RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 ADAMTSL3P82987 1691 aa37.48■■■■□ 3.59
CRNDE-209ENST00000560208 ARHGAP5Q13017 1502 aa37.46■■■■□ 3.59
CRNDE-209ENST00000560208 POGZQ7Z3K3 1410 aa37.46■■■■□ 3.59
CRNDE-209ENST00000560208 MAGI2Q86UL8 1455 aa37.45■■■■□ 3.59
CRNDE-209ENST00000560208 BCORL1Q5H9F3 1711 aa37.44■■■■□ 3.58
CRNDE-209ENST00000560208 ZFYVE16Q7Z3T8 1539 aa37.44■■■■□ 3.58
CRNDE-209ENST00000560208 YEATS2Q9ULM3 1422 aa37.43■■■■□ 3.58
CRNDE-209ENST00000560208 CDC42BPBQ9Y5S2 1711 aa37.41■■■■□ 3.58
CRNDE-209ENST00000560208 PREX2Q70Z35 1606 aa37.36■■■■□ 3.57
CRNDE-209ENST00000560208 HECW2Q9P2P5 1572 aa37.35■■■■□ 3.57
CRNDE-209ENST00000560208 PTPRMP28827 1452 aa37.34■■■■□ 3.57
CRNDE-209ENST00000560208 MADDQ8WXG6 1647 aa37.33■■■■□ 3.57
CRNDE-209ENST00000560208 CEP162Q5TB80 1403 aa37.32■■■■□ 3.56
CRNDE-209ENST00000560208 ZNF518AQ6AHZ1 1483 aa37.32■■■■□ 3.56
CRNDE-209ENST00000560208 CDC42BPAQ5VT25 1732 aa37.3■■■■□ 3.56
CRNDE-209ENST00000560208 SIGLEC1Q9BZZ2 1709 aa37.3■■■■□ 3.56
CRNDE-209ENST00000560208 AFAP1Q8N556 730 aa37.28■■■■□ 3.56
CRNDE-209ENST00000560208 ATP10AO60312 1499 aa37.26■■■■□ 3.55
CRNDE-209ENST00000560208 KDM5CP41229 1560 aa37.25■■■■□ 3.55
CRNDE-209ENST00000560208 RIMS1Q86UR5 1692 aaKnown RBP37.21■■■■□ 3.55
CRNDE-209ENST00000560208 ABCC1P33527 1531 aa37.2■■■■□ 3.55
CRNDE-209ENST00000560208 C9orf84Q5VXU9 1444 aa37.19■■■■□ 3.54
CRNDE-209ENST00000560208 MYT1LQ9UL68 1186 aa37.19■■■■□ 3.54
CRNDE-209ENST00000560208 ARHGEF12Q9NZN5 1544 aa37.19■■■■□ 3.54
CRNDE-209ENST00000560208 LOC105371045A0A1W2PR82 267 aa37.18■■■■□ 3.54
CRNDE-209ENST00000560208 ITSN2Q9NZM3 1697 aa37.18■■■■□ 3.54
CRNDE-209ENST00000560208 MTUS2Q5JR59 1369 aa37.17■■■■□ 3.54
CRNDE-209ENST00000560208 MLECQ14165 292 aa37.17■■■■□ 3.54
CRNDE-209ENST00000560208 GPATCH8Q9UKJ3 1502 aaKnown RBP37.16■■■■□ 3.54
CRNDE-209ENST00000560208 TRAPPC8Q9Y2L5 1435 aa37.16■■■■□ 3.54
CRNDE-209ENST00000560208 ZNF777Q9ULD5 760 aaPredicted RBP37.14■■■■□ 3.54
CRNDE-209ENST00000560208 MLH3Q9UHC1 1453 aa37.12■■■■□ 3.53
CRNDE-209ENST00000560208 FER1L4A9Z1Z3 1794 aa37.09■■■■□ 3.53
CRNDE-209ENST00000560208 SAMD9LQ8IVG5 1584 aa37.08■■■■□ 3.53
CRNDE-209ENST00000560208 DIP2CQ9Y2E4 1556 aa37.08■■■■□ 3.53
CRNDE-209ENST00000560208 CCNB3Q8WWL7 1395 aa37.08■■■■□ 3.53
CRNDE-209ENST00000560208 CFDP1Q9UEE9 299 aaPredicted RBP37.05■■■■□ 3.52
CRNDE-209ENST00000560208 ABCA6Q8N139 1617 aa37.05■■■■□ 3.52
CRNDE-209ENST00000560208 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
CRNDE-209ENST00000560208 PLPPR3Q6T4P5 718 aa37.03■■■■□ 3.52
CRNDE-209ENST00000560208 KIDINS220Q9ULH0 1771 aa37.01■■■■□ 3.52
CRNDE-209ENST00000560208 SYCP2Q9BX26 1530 aa37.01■■■■□ 3.52
CRNDE-209ENST00000560208 REREQ9P2R6 1566 aa37.01■■■■□ 3.52
CRNDE-209ENST00000560208 HNRNPMP52272 730 aaKnown RBP eCLIP37■■■■□ 3.51
CRNDE-209ENST00000560208 PLEKHH2Q8IVE3 1493 aa36.97■■■■□ 3.51
CRNDE-209ENST00000560208 KIAA1107Q9UPP5 1409 aa36.96■■■■□ 3.51
CRNDE-209ENST00000560208 TIAM1Q13009 1591 aa36.95■■■■□ 3.51
CRNDE-209ENST00000560208 LMTK3Q96Q04 1460 aa36.93■■■■□ 3.5
CRNDE-209ENST00000560208 SPAG9O60271 1321 aaKnown RBP36.92■■■■□ 3.5
CRNDE-209ENST00000560208 VPS8Q8N3P4 1428 aa36.91■■■■□ 3.5
CRNDE-209ENST00000560208 AGLP35573 1532 aa36.9■■■■□ 3.5
CRNDE-209ENST00000560208 SUPT6HQ7KZ85 1726 aaKnown RBP36.86■■■■□ 3.49
CRNDE-209ENST00000560208 ZNF644Q9H582 1327 aaPredicted RBP36.85■■■■□ 3.49
CRNDE-209ENST00000560208 NCOA2Q15596 1464 aa36.83■■■■□ 3.49
CRNDE-209ENST00000560208 ATP7AQ04656 1500 aa36.82■■■■□ 3.48
CRNDE-209ENST00000560208 CEBPAP49715 358 aaPredicted RBP36.82■■■■□ 3.48
CRNDE-209ENST00000560208 INO80Q9ULG1 1556 aaPredicted RBP36.79■■■■□ 3.48
CRNDE-209ENST00000560208 HSPA2P54652 639 aa36.77■■■■□ 3.48
CRNDE-209ENST00000560208 ESF1Q9H501 851 aaKnown RBP36.76■■■■□ 3.48
CRNDE-209ENST00000560208 MBD5Q9P267 1494 aa36.75■■■■□ 3.47
CRNDE-209ENST00000560208 LRRC9Q6ZRR7 1453 aa36.74■■■■□ 3.47
CRNDE-209ENST00000560208 SETD1BQ9UPS6 1966 aaKnown RBP36.72■■■■□ 3.47
CRNDE-209ENST00000560208 PREX1Q8TCU6 1659 aa36.7■■■■□ 3.47
CRNDE-209ENST00000560208 A2MP01023 1474 aa36.69■■■■□ 3.46
CRNDE-209ENST00000560208 C3P01024 1663 aa36.69■■■■□ 3.46
CRNDE-209ENST00000560208 MAP3K1Q13233 1512 aa36.68■■■■□ 3.46
CRNDE-209ENST00000560208 ILDR1Q86SU0 546 aaPredicted RBP36.67■■■■□ 3.46
CRNDE-209ENST00000560208 PLXNC1O60486 1568 aa36.66■■■■□ 3.46
CRNDE-209ENST00000560208 CAMSAP2Q08AD1 1489 aa36.66■■■■□ 3.46
CRNDE-209ENST00000560208 ADGBQ8N7X0 1667 aa36.65■■■■□ 3.46
CRNDE-209ENST00000560208 CNTLNQ9NXG0 1405 aa36.65■■■■□ 3.46
CRNDE-209ENST00000560208 KANK4Q5T7N3 995 aaPredicted RBP36.64■■■■□ 3.46
CRNDE-209ENST00000560208 RTEL1-TNFRSF6BF6WH68 1400 aa36.63■■■■□ 3.45
CRNDE-209ENST00000560208 RSPH4AQ5TD94 716 aa36.6■■■■□ 3.45
CRNDE-209ENST00000560208 CCDC141Q6ZP82 1450 aa36.6■■■■□ 3.45
CRNDE-209ENST00000560208 UHRF1BP1Q6BDS2 1440 aa36.58■■■■□ 3.45
CRNDE-209ENST00000560208 MROH2AA6NES4 1674 aa36.56■■■■□ 3.44
CRNDE-209ENST00000560208 GGT6Q6P531 493 aa36.54■■■■□ 3.44
CRNDE-209ENST00000560208 ARHGEF5Q12774 1597 aa36.53■■■■□ 3.44
CRNDE-209ENST00000560208 CLTCQ00610 1675 aaKnown RBP36.51■■■■□ 3.43
CRNDE-209ENST00000560208 ZMYM3Q14202 1370 aa36.51■■■■□ 3.43
CRNDE-209ENST00000560208 DHX29Q7Z478 1369 aaKnown RBP36.51■■■■□ 3.43
CRNDE-209ENST00000560208 APLP2Q06481 763 aa36.5■■■■□ 3.43
CRNDE-209ENST00000560208 TSPY4P0CV99 314 aa36.47■■■■□ 3.43
CRNDE-209ENST00000560208 TSPY10P0CW01 314 aa36.47■■■■□ 3.43
CRNDE-209ENST00000560208 PPP6R1Q9UPN7 881 aa36.46■■■■□ 3.43
CRNDE-209ENST00000560208 MYOM3Q5VTT5 1437 aa36.45■■■■□ 3.43
CRNDE-209ENST00000560208 MIA2Q96PC5 1412 aa36.43■■■■□ 3.42
CRNDE-209ENST00000560208 NPATQ14207 1427 aa36.42■■■■□ 3.42
CRNDE-209ENST00000560208 KIF3BO15066 747 aa36.4■■■■□ 3.42
CRNDE-209ENST00000560208 STRCQ7RTU9 1775 aa36.4■■■■□ 3.42
CRNDE-209ENST00000560208 MAST1Q9Y2H9 1570 aa36.33■■■■□ 3.41
CRNDE-209ENST00000560208 DMRT2Q9Y5R5 561 aa36.33■■■■□ 3.41
CRNDE-209ENST00000560208 PTPRKQ15262 1439 aa36.32■■■■□ 3.4
CRNDE-209ENST00000560208 FBXO41Q8TF61 875 aa36.31■■■■□ 3.4
CRNDE-209ENST00000560208 PTPN23Q9H3S7 1636 aa36.24■■■■□ 3.39
CRNDE-209ENST00000560208 KDM5DQ9BY66 1539 aa36.23■■■■□ 3.39
CRNDE-209ENST00000560208 FAM135AQ9P2D6 1515 aa36.23■■■■□ 3.39
CRNDE-209ENST00000560208 MYO3AQ8NEV4 1616 aa36.23■■■■□ 3.39
CRNDE-209ENST00000560208 WASHC2CQ9Y4E1 1318 aa36.22■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms