RNA–Protein interactions for RNA: ENST00000560133.5

LINS1-207, Transcript of lines homolog 1, humanhuman

TSL 2 BASIC

Gene LINS1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-207ENST00000560133 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
LINS1-207ENST00000560133 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
LINS1-207ENST00000560133 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
LINS1-207ENST00000560133 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
LINS1-207ENST00000560133 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
LINS1-207ENST00000560133 GTPBP6O43824 516 aaPredicted RBP11.47□□□□□ -0.57
LINS1-207ENST00000560133 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
LINS1-207ENST00000560133 G3V3G9 751 aa11.45□□□□□ -0.58
LINS1-207ENST00000560133 SOX12O15370 315 aa11.45□□□□□ -0.58
LINS1-207ENST00000560133 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
LINS1-207ENST00000560133 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
LINS1-207ENST00000560133 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
LINS1-207ENST00000560133 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
LINS1-207ENST00000560133 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
LINS1-207ENST00000560133 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
LINS1-207ENST00000560133 CCDC180Q9P1Z9 1646 aa11.42□□□□□ -0.58
LINS1-207ENST00000560133 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
LINS1-207ENST00000560133 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
LINS1-207ENST00000560133 ABCC9O60706 1549 aa11.41□□□□□ -0.58
LINS1-207ENST00000560133 NLRP6P59044 892 aa11.39□□□□□ -0.59
LINS1-207ENST00000560133 MS4A4AQ96JQ5 239 aa11.39□□□□□ -0.59
LINS1-207ENST00000560133 ERBB3P21860 1342 aa11.38□□□□□ -0.59
LINS1-207ENST00000560133 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
LINS1-207ENST00000560133 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
LINS1-207ENST00000560133 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
LINS1-207ENST00000560133 PPP1R37O75864 691 aa11.35□□□□□ -0.59
LINS1-207ENST00000560133 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
LINS1-207ENST00000560133 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
LINS1-207ENST00000560133 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
LINS1-207ENST00000560133 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
LINS1-207ENST00000560133 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
LINS1-207ENST00000560133 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
LINS1-207ENST00000560133 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
LINS1-207ENST00000560133 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
LINS1-207ENST00000560133 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
LINS1-207ENST00000560133 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
LINS1-207ENST00000560133 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
LINS1-207ENST00000560133 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
LINS1-207ENST00000560133 PTGER2P43116 358 aa11.16□□□□□ -0.62
LINS1-207ENST00000560133 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
LINS1-207ENST00000560133 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
LINS1-207ENST00000560133 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
LINS1-207ENST00000560133 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
LINS1-207ENST00000560133 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
LINS1-207ENST00000560133 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
LINS1-207ENST00000560133 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
LINS1-207ENST00000560133 PDE4AP27815 886 aa11.03□□□□□ -0.64
LINS1-207ENST00000560133 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINS1-207ENST00000560133 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
LINS1-207ENST00000560133 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
LINS1-207ENST00000560133 KIF3CO14782 793 aa11.01□□□□□ -0.65
LINS1-207ENST00000560133 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINS1-207ENST00000560133 C2orf72A6NCS6 295 aa11□□□□□ -0.65
LINS1-207ENST00000560133 MFSD10Q14728 455 aa10.99□□□□□ -0.65
LINS1-207ENST00000560133 TMC2Q8TDI7 906 aa10.98□□□□□ -0.65
LINS1-207ENST00000560133 DSG2Q14126 1118 aa10.96□□□□□ -0.65
LINS1-207ENST00000560133 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
LINS1-207ENST00000560133 WDR70Q9NW82 654 aa10.95□□□□□ -0.66
LINS1-207ENST00000560133 FOXK1P85037 733 aa10.94□□□□□ -0.66
LINS1-207ENST00000560133 PBX2P40425 430 aa10.93□□□□□ -0.66
LINS1-207ENST00000560133 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
LINS1-207ENST00000560133 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
LINS1-207ENST00000560133 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.66
LINS1-207ENST00000560133 NUDT7P0C024 238 aa10.9□□□□□ -0.66
LINS1-207ENST00000560133 PLPP6Q8IY26 295 aa10.9□□□□□ -0.66
LINS1-207ENST00000560133 E2F4Q16254 413 aa10.88□□□□□ -0.67
LINS1-207ENST00000560133 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
LINS1-207ENST00000560133 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
LINS1-207ENST00000560133 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
LINS1-207ENST00000560133 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
LINS1-207ENST00000560133 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
LINS1-207ENST00000560133 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
LINS1-207ENST00000560133 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
LINS1-207ENST00000560133 NACADO15069 1562 aa10.82□□□□□ -0.68
LINS1-207ENST00000560133 PCDHGA4Q9Y5G9 962 aa10.82□□□□□ -0.68
LINS1-207ENST00000560133 SLC34A2O95436 690 aa10.8□□□□□ -0.68
LINS1-207ENST00000560133 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
LINS1-207ENST00000560133 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
LINS1-207ENST00000560133 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
LINS1-207ENST00000560133 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
LINS1-207ENST00000560133 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
LINS1-207ENST00000560133 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
LINS1-207ENST00000560133 PTCD2Q8WV60 388 aaKnown RBP10.75□□□□□ -0.69
LINS1-207ENST00000560133 UPF1Q92900 1129 aaKnown RBP eCLIP10.75□□□□□ -0.69
LINS1-207ENST00000560133 DPYSL4O14531 572 aa10.74□□□□□ -0.69
LINS1-207ENST00000560133 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
LINS1-207ENST00000560133 TK2O00142 265 aa10.7□□□□□ -0.7
LINS1-207ENST00000560133 HRO43593 1189 aa10.7□□□□□ -0.7
LINS1-207ENST00000560133 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
LINS1-207ENST00000560133 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
LINS1-207ENST00000560133 TBC1D12O60347 775 aa10.67□□□□□ -0.7
LINS1-207ENST00000560133 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
LINS1-207ENST00000560133 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
LINS1-207ENST00000560133 PSEN2P49810 448 aa10.66□□□□□ -0.7
LINS1-207ENST00000560133 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
LINS1-207ENST00000560133 BCANQ96GW7 911 aa10.66□□□□□ -0.7
LINS1-207ENST00000560133 SEMA3EO15041 775 aa10.65□□□□□ -0.7
LINS1-207ENST00000560133 PDIA6Q15084 440 aa10.65□□□□□ -0.7
LINS1-207ENST00000560133 EVI5O60447 810 aa10.64□□□□□ -0.71
LINS1-207ENST00000560133 NBR1Q14596 966 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms