RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
IDH3A-219ENST00000560414 LRRIQ1Q96JM4 1722 aa23.77■■□□□ 1.4
IDH3A-219ENST00000560414 PCF11O94913 1555 aaKnown RBP23.77■■□□□ 1.4
IDH3A-219ENST00000560414 FANCAO15360 1455 aa23.74■■□□□ 1.39
IDH3A-219ENST00000560414 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
IDH3A-219ENST00000560414 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
IDH3A-219ENST00000560414 ADGRL1O94910 1474 aa23.73■■□□□ 1.39
IDH3A-219ENST00000560414 KIF14Q15058 1648 aa23.7■■□□□ 1.39
IDH3A-219ENST00000560414 FOXD4L1Q9NU39 408 aa23.7■■□□□ 1.38
IDH3A-219ENST00000560414 PLCH2O75038 1416 aa23.69■■□□□ 1.38
IDH3A-219ENST00000560414 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
IDH3A-219ENST00000560414 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
IDH3A-219ENST00000560414 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
IDH3A-219ENST00000560414 FYCO1Q9BQS8 1478 aa23.68■■□□□ 1.38
IDH3A-219ENST00000560414 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
IDH3A-219ENST00000560414 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
IDH3A-219ENST00000560414 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
IDH3A-219ENST00000560414 EFCAB2Q5VUJ9 269 aa23.63■■□□□ 1.37
IDH3A-219ENST00000560414 SLC4A2P04920 1241 aa23.62■■□□□ 1.37
IDH3A-219ENST00000560414 MYO5CQ9NQX4 1742 aa23.61■■□□□ 1.37
IDH3A-219ENST00000560414 SCAPERQ9BY12 1400 aa23.6■■□□□ 1.37
IDH3A-219ENST00000560414 RICTORQ6R327 1708 aa23.6■■□□□ 1.37
IDH3A-219ENST00000560414 ARHGAP5Q13017 1502 aa23.57■■□□□ 1.36
IDH3A-219ENST00000560414 POGZQ7Z3K3 1410 aa23.53■■□□□ 1.36
IDH3A-219ENST00000560414 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
IDH3A-219ENST00000560414 YEATS2Q9ULM3 1422 aa23.51■■□□□ 1.35
IDH3A-219ENST00000560414 ZMYM4Q5VZL5 1548 aa23.51■■□□□ 1.35
IDH3A-219ENST00000560414 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
IDH3A-219ENST00000560414 ARHGEF40Q8TER5 1519 aa23.5■■□□□ 1.35
IDH3A-219ENST00000560414 POTEDQ86YR6 584 aa23.49■■□□□ 1.35
IDH3A-219ENST00000560414 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
IDH3A-219ENST00000560414 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
IDH3A-219ENST00000560414 MTUS2Q5JR59 1369 aa23.47■■□□□ 1.35
IDH3A-219ENST00000560414 PREX2Q70Z35 1606 aa23.47■■□□□ 1.35
IDH3A-219ENST00000560414 MAGI2Q86UL8 1455 aa23.46■■□□□ 1.35
IDH3A-219ENST00000560414 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
IDH3A-219ENST00000560414 CDC42BPAQ5VT25 1732 aa23.44■■□□□ 1.34
IDH3A-219ENST00000560414 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
IDH3A-219ENST00000560414 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
IDH3A-219ENST00000560414 ARHGEF12Q9NZN5 1544 aa23.42■■□□□ 1.34
IDH3A-219ENST00000560414 ADAMTSL3P82987 1691 aa23.41■■□□□ 1.34
IDH3A-219ENST00000560414 BCORL1Q5H9F3 1711 aa23.41■■□□□ 1.34
IDH3A-219ENST00000560414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.4■■□□□ 1.34
IDH3A-219ENST00000560414 MYT1LQ9UL68 1186 aa23.4■■□□□ 1.34
IDH3A-219ENST00000560414 TRAPPC8Q9Y2L5 1435 aa23.4■■□□□ 1.34
IDH3A-219ENST00000560414 ABCC1P33527 1531 aa23.39■■□□□ 1.34
IDH3A-219ENST00000560414 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.33
IDH3A-219ENST00000560414 CCNB3Q8WWL7 1395 aa23.39■■□□□ 1.33
IDH3A-219ENST00000560414 ATP10AO60312 1499 aa23.37■■□□□ 1.33
IDH3A-219ENST00000560414 KDM5CP41229 1560 aa23.37■■□□□ 1.33
IDH3A-219ENST00000560414 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
IDH3A-219ENST00000560414 MLECQ14165 292 aa23.37■■□□□ 1.33
IDH3A-219ENST00000560414 CFDP1Q9UEE9 299 aaPredicted RBP23.37■■□□□ 1.33
IDH3A-219ENST00000560414 PTPRMP28827 1452 aa23.36■■□□□ 1.33
IDH3A-219ENST00000560414 EHBP1L1Q8N3D4 1523 aa23.35■■□□□ 1.33
IDH3A-219ENST00000560414 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
IDH3A-219ENST00000560414 HNRNPMP52272 730 aaKnown RBP eCLIP23.34■■□□□ 1.33
IDH3A-219ENST00000560414 SAMD9LQ8IVG5 1584 aa23.34■■□□□ 1.33
IDH3A-219ENST00000560414 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
IDH3A-219ENST00000560414 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.33
IDH3A-219ENST00000560414 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
IDH3A-219ENST00000560414 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
IDH3A-219ENST00000560414 SYCP2Q9BX26 1530 aa23.3■■□□□ 1.32
IDH3A-219ENST00000560414 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
IDH3A-219ENST00000560414 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
IDH3A-219ENST00000560414 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
IDH3A-219ENST00000560414 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.32
IDH3A-219ENST00000560414 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
IDH3A-219ENST00000560414 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
IDH3A-219ENST00000560414 KIAA1107Q9UPP5 1409 aa23.25■■□□□ 1.31
IDH3A-219ENST00000560414 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
IDH3A-219ENST00000560414 SPAG9O60271 1321 aaKnown RBP23.24■■□□□ 1.31
IDH3A-219ENST00000560414 KIDINS220Q9ULH0 1771 aa23.23■■□□□ 1.31
IDH3A-219ENST00000560414 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
IDH3A-219ENST00000560414 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
IDH3A-219ENST00000560414 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
IDH3A-219ENST00000560414 MYCNP04198 464 aaPredicted RBP23.22■■□□□ 1.31
IDH3A-219ENST00000560414 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
IDH3A-219ENST00000560414 FER1L4A9Z1Z3 1794 aa23.18■■□□□ 1.3
IDH3A-219ENST00000560414 MBD5Q9P267 1494 aa23.17■■□□□ 1.3
IDH3A-219ENST00000560414 MAP3K1Q13233 1512 aa23.16■■□□□ 1.3
IDH3A-219ENST00000560414 ATP7AQ04656 1500 aa23.14■■□□□ 1.3
IDH3A-219ENST00000560414 AGLP35573 1532 aa23.13■■□□□ 1.29
IDH3A-219ENST00000560414 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
IDH3A-219ENST00000560414 CAMSAP2Q08AD1 1489 aa23.11■■□□□ 1.29
IDH3A-219ENST00000560414 INO80Q9ULG1 1556 aaPredicted RBP23.11■■□□□ 1.29
IDH3A-219ENST00000560414 APLP2Q06481 763 aa23.11■■□□□ 1.29
IDH3A-219ENST00000560414 LMTK3Q96Q04 1460 aa23.08■■□□□ 1.29
IDH3A-219ENST00000560414 A2MP01023 1474 aa23.07■■□□□ 1.28
IDH3A-219ENST00000560414 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
IDH3A-219ENST00000560414 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
IDH3A-219ENST00000560414 HSPA2P54652 639 aa23.04■■□□□ 1.28
IDH3A-219ENST00000560414 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
IDH3A-219ENST00000560414 RTEL1-TNFRSF6BF6WH68 1400 aa23.04■■□□□ 1.28
IDH3A-219ENST00000560414 PLXNC1O60486 1568 aa23.02■■□□□ 1.28
IDH3A-219ENST00000560414 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
IDH3A-219ENST00000560414 GGT6Q6P531 493 aa23.01■■□□□ 1.27
IDH3A-219ENST00000560414 U3KPZ7 1027 aaPredicted RBP23.01■■□□□ 1.27
IDH3A-219ENST00000560414 TSPY4P0CV99 314 aa22.99■■□□□ 1.27
IDH3A-219ENST00000560414 TSPY10P0CW01 314 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms