RNA–Protein interactions for RNA: ENST00000560191.1

TCF12-216, Transcript of transcription factor 12, humanhuman

TSL 2

Gene TCF12, Length 1,205 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-216ENST00000560191 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
TCF12-216ENST00000560191 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
TCF12-216ENST00000560191 RYDENQ9NUL5 291 aaKnown RBP12.39□□□□□ -0.43
TCF12-216ENST00000560191 PPP1R37O75864 691 aa12.33□□□□□ -0.44
TCF12-216ENST00000560191 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
TCF12-216ENST00000560191 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
TCF12-216ENST00000560191 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
TCF12-216ENST00000560191 G3V3G9 751 aa12.28□□□□□ -0.44
TCF12-216ENST00000560191 EMP3P54852 163 aa12.23□□□□□ -0.45
TCF12-216ENST00000560191 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
TCF12-216ENST00000560191 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
TCF12-216ENST00000560191 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
TCF12-216ENST00000560191 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
TCF12-216ENST00000560191 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
TCF12-216ENST00000560191 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
TCF12-216ENST00000560191 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
TCF12-216ENST00000560191 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
TCF12-216ENST00000560191 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
TCF12-216ENST00000560191 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
TCF12-216ENST00000560191 TMEM92Q6UXU6 159 aa12.12□□□□□ -0.47
TCF12-216ENST00000560191 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
TCF12-216ENST00000560191 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
TCF12-216ENST00000560191 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
TCF12-216ENST00000560191 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
TCF12-216ENST00000560191 KRTAP3-2Q9BYR7 98 aa12.1□□□□□ -0.47
TCF12-216ENST00000560191 ZNF710Q8N1W2 664 aa12.09□□□□□ -0.47
TCF12-216ENST00000560191 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
TCF12-216ENST00000560191 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
TCF12-216ENST00000560191 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
TCF12-216ENST00000560191 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
TCF12-216ENST00000560191 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
TCF12-216ENST00000560191 PDE4AP27815 886 aa12.01□□□□□ -0.49
TCF12-216ENST00000560191 KIF3CO14782 793 aa12□□□□□ -0.49
TCF12-216ENST00000560191 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
TCF12-216ENST00000560191 ERBB3P21860 1342 aa11.99□□□□□ -0.49
TCF12-216ENST00000560191 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
TCF12-216ENST00000560191 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
TCF12-216ENST00000560191 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
TCF12-216ENST00000560191 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
TCF12-216ENST00000560191 FOXK1P85037 733 aa11.94□□□□□ -0.5
TCF12-216ENST00000560191 DSG2Q14126 1118 aa11.94□□□□□ -0.5
TCF12-216ENST00000560191 MFSD10Q14728 455 aa11.94□□□□□ -0.5
TCF12-216ENST00000560191 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
TCF12-216ENST00000560191 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
TCF12-216ENST00000560191 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
TCF12-216ENST00000560191 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
TCF12-216ENST00000560191 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
TCF12-216ENST00000560191 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
TCF12-216ENST00000560191 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
TCF12-216ENST00000560191 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
TCF12-216ENST00000560191 ZNF687Q8N1G0 1237 aa11.85□□□□□ -0.51
TCF12-216ENST00000560191 KHSRPQ92945 711 aaKnown RBP eCLIP11.84□□□□□ -0.51
TCF12-216ENST00000560191 E2F4Q16254 413 aa11.81□□□□□ -0.52
TCF12-216ENST00000560191 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
TCF12-216ENST00000560191 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
TCF12-216ENST00000560191 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
TCF12-216ENST00000560191 SLC34A2O95436 690 aa11.77□□□□□ -0.53
TCF12-216ENST00000560191 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
TCF12-216ENST00000560191 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
TCF12-216ENST00000560191 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
TCF12-216ENST00000560191 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
TCF12-216ENST00000560191 NUDT7P0C024 238 aa11.73□□□□□ -0.53
TCF12-216ENST00000560191 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
TCF12-216ENST00000560191 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
TCF12-216ENST00000560191 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
TCF12-216ENST00000560191 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
TCF12-216ENST00000560191 DPYSL4O14531 572 aa11.7□□□□□ -0.54
TCF12-216ENST00000560191 TBC1D12O60347 775 aa11.68□□□□□ -0.54
TCF12-216ENST00000560191 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
TCF12-216ENST00000560191 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
TCF12-216ENST00000560191 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
TCF12-216ENST00000560191 PTGER2P43116 358 aa11.66□□□□□ -0.54
TCF12-216ENST00000560191 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
TCF12-216ENST00000560191 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
TCF12-216ENST00000560191 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
TCF12-216ENST00000560191 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
TCF12-216ENST00000560191 EVI5O60447 810 aa11.62□□□□□ -0.55
TCF12-216ENST00000560191 PBX2P40425 430 aa11.62□□□□□ -0.55
TCF12-216ENST00000560191 PDIA6Q15084 440 aa11.61□□□□□ -0.55
TCF12-216ENST00000560191 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
TCF12-216ENST00000560191 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
TCF12-216ENST00000560191 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
TCF12-216ENST00000560191 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
TCF12-216ENST00000560191 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
TCF12-216ENST00000560191 SEMA3EO15041 775 aa11.51□□□□□ -0.57
TCF12-216ENST00000560191 ARHGAP33O14559 1287 aa11.5□□□□□ -0.57
TCF12-216ENST00000560191 NBR1Q14596 966 aa11.5□□□□□ -0.57
TCF12-216ENST00000560191 DDX12PQ92771 950 aa11.5□□□□□ -0.57
TCF12-216ENST00000560191 MLLT3P42568 568 aaPredicted RBP11.47□□□□□ -0.57
TCF12-216ENST00000560191 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
TCF12-216ENST00000560191 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
TCF12-216ENST00000560191 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
TCF12-216ENST00000560191 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
TCF12-216ENST00000560191 FOSBP53539 338 aa11.46□□□□□ -0.57
TCF12-216ENST00000560191 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
TCF12-216ENST00000560191 PHF14O94880 888 aa11.44□□□□□ -0.58
TCF12-216ENST00000560191 PSEN2P49810 448 aa11.44□□□□□ -0.58
TCF12-216ENST00000560191 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
TCF12-216ENST00000560191 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
TCF12-216ENST00000560191 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms