RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	FBXO22	Q8NEZ5	403 aa		11.5	□□□□□ -0.57
BLM-209	ENST00000560559	POTEB3	A0JP26	581 aa		11.48	□□□□□ -0.57
BLM-209	ENST00000560559	POTEB	Q6S5H4	581 aa		11.48	□□□□□ -0.57
BLM-209	ENST00000560559	SPNS2	Q8IVW8	549 aa		11.48	□□□□□ -0.57
BLM-209	ENST00000560559	MFRP	Q9BY79	579 aa		11.48	□□□□□ -0.57
BLM-209	ENST00000560559	ERBB3	P21860	1342 aa		11.48	□□□□□ -0.57
BLM-209	ENST00000560559	MMRN1	Q13201	1228 aa		11.44	□□□□□ -0.58
BLM-209	ENST00000560559	ZSWIM6	Q9HCJ5	1215 aa		11.44	□□□□□ -0.58
BLM-209	ENST00000560559	KRTAP3-3	Q9BYR6	98 aa		11.41	□□□□□ -0.58
BLM-209	ENST00000560559	KRTAP3-2	Q9BYR7	98 aa		11.41	□□□□□ -0.58
BLM-209	ENST00000560559	VARS2	Q5ST30	1063 aa	Known RBP	11.39	□□□□□ -0.59
BLM-209	ENST00000560559	GPR153	Q6NV75	609 aa		11.37	□□□□□ -0.59
BLM-209	ENST00000560559	ARSI	Q5FYB1	569 aa		11.35	□□□□□ -0.59
BLM-209	ENST00000560559	C2orf72	A6NCS6	295 aa		11.33	□□□□□ -0.6
BLM-209	ENST00000560559	TMC2	Q8TDI7	906 aa		11.33	□□□□□ -0.6
BLM-209	ENST00000560559	KIF3C	O14782	793 aa		11.3	□□□□□ -0.6
BLM-209	ENST00000560559	PPP1R37	O75864	691 aa		11.28	□□□□□ -0.6
BLM-209	ENST00000560559	HS6ST3	Q8IZP7	471 aa		11.28	□□□□□ -0.6
BLM-209	ENST00000560559	ZNF687	Q8N1G0	1237 aa		11.28	□□□□□ -0.6
BLM-209	ENST00000560559	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
BLM-209	ENST00000560559	CHGA	P10645	457 aa	Known RBP	11.27	□□□□□ -0.61
BLM-209	ENST00000560559	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.25	□□□□□ -0.61
BLM-209	ENST00000560559	NUDT7	P0C024	238 aa		11.22	□□□□□ -0.61
BLM-209	ENST00000560559	SLC34A2	O95436	690 aa		11.2	□□□□□ -0.62
BLM-209	ENST00000560559	PCDHGA4	Q9Y5G9	962 aa		11.2	□□□□□ -0.62
BLM-209	ENST00000560559	ANKRD13D	Q6ZTN6	518 aa		11.17	□□□□□ -0.62
BLM-209	ENST00000560559	RNF166	Q96A37	237 aa	Predicted RBP	11.16	□□□□□ -0.62
BLM-209	ENST00000560559	RYDEN	Q9NUL5	291 aa	Known RBP	11.15	□□□□□ -0.62
BLM-209	ENST00000560559	MYT1L	Q9UL68	1186 aa		11.15	□□□□□ -0.62
BLM-209	ENST00000560559	LHX6	Q9UPM6	363 aa		11.15	□□□□□ -0.62
BLM-209	ENST00000560559	GPHN	Q9NQX3	736 aa	Predicted RBP	11.13	□□□□□ -0.63
BLM-209	ENST00000560559	FOXK1	P85037	733 aa		11.12	□□□□□ -0.63
BLM-209	ENST00000560559	PLPP6	Q8IY26	295 aa		11.12	□□□□□ -0.63
BLM-209	ENST00000560559	PTGER2	P43116	358 aa		11.11	□□□□□ -0.63
BLM-209	ENST00000560559	PBX2	P40425	430 aa		11.1	□□□□□ -0.63
BLM-209	ENST00000560559	LSM11	P83369	360 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
BLM-209	ENST00000560559	NKX1-1	Q15270	411 aa	Predicted RBP	11.09	□□□□□ -0.63
BLM-209	ENST00000560559	DNAJC5	Q9H3Z4	198 aa		11.09	□□□□□ -0.63
BLM-209	ENST00000560559	TBC1D12	O60347	775 aa		11.08	□□□□□ -0.64
BLM-209	ENST00000560559	DSG2	Q14126	1118 aa		11.08	□□□□□ -0.64
BLM-209	ENST00000560559	PTCD2	Q8WV60	388 aa	Known RBP	11.08	□□□□□ -0.64
BLM-209	ENST00000560559	PSD	A5PKW4	1024 aa	Predicted RBP	11.07	□□□□□ -0.64
BLM-209	ENST00000560559	DCAF8L2	P0C7V8	631 aa		11.07	□□□□□ -0.64
BLM-209	ENST00000560559	AXIN2	Q9Y2T1	843 aa		11.06	□□□□□ -0.64
BLM-209	ENST00000560559	ARHGAP33	O14559	1287 aa		11.01	□□□□□ -0.65
BLM-209	ENST00000560559	POTEE	Q6S8J3	1075 aa		11.01	□□□□□ -0.65
BLM-209	ENST00000560559	KDM4F	A0A1W2PPD8	638 aa		10.99	□□□□□ -0.65
BLM-209	ENST00000560559	PPP4R3B	Q5MIZ7	849 aa		10.99	□□□□□ -0.65
BLM-209	ENST00000560559	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
BLM-209	ENST00000560559	PDE4A	P27815	886 aa		10.97	□□□□□ -0.65
BLM-209	ENST00000560559	PPP1R15B	Q5SWA1	713 aa		10.97	□□□□□ -0.65
BLM-209	ENST00000560559	CRISPLD2	Q9H0B8	497 aa		10.97	□□□□□ -0.65
BLM-209	ENST00000560559	GTPBP6	O43824	516 aa	Predicted RBP	10.95	□□□□□ -0.66
BLM-209	ENST00000560559	KCNH8	Q96L42	1107 aa		10.95	□□□□□ -0.66
BLM-209	ENST00000560559	ADGRD1	Q6QNK2	874 aa		10.94	□□□□□ -0.66
BLM-209	ENST00000560559	PSEN2	P49810	448 aa		10.93	□□□□□ -0.66
BLM-209	ENST00000560559	OXER1	Q8TDS5	423 aa		10.93	□□□□□ -0.66
BLM-209	ENST00000560559	NCKAP5L	Q9HCH0	1330 aa		10.91	□□□□□ -0.66
BLM-209	ENST00000560559	LARP6	Q9BRS8	491 aa	Known RBP	10.91	□□□□□ -0.66
BLM-209	ENST00000560559	DMRTA1	Q5VZB9	504 aa		10.9	□□□□□ -0.66
BLM-209	ENST00000560559	STAC3	Q96MF2	364 aa		10.9	□□□□□ -0.66
BLM-209	ENST00000560559	TK2	O00142	265 aa		10.89	□□□□□ -0.67
BLM-209	ENST00000560559	ZNF454	Q8N9F8	522 aa		10.89	□□□□□ -0.67
BLM-209	ENST00000560559	KCNK17	Q96T54	332 aa		10.89	□□□□□ -0.67
BLM-209	ENST00000560559	DDX27	Q96GQ7	796 aa	Known RBP	10.88	□□□□□ -0.67
BLM-209	ENST00000560559	HCST	Q9UBK5	93 aa		10.85	□□□□□ -0.67
BLM-209	ENST00000560559	MAP3K9	P80192	1104 aa		10.83	□□□□□ -0.68
BLM-209	ENST00000560559	HR	O43593	1189 aa		10.82	□□□□□ -0.68
BLM-209	ENST00000560559	EVI5	O60447	810 aa		10.82	□□□□□ -0.68
BLM-209	ENST00000560559	FOSB	P53539	338 aa		10.8	□□□□□ -0.68
BLM-209	ENST00000560559	BCL2L12	Q9HB09	334 aa		10.8	□□□□□ -0.68
BLM-209	ENST00000560559	PTPRE	P23469	700 aa		10.79	□□□□□ -0.68
BLM-209	ENST00000560559	MFSD10	Q14728	455 aa		10.79	□□□□□ -0.68
BLM-209	ENST00000560559	KCTD12	Q96CX2	325 aa	Known RBP	10.79	□□□□□ -0.68
BLM-209	ENST00000560559	JPH4	Q96JJ6	628 aa		10.78	□□□□□ -0.68
BLM-209	ENST00000560559	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.78	□□□□□ -0.68
BLM-209	ENST00000560559	VPS9D1	Q9Y2B5	631 aa		10.78	□□□□□ -0.68
BLM-209	ENST00000560559	ZDHHC16	Q969W1	377 aa		10.76	□□□□□ -0.69
BLM-209	ENST00000560559	PLA2G2E	Q9NZK7	142 aa		10.76	□□□□□ -0.69
BLM-209	ENST00000560559	CADPS2	Q86UW7	1296 aa		10.75	□□□□□ -0.69
BLM-209	ENST00000560559	SLC4A5	Q9BY07	1137 aa		10.73	□□□□□ -0.69
BLM-209	ENST00000560559	EMILIN3	Q9NT22	766 aa		10.73	□□□□□ -0.69
BLM-209	ENST00000560559	ADAM33	Q9BZ11	813 aa		10.72	□□□□□ -0.69
BLM-209	ENST00000560559	GOLGA8CP	A6NN73	597 aa		10.71	□□□□□ -0.69
BLM-209	ENST00000560559	BBX	Q8WY36	941 aa	Predicted RBP	10.7	□□□□□ -0.7
BLM-209	ENST00000560559	PTPN5	P54829	565 aa		10.69	□□□□□ -0.7
BLM-209	ENST00000560559	ZBED2	Q9BTP6	218 aa		10.69	□□□□□ -0.7
BLM-209	ENST00000560559	MRPL50	Q8N5N7	158 aa	Known RBP	10.68	□□□□□ -0.7
BLM-209	ENST00000560559	NBPF3	Q9H094	633 aa		10.66	□□□□□ -0.7
BLM-209	ENST00000560559	PCDHGA10	Q9Y5H3	936 aa		10.66	□□□□□ -0.7
BLM-209	ENST00000560559	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.65	□□□□□ -0.7
BLM-209	ENST00000560559	TYW1B	Q6NUM6	668 aa		10.65	□□□□□ -0.7
BLM-209	ENST00000560559	WNT2B	Q93097	391 aa		10.64	□□□□□ -0.71
BLM-209	ENST00000560559	FBXW7	Q969H0	707 aa		10.64	□□□□□ -0.71
BLM-209	ENST00000560559	PPP1R3G	B7ZBB8	358 aa		10.63	□□□□□ -0.71
BLM-209	ENST00000560559	DPYSL4	O14531	572 aa		10.63	□□□□□ -0.71
BLM-209	ENST00000560559	PHF14	O94880	888 aa		10.63	□□□□□ -0.71
BLM-209	ENST00000560559	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.63	□□□□□ -0.71
BLM-209	ENST00000560559	CAMK2B	Q13554	666 aa		10.62	□□□□□ -0.71
BLM-209	ENST00000560559	SPRYD3	Q8NCJ5	442 aa		10.62	□□□□□ -0.71

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