RNA–Protein interactions for RNA: ENST00000560179.1

ETFA-212, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-212ENST00000560179 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
ETFA-212ENST00000560179 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
ETFA-212ENST00000560179 MFSD10Q14728 455 aa17.42■□□□□ 0.38
ETFA-212ENST00000560179 DDX27Q96GQ7 796 aaKnown RBP17.4■□□□□ 0.38
ETFA-212ENST00000560179 TMC2Q8TDI7 906 aa17.38■□□□□ 0.37
ETFA-212ENST00000560179 KIF3CO14782 793 aa17.34■□□□□ 0.37
ETFA-212ENST00000560179 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
ETFA-212ENST00000560179 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
ETFA-212ENST00000560179 C2orf72A6NCS6 295 aa17.33■□□□□ 0.36
ETFA-212ENST00000560179 POTEB2H3BUK9 544 aa17.33■□□□□ 0.36
ETFA-212ENST00000560179 E2F4Q16254 413 aa17.32■□□□□ 0.36
ETFA-212ENST00000560179 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
ETFA-212ENST00000560179 DSG2Q14126 1118 aa17.31■□□□□ 0.36
ETFA-212ENST00000560179 PPP1R15BQ5SWA1 713 aa17.31■□□□□ 0.36
ETFA-212ENST00000560179 BCANQ96GW7 911 aa17.31■□□□□ 0.36
ETFA-212ENST00000560179 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
ETFA-212ENST00000560179 FOXK1P85037 733 aa17.3■□□□□ 0.36
ETFA-212ENST00000560179 KCNV2Q8TDN2 545 aa17.3■□□□□ 0.36
ETFA-212ENST00000560179 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.36
ETFA-212ENST00000560179 CAMK2BQ13554 666 aa17.24■□□□□ 0.35
ETFA-212ENST00000560179 PLPP6Q8IY26 295 aa17.23■□□□□ 0.35
ETFA-212ENST00000560179 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
ETFA-212ENST00000560179 NBR1Q14596 966 aa17.17■□□□□ 0.34
ETFA-212ENST00000560179 MAMSTRQ6ZN01 415 aa17.15■□□□□ 0.34
ETFA-212ENST00000560179 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
ETFA-212ENST00000560179 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
ETFA-212ENST00000560179 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
ETFA-212ENST00000560179 SLAIN1Q8ND83 568 aa17.06■□□□□ 0.32
ETFA-212ENST00000560179 DPYSL4O14531 572 aa17.02■□□□□ 0.32
ETFA-212ENST00000560179 LHX8Q68G74 356 aa17.01■□□□□ 0.31
ETFA-212ENST00000560179 OXER1Q8TDS5 423 aa17■□□□□ 0.31
ETFA-212ENST00000560179 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.31
ETFA-212ENST00000560179 SLC34A2O95436 690 aa16.98■□□□□ 0.31
ETFA-212ENST00000560179 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
ETFA-212ENST00000560179 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
ETFA-212ENST00000560179 SEMA3EO15041 775 aa16.96■□□□□ 0.31
ETFA-212ENST00000560179 PTCD2Q8WV60 388 aaKnown RBP16.96■□□□□ 0.31
ETFA-212ENST00000560179 SPDYE16A6NNV3 312 aaPredicted RBP16.93■□□□□ 0.3
ETFA-212ENST00000560179 PDIA6Q15084 440 aa16.92■□□□□ 0.3
ETFA-212ENST00000560179 TBC1D12O60347 775 aa16.91■□□□□ 0.3
ETFA-212ENST00000560179 TESPA1A2RU30 521 aaPredicted RBP16.9■□□□□ 0.3
ETFA-212ENST00000560179 HOXB3P14651 431 aaPredicted RBP16.89■□□□□ 0.29
ETFA-212ENST00000560179 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
ETFA-212ENST00000560179 PCDHGA4Q9Y5G9 962 aa16.86■□□□□ 0.29
ETFA-212ENST00000560179 EVI5O60447 810 aa16.84■□□□□ 0.29
ETFA-212ENST00000560179 MLLT3P42568 568 aaPredicted RBP16.81■□□□□ 0.28
ETFA-212ENST00000560179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.8■□□□□ 0.28
ETFA-212ENST00000560179 SNPHO15079 494 aa16.79■□□□□ 0.28
ETFA-212ENST00000560179 SMYD5Q6GMV2 418 aa16.79■□□□□ 0.28
ETFA-212ENST00000560179 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
ETFA-212ENST00000560179 RIMBP2O15034 1052 aa16.78■□□□□ 0.28
ETFA-212ENST00000560179 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
ETFA-212ENST00000560179 ZSWIM6Q9HCJ5 1215 aa16.77■□□□□ 0.28
ETFA-212ENST00000560179 PTGER2P43116 358 aa16.76■□□□□ 0.27
ETFA-212ENST00000560179 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
ETFA-212ENST00000560179 ARSIQ5FYB1 569 aa16.75■□□□□ 0.27
ETFA-212ENST00000560179 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
ETFA-212ENST00000560179 GPR153Q6NV75 609 aa16.74■□□□□ 0.27
ETFA-212ENST00000560179 KDM4FA0A1W2PPD8 638 aa16.73■□□□□ 0.27
ETFA-212ENST00000560179 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
ETFA-212ENST00000560179 KHSRPQ92945 711 aaKnown RBP eCLIP16.73■□□□□ 0.27
ETFA-212ENST00000560179 GRXCR2A6NFK2 248 aa16.7■□□□□ 0.26
ETFA-212ENST00000560179 DDX12PQ92771 950 aa16.7■□□□□ 0.26
ETFA-212ENST00000560179 NUDT7P0C024 238 aa16.68■□□□□ 0.26
ETFA-212ENST00000560179 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
ETFA-212ENST00000560179 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
ETFA-212ENST00000560179 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
ETFA-212ENST00000560179 OSBPP22059 807 aa16.63■□□□□ 0.25
ETFA-212ENST00000560179 HOXB1P14653 301 aaPredicted RBP16.62■□□□□ 0.25
ETFA-212ENST00000560179 PHF14O94880 888 aa16.59■□□□□ 0.25
ETFA-212ENST00000560179 PCDHGA10Q9Y5H3 936 aa16.58■□□□□ 0.24
ETFA-212ENST00000560179 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
ETFA-212ENST00000560179 EPAS1Q99814 870 aa16.56■□□□□ 0.24
ETFA-212ENST00000560179 LHX6Q9UPM6 363 aa16.56■□□□□ 0.24
ETFA-212ENST00000560179 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
ETFA-212ENST00000560179 FOSBP53539 338 aa16.55■□□□□ 0.24
ETFA-212ENST00000560179 ST18O60284 1047 aa16.52■□□□□ 0.24
ETFA-212ENST00000560179 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.24
ETFA-212ENST00000560179 ZNF454Q8N9F8 522 aa16.52■□□□□ 0.24
ETFA-212ENST00000560179 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.24
ETFA-212ENST00000560179 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
ETFA-212ENST00000560179 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
ETFA-212ENST00000560179 FBXW7Q969H0 707 aa16.48■□□□□ 0.23
ETFA-212ENST00000560179 NUTM2FA1L443 756 aa16.47■□□□□ 0.23
ETFA-212ENST00000560179 ZDHHC16Q969W1 377 aa16.47■□□□□ 0.23
ETFA-212ENST00000560179 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
ETFA-212ENST00000560179 FAM163AQ96GL9 167 aaPredicted RBP16.47■□□□□ 0.23
ETFA-212ENST00000560179 PSDA5PKW4 1024 aaPredicted RBP16.45■□□□□ 0.22
ETFA-212ENST00000560179 MAP3K7O43318 606 aa16.43■□□□□ 0.22
ETFA-212ENST00000560179 PPP4R3BQ5MIZ7 849 aa16.42■□□□□ 0.22
ETFA-212ENST00000560179 ZMYND10O75800 440 aa16.41■□□□□ 0.22
ETFA-212ENST00000560179 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
ETFA-212ENST00000560179 GPR37O15354 613 aa16.4■□□□□ 0.22
ETFA-212ENST00000560179 TSR1Q2NL82 804 aaKnown RBP16.39■□□□□ 0.21
ETFA-212ENST00000560179 MARVELD3Q96A59 401 aa16.38■□□□□ 0.21
ETFA-212ENST00000560179 CDHR5Q9HBB8 845 aa16.38■□□□□ 0.21
ETFA-212ENST00000560179 C6orf132Q5T0Z8 1188 aa16.37■□□□□ 0.21
ETFA-212ENST00000560179 ERBB3P21860 1342 aa16.37■□□□□ 0.21
ETFA-212ENST00000560179 FCHSD2O94868 740 aa16.36■□□□□ 0.21
ETFA-212ENST00000560179 EMP3P54852 163 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms