P82987 1691 aa31.91■■■□□ 2.7
IPO4-215ENST00000560935 KDM5CP41229 1560 aa31.9■■■□□ 2.7
IPO4-215ENST00000560935 VPS8Q8N3P4 1428 aa31.89■■■□□ 2.7
IPO4-215ENST00000560935 GPATCH8Q9UKJ3 1502 aaKnown RBP31.89■■■□□ 2.7
IPO4-215ENST00000560935 ITSN2Q9NZM3 1697 aa31.88■■■□□ 2.69
IPO4-215ENST00000560935 CCNB3Q8WWL7 1395 aa31.86■■■□□ 2.69
IPO4-215ENST00000560935 AFAP1Q8N556 730 aa31.86■■■□□ 2.69
IPO4-215ENST00000560935 HECW2Q9P2P5 1572 aa31.85■■■□□ 2.69
IPO4-215ENST00000560935 ARHGEF12Q9NZN5 1544 aa31.83■■■□□ 2.69
IPO4-215ENST00000560935 ATP10AO60312 1499 aa31.83■■■□□ 2.69
IPO4-215ENST00000560935 SAMD9LQ8IVG5 1584 aa31.82■■■□□ 2.68
IPO4-215ENST00000560935 ZNF777Q9ULD5 760 aaPredicted RBP31.82■■■□□ 2.68
IPO4-215ENST00000560935 MYT1LQ9UL68 1186 aa31.81■■■□□ 2.68
IPO4-215ENST00000560935 MADDQ8WXG6 1647 aa31.81■■■□□ 2.68
IPO4-215ENST00000560935 C9orf84Q5VXU9 1444 aa31.81■■■□□ 2.68
IPO4-215ENST00000560935 TRAPPC8Q9Y2L5 1435 aa31.81■■■□□ 2.68
IPO4-215ENST00000560935 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
IPO4-215ENST00000560935 SIGLEC1Q9BZZ2 1709 aa31.8■■■□□ 2.68
IPO4-215ENST00000560935 CFDP1Q9UEE9 299 aaPredicted RBP31.79■■■□□ 2.68
IPO4-215ENST00000560935 PTPRMP28827 1452 aa31.78■■■□□ 2.68
IPO4-215ENST00000560935 MLH3Q9UHC1 1453 aa31.78■■■□□ 2.68
IPO4-215ENST00000560935 SYCP2Q9BX26 1530 aa31.76■■■□□ 2.68
IPO4-215ENST00000560935 PLEKHH2Q8IVE3 1493 aa31.76■■■□□ 2.67
IPO4-215ENST00000560935 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
IPO4-215ENST00000560935 DIP2CQ9Y2E4 1556 aa31.74■■■□□ 2.67
IPO4-215ENST00000560935 RIMS1Q86UR5 1692 aaKnown RBP31.72■■■□□ 2.67
IPO4-215ENST00000560935 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
IPO4-215ENST00000560935 KIAA1107Q9UPP5 1409 aa31.71■■■□□ 2.67
IPO4-215ENST00000560935 NCOA2Q15596 1464 aa31.69■■■□□ 2.66
IPO4-215ENST00000560935 REREQ9P2R6 1566 aa31.68■■■□□ 2.66
IPO4-215ENST00000560935 MLECQ14165 292 aa31.68■■■□□ 2.66
IPO4-215ENST00000560935 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
IPO4-215ENST00000560935 HNRNPMP52272 730 aaKnown RBP eCLIP31.67■■■□□ 2.66
IPO4-215ENST00000560935 LRRC9Q6ZRR7 1453 aa31.66■■■□□ 2.66
IPO4-215ENST00000560935 MAP3K1Q13233 1512 aa31.66■■■□□ 2.66
IPO4-215ENST00000560935 FER1L4A9Z1Z3 1794 aa31.66■■■□□ 2.66
IPO4-215ENST00000560935 SPAG9O60271 1321 aaKnown RBP31.62■■■□□ 2.65
IPO4-215ENST00000560935 ZNF644Q9H582 1327 aaPredicted RBP31.58■■■□□ 2.65
IPO4-215ENST00000560935 ATP7AQ04656 1500 aa31.58■■■□□ 2.65
IPO4-215ENST00000560935 AGLP35573 1532 aa31.57■■■□□ 2.64
IPO4-215ENST00000560935 INO80Q9ULG1 1556 aaPredicted RBP31.56■■■□□ 2.64
IPO4-215ENST00000560935 MBD5Q9P267 1494 aa31.53■■■□□ 2.64
IPO4-215ENST00000560935 APLP2Q06481 763 aa31.53■■■□□ 2.64
IPO4-215ENST00000560935 CAMSAP2Q08AD1 1489 aa31.52■■■□□ 2.64
IPO4-215ENST00000560935 KANK4Q5T7N3 995 aaPredicted RBP31.52■■■□□ 2.64
IPO4-215ENST00000560935 PLPPR3Q6T4P5 718 aa31.5■■■□□ 2.63
IPO4-215ENST00000560935 CCDC141Q6ZP82 1450 aa31.46■■■□□ 2.63
IPO4-215ENST00000560935 ADGBQ8N7X0 1667 aa31.44■■■□□ 2.62
IPO4-215ENST00000560935 RTEL1-TNFRSF6BF6WH68 1400 aa31.43■■■□□ 2.62
IPO4-215ENST00000560935 RSPH4AQ5TD94 716 aa31.43■■■□□ 2.62
IPO4-215ENST00000560935 A2MP01023 1474 aa31.43■■■□□ 2.62
IPO4-215ENST00000560935 PLXNC1O60486 1568 aa31.43■■■□□ 2.62
IPO4-215ENST00000560935 ESF1Q9H501 851 aaKnown RBP31.41■■■□□ 2.62
IPO4-215ENST00000560935 MYOM3Q5VTT5 1437 aa31.41■■■□□ 2.62
IPO4-215ENST00000560935 ARHGEF5Q12774 1597 aa31.4■■■□□ 2.62
IPO4-215ENST00000560935 LMTK3Q96Q04 1460 aa31.4■■■□□ 2.62
IPO4-215ENST00000560935 MIA2Q96PC5 1412 aa31.38■■■□□ 2.61
IPO4-215ENST00000560935 CNTLNQ9NXG0 1405 aa31.34■■■□□ 2.61
IPO4-215ENST00000560935 CEBPAP49715 358 aaPredicted RBP31.33■■■□□ 2.61
IPO4-215ENST00000560935 C3P01024 1663 aa31.32■■■□□ 2.6
IPO4-215ENST00000560935 PREX1Q8TCU6 1659 aa31.3■■■□□ 2.6
IPO4-215ENST00000560935 TSPY4P0CV99 314 aa31.3■■■□□ 2.6
IPO4-215ENST00000560935 TSPY10P0CW01 314 aa31.3■■■□□ 2.6
IPO4-215ENST00000560935 MROH2AA6NES4 1674 aa31.28■■■□□ 2.6
IPO4-215ENST00000560935 DHX29Q7Z478 1369 aaKnown RBP31.28■■■□□ 2.6
IPO4-215ENST00000560935 GGT6Q6P531 493 aa31.24■■■□□ 2.59
IPO4-215ENST00000560935 MAST1Q9Y2H9 1570 aa31.24■■■□□ 2.59
IPO4-215ENST00000560935 SETD1BQ9UPS6 1966 aaKnown RBP31.23■■■□□ 2.59
IPO4-215ENST00000560935 PTPN23Q9H3S7 1636 aa31.22■■■□□ 2.59
IPO4-215ENST00000560935 CLTCQ00610 1675 aaKnown RBP31.22■■■□□ 2.59
IPO4-215ENST00000560935 HSPA2P54652 639 aa31.21■■■□□ 2.59
IPO4-215ENST00000560935 UHRF1BP1Q6BDS2 1440 aa31.2■■■□□ 2.59
IPO4-215ENST00000560935 PPP6R1Q9UPN7 881 aa31.19■■■□□ 2.58
IPO4-215ENST00000560935 FGD6Q6ZV73 1430 aa31.17■■■□□ 2.58
IPO4-215ENST00000560935 ZMYM3Q14202 1370 aa31.17■■■□□ 2.58
IPO4-215ENST00000560935 KIF3BO15066 747 aa31.15■■■□□ 2.58
IPO4-215ENST00000560935 TCOF1Q13428 1488 aaKnown RBP31.13■■■□□ 2.57
IPO4-215ENST00000560935 CROCC2H7BZ55 1655 aa31.13■■■□□ 2.57
IPO4-215ENST00000560935 NPATQ14207 1427 aa31.12■■■□□ 2.57
IPO4-215ENST00000560935 SHANK2Q9UPX8 1470 aa31.1■■■□□ 2.57
IPO4-215ENST00000560935 FAM135AQ9P2D6 1515 aa31.09■■■□□ 2.57
IPO4-215ENST00000560935 DNMT1P26358 1616 aaKnown RBP31.09■■■□□ 2.57
IPO4-215ENST00000560935 ABCC5O15440 1437 aa31.07■■■□□ 2.57
IPO4-215ENST00000560935 KDM5DQ9BY66 1539 aa31.06■■■□□ 2.56
IPO4-215ENST00000560935 DAPK1P53355 1430 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms