RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
MRPS11-209ENST00000560708 PTPRMP28827 1452 aa22.42■■□□□ 1.18
MRPS11-209ENST00000560708 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
MRPS11-209ENST00000560708 CASKIN1Q8WXD9 1431 aa22.42■■□□□ 1.18
MRPS11-209ENST00000560708 YEATS2Q9ULM3 1422 aa22.42■■□□□ 1.18
MRPS11-209ENST00000560708 MADDQ8WXG6 1647 aa22.42■■□□□ 1.18
MRPS11-209ENST00000560708 CCDC18Q5T9S5 1454 aa22.4■■□□□ 1.18
MRPS11-209ENST00000560708 ARHGAP5Q13017 1502 aa22.39■■□□□ 1.17
MRPS11-209ENST00000560708 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
MRPS11-209ENST00000560708 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
MRPS11-209ENST00000560708 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
MRPS11-209ENST00000560708 SIGLEC1Q9BZZ2 1709 aa22.37■■□□□ 1.17
MRPS11-209ENST00000560708 FYCO1Q9BQS8 1478 aa22.36■■□□□ 1.17
MRPS11-209ENST00000560708 RIMS1Q86UR5 1692 aaKnown RBP22.33■■□□□ 1.17
MRPS11-209ENST00000560708 PREX2Q70Z35 1606 aa22.31■■□□□ 1.16
MRPS11-209ENST00000560708 ZNF518AQ6AHZ1 1483 aa22.3■■□□□ 1.16
MRPS11-209ENST00000560708 CDC42BPBQ9Y5S2 1711 aa22.3■■□□□ 1.16
MRPS11-209ENST00000560708 KDM5CP41229 1560 aa22.28■■□□□ 1.16
MRPS11-209ENST00000560708 C9orf84Q5VXU9 1444 aa22.26■■□□□ 1.15
MRPS11-209ENST00000560708 MLECQ14165 292 aa22.26■■□□□ 1.15
MRPS11-209ENST00000560708 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
MRPS11-209ENST00000560708 ATP10AO60312 1499 aa22.25■■□□□ 1.15
MRPS11-209ENST00000560708 ABCC1P33527 1531 aa22.25■■□□□ 1.15
MRPS11-209ENST00000560708 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
MRPS11-209ENST00000560708 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
MRPS11-209ENST00000560708 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
MRPS11-209ENST00000560708 LMTK3Q96Q04 1460 aa22.21■■□□□ 1.15
MRPS11-209ENST00000560708 ARHGEF12Q9NZN5 1544 aa22.21■■□□□ 1.15
MRPS11-209ENST00000560708 DIP2CQ9Y2E4 1556 aa22.21■■□□□ 1.15
MRPS11-209ENST00000560708 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.15
MRPS11-209ENST00000560708 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
MRPS11-209ENST00000560708 TRAPPC8Q9Y2L5 1435 aa22.2■■□□□ 1.14
MRPS11-209ENST00000560708 ABCA6Q8N139 1617 aa22.18■■□□□ 1.14
MRPS11-209ENST00000560708 MLH3Q9UHC1 1453 aa22.16■■□□□ 1.14
MRPS11-209ENST00000560708 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
MRPS11-209ENST00000560708 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
MRPS11-209ENST00000560708 SAMD9LQ8IVG5 1584 aa22.15■■□□□ 1.14
MRPS11-209ENST00000560708 GPATCH8Q9UKJ3 1502 aaKnown RBP22.15■■□□□ 1.14
MRPS11-209ENST00000560708 ZNF777Q9ULD5 760 aaPredicted RBP22.14■■□□□ 1.13
MRPS11-209ENST00000560708 MTUS2Q5JR59 1369 aa22.13■■□□□ 1.13
MRPS11-209ENST00000560708 REREQ9P2R6 1566 aa22.13■■□□□ 1.13
MRPS11-209ENST00000560708 SYCP2Q9BX26 1530 aa22.13■■□□□ 1.13
MRPS11-209ENST00000560708 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
MRPS11-209ENST00000560708 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
MRPS11-209ENST00000560708 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.13
MRPS11-209ENST00000560708 HSPA2P54652 639 aa22.08■■□□□ 1.13
MRPS11-209ENST00000560708 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
MRPS11-209ENST00000560708 AGLP35573 1532 aa22.05■■□□□ 1.12
MRPS11-209ENST00000560708 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
MRPS11-209ENST00000560708 CEBPAP49715 358 aaPredicted RBP22.04■■□□□ 1.12
MRPS11-209ENST00000560708 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
MRPS11-209ENST00000560708 PLEKHH2Q8IVE3 1493 aa22.03■■□□□ 1.12
MRPS11-209ENST00000560708 KIAA1107Q9UPP5 1409 aa22.01■■□□□ 1.11
MRPS11-209ENST00000560708 SPAG9O60271 1321 aaKnown RBP22.01■■□□□ 1.11
MRPS11-209ENST00000560708 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
MRPS11-209ENST00000560708 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
MRPS11-209ENST00000560708 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
MRPS11-209ENST00000560708 C3P01024 1663 aa21.96■■□□□ 1.11
MRPS11-209ENST00000560708 LOC105371045A0A1W2PR82 267 aa21.96■■□□□ 1.11
MRPS11-209ENST00000560708 ZNF644Q9H582 1327 aaPredicted RBP21.96■■□□□ 1.11
MRPS11-209ENST00000560708 ESF1Q9H501 851 aaKnown RBP21.95■■□□□ 1.1
MRPS11-209ENST00000560708 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
MRPS11-209ENST00000560708 PLXNC1O60486 1568 aa21.93■■□□□ 1.1
MRPS11-209ENST00000560708 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
MRPS11-209ENST00000560708 UHRF1BP1Q6BDS2 1440 aa21.93■■□□□ 1.1
MRPS11-209ENST00000560708 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
MRPS11-209ENST00000560708 A2MP01023 1474 aa21.91■■□□□ 1.1
MRPS11-209ENST00000560708 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
MRPS11-209ENST00000560708 CNTLNQ9NXG0 1405 aa21.9■■□□□ 1.1
MRPS11-209ENST00000560708 CAMSAP2Q08AD1 1489 aa21.87■■□□□ 1.09
MRPS11-209ENST00000560708 MROH2AA6NES4 1674 aa21.86■■□□□ 1.09
MRPS11-209ENST00000560708 ADGBQ8N7X0 1667 aa21.86■■□□□ 1.09
MRPS11-209ENST00000560708 FBXO41Q8TF61 875 aa21.86■■□□□ 1.09
MRPS11-209ENST00000560708 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.09
MRPS11-209ENST00000560708 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.09
MRPS11-209ENST00000560708 CLTCQ00610 1675 aaKnown RBP21.83■■□□□ 1.09
MRPS11-209ENST00000560708 SETD1BQ9UPS6 1966 aaKnown RBP21.83■■□□□ 1.08
MRPS11-209ENST00000560708 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
MRPS11-209ENST00000560708 RTEL1-TNFRSF6BF6WH68 1400 aa21.81■■□□□ 1.08
MRPS11-209ENST00000560708 GGT6Q6P531 493 aa21.81■■□□□ 1.08
MRPS11-209ENST00000560708 ZMYM3Q14202 1370 aa21.8■■□□□ 1.08
MRPS11-209ENST00000560708 NPATQ14207 1427 aa21.79■■□□□ 1.08
MRPS11-209ENST00000560708 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
MRPS11-209ENST00000560708 DHX29Q7Z478 1369 aaKnown RBP21.75■■□□□ 1.07
MRPS11-209ENST00000560708 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
MRPS11-209ENST00000560708 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
MRPS11-209ENST00000560708 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
MRPS11-209ENST00000560708 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
MRPS11-209ENST00000560708 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
MRPS11-209ENST00000560708 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
MRPS11-209ENST00000560708 NCOA1Q15788 1441 aa21.72■■□□□ 1.07
MRPS11-209ENST00000560708 RSPH4AQ5TD94 716 aa21.71■■□□□ 1.07
MRPS11-209ENST00000560708 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
MRPS11-209ENST00000560708 KIF3BO15066 747 aa21.69■■□□□ 1.06
MRPS11-209ENST00000560708 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
MRPS11-209ENST00000560708 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
MRPS11-209ENST00000560708 ZNF142P52746 1687 aaPredicted RBP21.69■■□□□ 1.06
MRPS11-209ENST00000560708 PTPRTO14522 1441 aa21.68■■□□□ 1.06
MRPS11-209ENST00000560708 CEP170BQ9Y4F5 1589 aaPredicted RBP21.67■■□□□ 1.06
MRPS11-209ENST00000560708 KDM5DQ9BY66 1539 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms