RNA–Protein interactions for RNA: ENST00000560306.1

LINC00933-204, long intergenic non-protein coding RNA 933, humanhuman

TSL 2

Gene LINC00933, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00933-204ENST00000560306 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
LINC00933-204ENST00000560306 HOXB1P14653 301 aaPredicted RBP17.19■□□□□ 0.34
LINC00933-204ENST00000560306 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
LINC00933-204ENST00000560306 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
LINC00933-204ENST00000560306 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
LINC00933-204ENST00000560306 SPNS2Q8IVW8 549 aa17.07■□□□□ 0.32
LINC00933-204ENST00000560306 ERBB3P21860 1342 aa17.06■□□□□ 0.32
LINC00933-204ENST00000560306 KRTAP3-3Q9BYR6 98 aa17.04■□□□□ 0.32
LINC00933-204ENST00000560306 KRTAP3-2Q9BYR7 98 aa17.04■□□□□ 0.32
LINC00933-204ENST00000560306 GPR153Q6NV75 609 aa17.01■□□□□ 0.31
LINC00933-204ENST00000560306 HS6ST3Q8IZP7 471 aa17.01■□□□□ 0.31
LINC00933-204ENST00000560306 MMRN1Q13201 1228 aa17■□□□□ 0.31
LINC00933-204ENST00000560306 C2orf72A6NCS6 295 aa16.99■□□□□ 0.31
LINC00933-204ENST00000560306 KIF3CO14782 793 aa16.99■□□□□ 0.31
LINC00933-204ENST00000560306 VARS2Q5ST30 1063 aaKnown RBP16.96■□□□□ 0.31
LINC00933-204ENST00000560306 PPP1R37O75864 691 aa16.95■□□□□ 0.3
LINC00933-204ENST00000560306 ARSIQ5FYB1 569 aa16.93■□□□□ 0.3
LINC00933-204ENST00000560306 TMC2Q8TDI7 906 aa16.92■□□□□ 0.3
LINC00933-204ENST00000560306 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
LINC00933-204ENST00000560306 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00933-204ENST00000560306 ZNF687Q8N1G0 1237 aa16.84■□□□□ 0.29
LINC00933-204ENST00000560306 SLC34A2O95436 690 aa16.81■□□□□ 0.28
LINC00933-204ENST00000560306 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
LINC00933-204ENST00000560306 DNAJC5Q9H3Z4 198 aa16.8■□□□□ 0.28
LINC00933-204ENST00000560306 NUDT7P0C024 238 aa16.76■□□□□ 0.27
LINC00933-204ENST00000560306 PCDHGA4Q9Y5G9 962 aa16.76■□□□□ 0.27
LINC00933-204ENST00000560306 NKX1-1Q15270 411 aaPredicted RBP16.74■□□□□ 0.27
LINC00933-204ENST00000560306 RYDENQ9NUL5 291 aaKnown RBP16.73■□□□□ 0.27
LINC00933-204ENST00000560306 FOXK1P85037 733 aa16.69■□□□□ 0.26
LINC00933-204ENST00000560306 GPHNQ9NQX3 736 aaPredicted RBP16.68■□□□□ 0.26
LINC00933-204ENST00000560306 PLPP6Q8IY26 295 aa16.66■□□□□ 0.26
LINC00933-204ENST00000560306 LHX6Q9UPM6 363 aa16.66■□□□□ 0.26
LINC00933-204ENST00000560306 DSG2Q14126 1118 aa16.62■□□□□ 0.25
LINC00933-204ENST00000560306 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
LINC00933-204ENST00000560306 RNF166Q96A37 237 aaPredicted RBP16.59■□□□□ 0.25
LINC00933-204ENST00000560306 PBX2P40425 430 aa16.58■□□□□ 0.24
LINC00933-204ENST00000560306 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
LINC00933-204ENST00000560306 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
LINC00933-204ENST00000560306 PTGER2P43116 358 aa16.57■□□□□ 0.24
LINC00933-204ENST00000560306 LSM11P83369 360 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00933-204ENST00000560306 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
LINC00933-204ENST00000560306 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
LINC00933-204ENST00000560306 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
LINC00933-204ENST00000560306 TBC1D12O60347 775 aa16.52■□□□□ 0.24
LINC00933-204ENST00000560306 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
LINC00933-204ENST00000560306 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
LINC00933-204ENST00000560306 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
LINC00933-204ENST00000560306 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
LINC00933-204ENST00000560306 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
LINC00933-204ENST00000560306 PDE4AP27815 886 aa16.43■□□□□ 0.22
LINC00933-204ENST00000560306 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
LINC00933-204ENST00000560306 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
LINC00933-204ENST00000560306 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
LINC00933-204ENST00000560306 UPF1Q92900 1129 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC00933-204ENST00000560306 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
LINC00933-204ENST00000560306 ADGRD1Q6QNK2 874 aa16.33■□□□□ 0.2
LINC00933-204ENST00000560306 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
LINC00933-204ENST00000560306 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
LINC00933-204ENST00000560306 PSEN2P49810 448 aa16.31■□□□□ 0.2
LINC00933-204ENST00000560306 DMRTA1Q5VZB9 504 aa16.29■□□□□ 0.2
LINC00933-204ENST00000560306 TK2O00142 265 aa16.28■□□□□ 0.2
LINC00933-204ENST00000560306 MFSD10Q14728 455 aa16.27■□□□□ 0.2
LINC00933-204ENST00000560306 KCNH8Q96L42 1107 aa16.27■□□□□ 0.2
LINC00933-204ENST00000560306 ZNF454Q8N9F8 522 aa16.25■□□□□ 0.19
LINC00933-204ENST00000560306 KCNK17Q96T54 332 aa16.24■□□□□ 0.19
LINC00933-204ENST00000560306 EVI5O60447 810 aa16.21■□□□□ 0.19
LINC00933-204ENST00000560306 HRO43593 1189 aa16.2■□□□□ 0.18
LINC00933-204ENST00000560306 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
LINC00933-204ENST00000560306 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
LINC00933-204ENST00000560306 FOSBP53539 338 aa16.19■□□□□ 0.18
LINC00933-204ENST00000560306 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
LINC00933-204ENST00000560306 MAP3K9P80192 1104 aa16.18■□□□□ 0.18
LINC00933-204ENST00000560306 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
LINC00933-204ENST00000560306 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
LINC00933-204ENST00000560306 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
LINC00933-204ENST00000560306 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
LINC00933-204ENST00000560306 HCSTQ9UBK5 93 aa16.12■□□□□ 0.17
LINC00933-204ENST00000560306 PTPREP23469 700 aa16.11■□□□□ 0.17
LINC00933-204ENST00000560306 VPS9D1Q9Y2B5 631 aa16.11■□□□□ 0.17
LINC00933-204ENST00000560306 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
LINC00933-204ENST00000560306 ZDHHC16Q969W1 377 aa16.09■□□□□ 0.17
LINC00933-204ENST00000560306 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
LINC00933-204ENST00000560306 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
LINC00933-204ENST00000560306 KCTD12Q96CX2 325 aaKnown RBP16.04■□□□□ 0.16
LINC00933-204ENST00000560306 CAMK2BQ13554 666 aa16.02■□□□□ 0.16
LINC00933-204ENST00000560306 ZBED2Q9BTP6 218 aa16.02■□□□□ 0.16
LINC00933-204ENST00000560306 PCDHGA10Q9Y5H3 936 aa15.99■□□□□ 0.15
LINC00933-204ENST00000560306 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
LINC00933-204ENST00000560306 PLA2G2EQ9NZK7 142 aa15.97■□□□□ 0.15
LINC00933-204ENST00000560306 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
LINC00933-204ENST00000560306 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
LINC00933-204ENST00000560306 PHF14O94880 888 aa15.95■□□□□ 0.14
LINC00933-204ENST00000560306 RTN4Q9NQC3 1192 aaKnown RBP15.95■□□□□ 0.14
LINC00933-204ENST00000560306 DPYSL4O14531 572 aa15.94■□□□□ 0.14
LINC00933-204ENST00000560306 TYW1BQ6NUM6 668 aa15.94■□□□□ 0.14
LINC00933-204ENST00000560306 FBXW7Q969H0 707 aa15.94■□□□□ 0.14
LINC00933-204ENST00000560306 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
LINC00933-204ENST00000560306 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
LINC00933-204ENST00000560306 NBPF3Q9H094 633 aa15.9■□□□□ 0.14
LINC00933-204ENST00000560306 GOLGA8CPA6NN73 597 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms