RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TIAM1Q13009 1591 aa26.02■■□□□ 1.76
SEMA4B-215ENST00000560089 CHD1O14646 1710 aa26.01■■□□□ 1.75
SEMA4B-215ENST00000560089 DISP1Q96F81 1524 aa26.01■■□□□ 1.75
SEMA4B-215ENST00000560089 UGGT2Q9NYU1 1516 aa26■■□□□ 1.75
SEMA4B-215ENST00000560089 LAS1LQ9Y4W2 734 aaKnown RBP25.99■■□□□ 1.75
SEMA4B-215ENST00000560089 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
SEMA4B-215ENST00000560089 VSIG10Q8N0Z9 540 aa25.97■■□□□ 1.75
SEMA4B-215ENST00000560089 KIAA0556O60303 1618 aa25.94■■□□□ 1.74
SEMA4B-215ENST00000560089 LRRC9Q6ZRR7 1453 aa25.94■■□□□ 1.74
SEMA4B-215ENST00000560089 HIRIP3Q9BW71 556 aaPredicted RBP25.92■■□□□ 1.74
SEMA4B-215ENST00000560089 LRRIQ1Q96JM4 1722 aa25.91■■□□□ 1.74
SEMA4B-215ENST00000560089 GSE1Q14687 1217 aa25.87■■□□□ 1.73
SEMA4B-215ENST00000560089 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
SEMA4B-215ENST00000560089 PPM1GO15355 546 aaPredicted RBP25.85■■□□□ 1.73
SEMA4B-215ENST00000560089 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
SEMA4B-215ENST00000560089 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
SEMA4B-215ENST00000560089 CDK13Q14004 1512 aaKnown RBP25.84■■□□□ 1.73
SEMA4B-215ENST00000560089 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
SEMA4B-215ENST00000560089 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
SEMA4B-215ENST00000560089 PLB1Q6P1J6 1458 aa25.82■■□□□ 1.72
SEMA4B-215ENST00000560089 CARMIL2Q6F5E8 1435 aa25.82■■□□□ 1.72
SEMA4B-215ENST00000560089 FAM43AQ8N2R8 423 aa25.8■■□□□ 1.72
SEMA4B-215ENST00000560089 NPM2Q86SE8 214 aaKnown RBP25.8■■□□□ 1.72
SEMA4B-215ENST00000560089 MAPKBP1O60336 1514 aa25.79■■□□□ 1.72
SEMA4B-215ENST00000560089 FAM50AQ14320 339 aaKnown RBP25.77■■□□□ 1.72
SEMA4B-215ENST00000560089 EPRSP07814 1512 aaKnown RBP25.76■■□□□ 1.72
SEMA4B-215ENST00000560089 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
SEMA4B-215ENST00000560089 HECW1Q76N89 1606 aa25.75■■□□□ 1.71
SEMA4B-215ENST00000560089 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
SEMA4B-215ENST00000560089 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
SEMA4B-215ENST00000560089 NUP153P49790 1475 aaKnown RBP25.72■■□□□ 1.71
SEMA4B-215ENST00000560089 SIN3AQ96ST3 1273 aa25.72■■□□□ 1.71
SEMA4B-215ENST00000560089 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
SEMA4B-215ENST00000560089 RAPGEF6Q8TEU7 1601 aa25.7■■□□□ 1.7
SEMA4B-215ENST00000560089 FRAT1Q92837 279 aaPredicted RBP25.69■■□□□ 1.7
SEMA4B-215ENST00000560089 CCDC18Q5T9S5 1454 aa25.67■■□□□ 1.7
SEMA4B-215ENST00000560089 PTPRGP23470 1445 aa25.66■■□□□ 1.7
SEMA4B-215ENST00000560089 RAB3GAP2Q9H2M9 1393 aa25.65■■□□□ 1.7
SEMA4B-215ENST00000560089 NCOA2Q15596 1464 aa25.64■■□□□ 1.7
SEMA4B-215ENST00000560089 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
SEMA4B-215ENST00000560089 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
SEMA4B-215ENST00000560089 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
SEMA4B-215ENST00000560089 HSP90AA2PQ14568 343 aaPredicted RBP25.57■■□□□ 1.68
SEMA4B-215ENST00000560089 NFKBIBQ15653 356 aa25.56■■□□□ 1.68
SEMA4B-215ENST00000560089 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
SEMA4B-215ENST00000560089 ZBED9Q6R2W3 1325 aa25.55■■□□□ 1.68
SEMA4B-215ENST00000560089 FGD6Q6ZV73 1430 aa25.54■■□□□ 1.68
SEMA4B-215ENST00000560089 ABCA8O94911 1581 aa25.52■■□□□ 1.68
SEMA4B-215ENST00000560089 OSCARQ8IYS5 282 aa25.51■■□□□ 1.67
SEMA4B-215ENST00000560089 RRP9O43818 475 aaKnown RBP25.5■■□□□ 1.67
SEMA4B-215ENST00000560089 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
SEMA4B-215ENST00000560089 DCAF11Q8TEB1 546 aa25.5■■□□□ 1.67
SEMA4B-215ENST00000560089 ATP10BO94823 1461 aa25.5■■□□□ 1.67
SEMA4B-215ENST00000560089 FAM9BQ8IZU0 186 aa25.49■■□□□ 1.67
SEMA4B-215ENST00000560089 PDE4AP27815 886 aa25.45■■□□□ 1.67
SEMA4B-215ENST00000560089 PLEKHD1A6NEE1 506 aa25.45■■□□□ 1.66
SEMA4B-215ENST00000560089 CCDC184Q52MB2 194 aa25.45■■□□□ 1.66
SEMA4B-215ENST00000560089 UACAQ9BZF9 1416 aa25.45■■□□□ 1.66
SEMA4B-215ENST00000560089 AKNAQ7Z591 1439 aa25.44■■□□□ 1.66
SEMA4B-215ENST00000560089 A0A0U1RQG5 324 aaPredicted RBP25.44■■□□□ 1.66
SEMA4B-215ENST00000560089 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
SEMA4B-215ENST00000560089 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
SEMA4B-215ENST00000560089 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
SEMA4B-215ENST00000560089 TCERG1O14776 1098 aaKnown RBP25.42■■□□□ 1.66
SEMA4B-215ENST00000560089 DDRGK1Q96HY6 314 aa25.42■■□□□ 1.66
SEMA4B-215ENST00000560089 RRAGDQ9NQL2 400 aaPredicted RBP25.42■■□□□ 1.66
SEMA4B-215ENST00000560089 TROQ12816 1431 aaPredicted RBP25.42■■□□□ 1.66
SEMA4B-215ENST00000560089 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
SEMA4B-215ENST00000560089 KIF14Q15058 1648 aa25.41■■□□□ 1.66
SEMA4B-215ENST00000560089 NAP1L5Q96NT1 182 aaPredicted RBP25.41■■□□□ 1.66
SEMA4B-215ENST00000560089 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
SEMA4B-215ENST00000560089 SETD5Q9C0A6 1442 aa25.4■■□□□ 1.66
SEMA4B-215ENST00000560089 BACH2Q9BYV9 841 aa25.39■■□□□ 1.65
SEMA4B-215ENST00000560089 PTPRKQ15262 1439 aa25.38■■□□□ 1.65
SEMA4B-215ENST00000560089 PTPN23Q9H3S7 1636 aa25.37■■□□□ 1.65
SEMA4B-215ENST00000560089 RBM10P98175 930 aaKnown RBP25.36■■□□□ 1.65
SEMA4B-215ENST00000560089 SMG6Q86US8 1419 aaKnown RBP25.34■■□□□ 1.65
SEMA4B-215ENST00000560089 RNF123Q5XPI4 1314 aa25.34■■□□□ 1.65
SEMA4B-215ENST00000560089 MRS2Q9HD23 443 aa25.33■■□□□ 1.65
SEMA4B-215ENST00000560089 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
SEMA4B-215ENST00000560089 ABCC2Q92887 1545 aa25.3■■□□□ 1.64
SEMA4B-215ENST00000560089 RRP7BPQ9NSQ0 103 aa25.3■■□□□ 1.64
SEMA4B-215ENST00000560089 AAMPQ13685 434 aa25.28■■□□□ 1.64
SEMA4B-215ENST00000560089 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
SEMA4B-215ENST00000560089 MS4A1P11836 297 aa25.27■■□□□ 1.64
SEMA4B-215ENST00000560089 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
SEMA4B-215ENST00000560089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.645e-6■■■■■ 30.5
SEMA4B-215ENST00000560089 PNNQ9H307 717 aaKnown RBP25.26■■□□□ 1.63
SEMA4B-215ENST00000560089 GPATCH8Q9UKJ3 1502 aaKnown RBP25.26■■□□□ 1.63
SEMA4B-215ENST00000560089 SLC4A3P48751 1232 aa25.25■■□□□ 1.63
SEMA4B-215ENST00000560089 FGD1P98174 961 aa25.24■■□□□ 1.63
SEMA4B-215ENST00000560089 FRAT2O75474 233 aaPredicted RBP25.24■■□□□ 1.63
SEMA4B-215ENST00000560089 MIA2Q96PC5 1412 aa25.23■■□□□ 1.63
SEMA4B-215ENST00000560089 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
SEMA4B-215ENST00000560089 PRKRIP1Q9H875 184 aaPredicted RBP25.2■■□□□ 1.62
SEMA4B-215ENST00000560089 ZCCHC11Q5TAX3 1644 aaKnown RBP25.18■■□□□ 1.62
SEMA4B-215ENST00000560089 ADCY10Q96PN6 1610 aa25.18■■□□□ 1.62
SEMA4B-215ENST00000560089 ABCC10Q5T3U5 1492 aa25.18■■□□□ 1.62
SEMA4B-215ENST00000560089 CNTLNQ9NXG0 1405 aa25.16■■□□□ 1.62
SEMA4B-215ENST00000560089 PDE4CQ08493 712 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms