RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
SPG21-211ENST00000560564 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
SPG21-211ENST00000560564 PREX2Q70Z35 1606 aa26.25■■□□□ 1.79
SPG21-211ENST00000560564 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
SPG21-211ENST00000560564 MAGI2Q86UL8 1455 aa26.24■■□□□ 1.79
SPG21-211ENST00000560564 ARHGAP5Q13017 1502 aa26.24■■□□□ 1.79
SPG21-211ENST00000560564 ZFYVE16Q7Z3T8 1539 aa26.24■■□□□ 1.79
SPG21-211ENST00000560564 YEATS2Q9ULM3 1422 aa26.23■■□□□ 1.79
SPG21-211ENST00000560564 SIGLEC1Q9BZZ2 1709 aa26.23■■□□□ 1.79
SPG21-211ENST00000560564 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
SPG21-211ENST00000560564 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
SPG21-211ENST00000560564 KDM5CP41229 1560 aa26.18■■□□□ 1.78
SPG21-211ENST00000560564 MADDQ8WXG6 1647 aa26.17■■□□□ 1.78
SPG21-211ENST00000560564 ZNF518AQ6AHZ1 1483 aa26.16■■□□□ 1.78
SPG21-211ENST00000560564 ABCC1P33527 1531 aa26.14■■□□□ 1.78
SPG21-211ENST00000560564 PTPRMP28827 1452 aa26.14■■□□□ 1.78
SPG21-211ENST00000560564 HECW2Q9P2P5 1572 aa26.13■■□□□ 1.77
SPG21-211ENST00000560564 ARHGEF12Q9NZN5 1544 aa26.12■■□□□ 1.77
SPG21-211ENST00000560564 ITSN2Q9NZM3 1697 aa26.12■■□□□ 1.77
SPG21-211ENST00000560564 ARID4BQ4LE39 1312 aaPredicted RBP26.11■■□□□ 1.77
SPG21-211ENST00000560564 GPATCH8Q9UKJ3 1502 aaKnown RBP26.09■■□□□ 1.77
SPG21-211ENST00000560564 ATP10AO60312 1499 aa26.08■■□□□ 1.77
SPG21-211ENST00000560564 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
SPG21-211ENST00000560564 TRAPPC8Q9Y2L5 1435 aa26.06■■□□□ 1.76
SPG21-211ENST00000560564 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
SPG21-211ENST00000560564 RIMS1Q86UR5 1692 aaKnown RBP26.06■■□□□ 1.76
SPG21-211ENST00000560564 C9orf84Q5VXU9 1444 aa26.05■■□□□ 1.76
SPG21-211ENST00000560564 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
SPG21-211ENST00000560564 MLH3Q9UHC1 1453 aa26.04■■□□□ 1.76
SPG21-211ENST00000560564 DIP2CQ9Y2E4 1556 aa26.04■■□□□ 1.76
SPG21-211ENST00000560564 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
SPG21-211ENST00000560564 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
SPG21-211ENST00000560564 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
SPG21-211ENST00000560564 REREQ9P2R6 1566 aa26.01■■□□□ 1.75
SPG21-211ENST00000560564 KIDINS220Q9ULH0 1771 aa26■■□□□ 1.75
SPG21-211ENST00000560564 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
SPG21-211ENST00000560564 TIAM1Q13009 1591 aa25.98■■□□□ 1.75
SPG21-211ENST00000560564 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
SPG21-211ENST00000560564 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.75
SPG21-211ENST00000560564 VPS8Q8N3P4 1428 aa25.95■■□□□ 1.74
SPG21-211ENST00000560564 KIAA1107Q9UPP5 1409 aa25.93■■□□□ 1.74
SPG21-211ENST00000560564 MLECQ14165 292 aa25.91■■□□□ 1.74
SPG21-211ENST00000560564 CFDP1Q9UEE9 299 aaPredicted RBP25.91■■□□□ 1.74
SPG21-211ENST00000560564 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
SPG21-211ENST00000560564 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
SPG21-211ENST00000560564 AGLP35573 1532 aa25.9■■□□□ 1.74
SPG21-211ENST00000560564 LMTK3Q96Q04 1460 aa25.88■■□□□ 1.73
SPG21-211ENST00000560564 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
SPG21-211ENST00000560564 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
SPG21-211ENST00000560564 NCOA2Q15596 1464 aa25.86■■□□□ 1.73
SPG21-211ENST00000560564 HNRNPMP52272 730 aaKnown RBP eCLIP25.86■■□□□ 1.73
SPG21-211ENST00000560564 MYT1LQ9UL68 1186 aa25.85■■□□□ 1.73
SPG21-211ENST00000560564 ATP7AQ04656 1500 aa25.83■■□□□ 1.73
SPG21-211ENST00000560564 MBD5Q9P267 1494 aa25.83■■□□□ 1.73
SPG21-211ENST00000560564 ZNF644Q9H582 1327 aaPredicted RBP25.82■■□□□ 1.72
SPG21-211ENST00000560564 LRRC9Q6ZRR7 1453 aa25.81■■□□□ 1.72
SPG21-211ENST00000560564 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
SPG21-211ENST00000560564 SPAG9O60271 1321 aaKnown RBP25.81■■□□□ 1.72
SPG21-211ENST00000560564 PLXNC1O60486 1568 aa25.79■■□□□ 1.72
SPG21-211ENST00000560564 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
SPG21-211ENST00000560564 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
SPG21-211ENST00000560564 C3P01024 1663 aa25.73■■□□□ 1.71
SPG21-211ENST00000560564 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
SPG21-211ENST00000560564 PREX1Q8TCU6 1659 aa25.72■■□□□ 1.71
SPG21-211ENST00000560564 ADGBQ8N7X0 1667 aa25.71■■□□□ 1.71
SPG21-211ENST00000560564 CEBPAP49715 358 aaPredicted RBP25.71■■□□□ 1.71
SPG21-211ENST00000560564 A2MP01023 1474 aa25.71■■□□□ 1.71
SPG21-211ENST00000560564 KANK4Q5T7N3 995 aaPredicted RBP25.7■■□□□ 1.7
SPG21-211ENST00000560564 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.7
SPG21-211ENST00000560564 CCDC141Q6ZP82 1450 aa25.68■■□□□ 1.7
SPG21-211ENST00000560564 ARHGEF5Q12774 1597 aa25.67■■□□□ 1.7
SPG21-211ENST00000560564 MROH2AA6NES4 1674 aa25.66■■□□□ 1.7
SPG21-211ENST00000560564 CNTLNQ9NXG0 1405 aa25.65■■□□□ 1.7
SPG21-211ENST00000560564 HSPA2P54652 639 aa25.65■■□□□ 1.7
SPG21-211ENST00000560564 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
SPG21-211ENST00000560564 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
SPG21-211ENST00000560564 CLTCQ00610 1675 aaKnown RBP25.58■■□□□ 1.69
SPG21-211ENST00000560564 MIA2Q96PC5 1412 aa25.58■■□□□ 1.69
SPG21-211ENST00000560564 DHX29Q7Z478 1369 aaKnown RBP25.57■■□□□ 1.68
SPG21-211ENST00000560564 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
SPG21-211ENST00000560564 ESF1Q9H501 851 aaKnown RBP25.56■■□□□ 1.68
SPG21-211ENST00000560564 MAST1Q9Y2H9 1570 aa25.55■■□□□ 1.68
SPG21-211ENST00000560564 ZMYM3Q14202 1370 aa25.53■■□□□ 1.68
SPG21-211ENST00000560564 STRCQ7RTU9 1775 aa25.52■■□□□ 1.68
SPG21-211ENST00000560564 NPATQ14207 1427 aa25.52■■□□□ 1.68
SPG21-211ENST00000560564 ILDR1Q86SU0 546 aaPredicted RBP25.51■■□□□ 1.67
SPG21-211ENST00000560564 GGT6Q6P531 493 aa25.5■■□□□ 1.67
SPG21-211ENST00000560564 PPP6R1Q9UPN7 881 aa25.49■■□□□ 1.67
SPG21-211ENST00000560564 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
SPG21-211ENST00000560564 PTPN23Q9H3S7 1636 aa25.45■■□□□ 1.67
SPG21-211ENST00000560564 TSPY4P0CV99 314 aa25.45■■□□□ 1.66
SPG21-211ENST00000560564 TSPY10P0CW01 314 aa25.45■■□□□ 1.66
SPG21-211ENST00000560564 APLP2Q06481 763 aa25.45■■□□□ 1.66
SPG21-211ENST00000560564 FAM135AQ9P2D6 1515 aa25.45■■□□□ 1.66
SPG21-211ENST00000560564 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
SPG21-211ENST00000560564 MYO3AQ8NEV4 1616 aa25.42■■□□□ 1.66
SPG21-211ENST00000560564 KIF3BO15066 747 aa25.42■■□□□ 1.66
SPG21-211ENST00000560564 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
SPG21-211ENST00000560564 RNF17Q9BXT8 1623 aaKnown RBP25.41■■□□□ 1.66
SPG21-211ENST00000560564 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms