RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 CADPS2Q86UW7 1296 aa15.58■□□□□ 0.08
CRTC3-207ENST00000560047 PDE4AP27815 886 aa15.54■□□□□ 0.08
CRTC3-207ENST00000560047 TMC2Q8TDI7 906 aa15.53■□□□□ 0.08
CRTC3-207ENST00000560047 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
CRTC3-207ENST00000560047 CRISPLD2Q9H0B8 497 aa15.5■□□□□ 0.07
CRTC3-207ENST00000560047 GPHNQ9NQX3 736 aaPredicted RBP15.5■□□□□ 0.07
CRTC3-207ENST00000560047 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
CRTC3-207ENST00000560047 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
CRTC3-207ENST00000560047 TMEM92Q6UXU6 159 aa15.48■□□□□ 0.07
CRTC3-207ENST00000560047 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
CRTC3-207ENST00000560047 C2orf72A6NCS6 295 aa15.47■□□□□ 0.07
CRTC3-207ENST00000560047 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
CRTC3-207ENST00000560047 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
CRTC3-207ENST00000560047 KIF3CO14782 793 aa15.45■□□□□ 0.06
CRTC3-207ENST00000560047 WDR70Q9NW82 654 aa15.43■□□□□ 0.06
CRTC3-207ENST00000560047 FOXK1P85037 733 aa15.4■□□□□ 0.06
CRTC3-207ENST00000560047 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
CRTC3-207ENST00000560047 MFSD10Q14728 455 aa15.39■□□□□ 0.05
CRTC3-207ENST00000560047 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
CRTC3-207ENST00000560047 DSG2Q14126 1118 aa15.37■□□□□ 0.05
CRTC3-207ENST00000560047 PPP1R15BQ5SWA1 713 aa15.36■□□□□ 0.05
CRTC3-207ENST00000560047 PLPP6Q8IY26 295 aa15.34■□□□□ 0.05
CRTC3-207ENST00000560047 SNPHO15079 494 aa15.27■□□□□ 0.04
CRTC3-207ENST00000560047 E2F4Q16254 413 aa15.26■□□□□ 0.03
CRTC3-207ENST00000560047 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
CRTC3-207ENST00000560047 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
CRTC3-207ENST00000560047 SLC34A2O95436 690 aa15.2■□□□□ 0.02
CRTC3-207ENST00000560047 HOXB3P14651 431 aaPredicted RBP15.19■□□□□ 0.02
CRTC3-207ENST00000560047 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
CRTC3-207ENST00000560047 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
CRTC3-207ENST00000560047 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
CRTC3-207ENST00000560047 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
CRTC3-207ENST00000560047 TBC1D12O60347 775 aa15.14■□□□□ 0.01
CRTC3-207ENST00000560047 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
CRTC3-207ENST00000560047 OXER1Q8TDS5 423 aa15.13■□□□□ 0.01
CRTC3-207ENST00000560047 KCNV2Q8TDN2 545 aa15.12■□□□□ 0.01
CRTC3-207ENST00000560047 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.01
CRTC3-207ENST00000560047 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
CRTC3-207ENST00000560047 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
CRTC3-207ENST00000560047 ARHGEF1Q92888 912 aaKnown RBP15.1■□□□□ 0.01
CRTC3-207ENST00000560047 ARIH1Q9Y4X5 557 aaPredicted RBP15.1■□□□□ 0.01
CRTC3-207ENST00000560047 PCDHGA4Q9Y5G9 962 aa15.08■□□□□ 0
CRTC3-207ENST00000560047 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
CRTC3-207ENST00000560047 DPYSL4O14531 572 aa15.05■□□□□ -0
CRTC3-207ENST00000560047 ARSIQ5FYB1 569 aa15.04■□□□□ -0
CRTC3-207ENST00000560047 GPR153Q6NV75 609 aa15.04■□□□□ -0
CRTC3-207ENST00000560047 HOXB1P14653 301 aaPredicted RBP15.01□□□□□ -0.01
CRTC3-207ENST00000560047 SPDYE16A6NNV3 312 aaPredicted RBP15□□□□□ -0.01
CRTC3-207ENST00000560047 ST18O60284 1047 aa15□□□□□ -0.01
CRTC3-207ENST00000560047 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
CRTC3-207ENST00000560047 EVI5O60447 810 aa14.97□□□□□ -0.01
CRTC3-207ENST00000560047 KHSRPQ92945 711 aaKnown RBP eCLIP14.97□□□□□ -0.01
CRTC3-207ENST00000560047 NUDT7P0C024 238 aa14.95□□□□□ -0.02
CRTC3-207ENST00000560047 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
CRTC3-207ENST00000560047 PDIA6Q15084 440 aa14.94□□□□□ -0.02
CRTC3-207ENST00000560047 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
CRTC3-207ENST00000560047 NBR1Q14596 966 aa14.89□□□□□ -0.03
CRTC3-207ENST00000560047 LCE2DQ5TA82 110 aaPredicted RBP14.87□□□□□ -0.03
CRTC3-207ENST00000560047 PTGER2P43116 358 aa14.86□□□□□ -0.03
CRTC3-207ENST00000560047 MARVELD3Q96A59 401 aa14.86□□□□□ -0.03
CRTC3-207ENST00000560047 EMP3P54852 163 aa14.85□□□□□ -0.03
CRTC3-207ENST00000560047 LHX6Q9UPM6 363 aa14.85□□□□□ -0.03
CRTC3-207ENST00000560047 SEMA3EO15041 775 aa14.84□□□□□ -0.03
CRTC3-207ENST00000560047 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
CRTC3-207ENST00000560047 PSDA5PKW4 1024 aaPredicted RBP14.82□□□□□ -0.04
CRTC3-207ENST00000560047 ERBB3P21860 1342 aa14.82□□□□□ -0.04
CRTC3-207ENST00000560047 BCANQ96GW7 911 aa14.8□□□□□ -0.04
CRTC3-207ENST00000560047 DDX12PQ92771 950 aa14.79□□□□□ -0.04
CRTC3-207ENST00000560047 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
CRTC3-207ENST00000560047 GRXCR2A6NFK2 248 aa14.77□□□□□ -0.05
CRTC3-207ENST00000560047 PHF14O94880 888 aa14.77□□□□□ -0.05
CRTC3-207ENST00000560047 SMYD5Q6GMV2 418 aa14.77□□□□□ -0.05
CRTC3-207ENST00000560047 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
CRTC3-207ENST00000560047 FAM205CA6NFA0 338 aa14.76□□□□□ -0.05
CRTC3-207ENST00000560047 FOSBP53539 338 aa14.76□□□□□ -0.05
CRTC3-207ENST00000560047 ZNF454Q8N9F8 522 aa14.76□□□□□ -0.05
CRTC3-207ENST00000560047 MLLT3P42568 568 aaPredicted RBP14.75□□□□□ -0.05
CRTC3-207ENST00000560047 EPAS1Q99814 870 aa14.75□□□□□ -0.05
CRTC3-207ENST00000560047 PPP4R3BQ5MIZ7 849 aa14.74□□□□□ -0.05
CRTC3-207ENST00000560047 VARS2Q5ST30 1063 aaKnown RBP14.74□□□□□ -0.05
CRTC3-207ENST00000560047 PCDHGA10Q9Y5H3 936 aa14.74□□□□□ -0.05
CRTC3-207ENST00000560047 TULP1O00294 542 aaPredicted RBP14.72□□□□□ -0.05
CRTC3-207ENST00000560047 TYW1BQ6NUM6 668 aa14.72□□□□□ -0.05
CRTC3-207ENST00000560047 FBXW7Q969H0 707 aa14.71□□□□□ -0.05
CRTC3-207ENST00000560047 ZDHHC16Q969W1 377 aa14.7□□□□□ -0.06
CRTC3-207ENST00000560047 HS3ST6Q96QI5 342 aa14.69□□□□□ -0.06
CRTC3-207ENST00000560047 OSBPP22059 807 aa14.68□□□□□ -0.06
CRTC3-207ENST00000560047 POTEB3A0JP26 581 aa14.65□□□□□ -0.06
CRTC3-207ENST00000560047 POTEBQ6S5H4 581 aa14.65□□□□□ -0.06
CRTC3-207ENST00000560047 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
CRTC3-207ENST00000560047 ZNF687Q8N1G0 1237 aa14.65□□□□□ -0.06
CRTC3-207ENST00000560047 POTEMA6NI47 508 aa14.64□□□□□ -0.07
CRTC3-207ENST00000560047 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
CRTC3-207ENST00000560047 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
CRTC3-207ENST00000560047 EN1Q05925 392 aaPredicted RBP14.62□□□□□ -0.07
CRTC3-207ENST00000560047 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
CRTC3-207ENST00000560047 MAP3K7O43318 606 aa14.6□□□□□ -0.07
CRTC3-207ENST00000560047 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
CRTC3-207ENST00000560047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
CRTC3-207ENST00000560047 C6orf132Q5T0Z8 1188 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms