RNA–Protein interactions for RNA: ENST00000559827.1

LINS1-206, Transcript of lines homolog 1, humanhuman

TSL 4

Gene LINS1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-206ENST00000559827 GPATCH8Q9UKJ3 1502 aaKnown RBP30.83■■■□□ 2.53
LINS1-206ENST00000559827 KANK4Q5T7N3 995 aaPredicted RBP30.82■■■□□ 2.52
LINS1-206ENST00000559827 ARHGAP5Q13017 1502 aa30.82■■■□□ 2.52
LINS1-206ENST00000559827 ITSN2Q9NZM3 1697 aa30.81■■■□□ 2.52
LINS1-206ENST00000559827 COL17A1Q9UMD9 1497 aaPredicted RBP30.81■■■□□ 2.52
LINS1-206ENST00000559827 AKNAQ7Z591 1439 aa30.78■■■□□ 2.52
LINS1-206ENST00000559827 CCNB3Q8WWL7 1395 aa30.78■■■□□ 2.52
LINS1-206ENST00000559827 EFCAB2Q5VUJ9 269 aa30.74■■■□□ 2.51
LINS1-206ENST00000559827 ADGRL1O94910 1474 aa30.71■■■□□ 2.51
LINS1-206ENST00000559827 FRMPD1Q5SYB0 1578 aa30.7■■■□□ 2.5
LINS1-206ENST00000559827 RICTORQ6R327 1708 aa30.7■■■□□ 2.5
LINS1-206ENST00000559827 ABCC1P33527 1531 aa30.69■■■□□ 2.5
LINS1-206ENST00000559827 SAMD9LQ8IVG5 1584 aa30.69■■■□□ 2.5
LINS1-206ENST00000559827 DENND4BO75064 1496 aaPredicted RBP30.67■■■□□ 2.5
LINS1-206ENST00000559827 CFDP1Q9UEE9 299 aaPredicted RBP30.63■■■□□ 2.49
LINS1-206ENST00000559827 MYOM3Q5VTT5 1437 aa30.63■■■□□ 2.49
LINS1-206ENST00000559827 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
LINS1-206ENST00000559827 SCAPERQ9BY12 1400 aa30.63■■■□□ 2.49
LINS1-206ENST00000559827 PLEKHH2Q8IVE3 1493 aa30.61■■■□□ 2.49
LINS1-206ENST00000559827 ZMYM4Q5VZL5 1548 aa30.61■■■□□ 2.49
LINS1-206ENST00000559827 ARHGEF12Q9NZN5 1544 aa30.58■■■□□ 2.49
LINS1-206ENST00000559827 MIA2Q96PC5 1412 aa30.58■■■□□ 2.49
LINS1-206ENST00000559827 KIAA1107Q9UPP5 1409 aa30.58■■■□□ 2.49
LINS1-206ENST00000559827 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
LINS1-206ENST00000559827 KDM5CP41229 1560 aa30.57■■■□□ 2.48
LINS1-206ENST00000559827 SYCP2Q9BX26 1530 aa30.57■■■□□ 2.48
LINS1-206ENST00000559827 RAPGEF3O95398 923 aa30.55■■■□□ 2.48
LINS1-206ENST00000559827 CAMSAP2Q08AD1 1489 aa30.54■■■□□ 2.48
LINS1-206ENST00000559827 ZNF777Q9ULD5 760 aaPredicted RBP30.51■■■□□ 2.47
LINS1-206ENST00000559827 MAGI2Q86UL8 1455 aa30.5■■■□□ 2.47
LINS1-206ENST00000559827 TRAPPC8Q9Y2L5 1435 aa30.49■■■□□ 2.47
LINS1-206ENST00000559827 MBD5Q9P267 1494 aa30.49■■■□□ 2.47
LINS1-206ENST00000559827 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
LINS1-206ENST00000559827 ZNF644Q9H582 1327 aaPredicted RBP30.47■■■□□ 2.47
LINS1-206ENST00000559827 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
LINS1-206ENST00000559827 ARHGEF40Q8TER5 1519 aa30.47■■■□□ 2.47
LINS1-206ENST00000559827 HECW2Q9P2P5 1572 aa30.46■■■□□ 2.47
LINS1-206ENST00000559827 ARHGEF5Q12774 1597 aa30.45■■■□□ 2.47
LINS1-206ENST00000559827 PTPN23Q9H3S7 1636 aa30.45■■■□□ 2.47
LINS1-206ENST00000559827 TCOF1Q13428 1488 aaKnown RBP30.44■■■□□ 2.46
LINS1-206ENST00000559827 MLH3Q9UHC1 1453 aa30.43■■■□□ 2.46
LINS1-206ENST00000559827 ZFYVE16Q7Z3T8 1539 aa30.42■■■□□ 2.46
LINS1-206ENST00000559827 AFAP1Q8N556 730 aa30.41■■■□□ 2.46
LINS1-206ENST00000559827 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
LINS1-206ENST00000559827 CCDC141Q6ZP82 1450 aa30.39■■■□□ 2.46
LINS1-206ENST00000559827 INO80Q9ULG1 1556 aaPredicted RBP30.39■■■□□ 2.46
LINS1-206ENST00000559827 KIDINS220Q9ULH0 1771 aa30.38■■■□□ 2.45
LINS1-206ENST00000559827 YEATS2Q9ULM3 1422 aa30.36■■■□□ 2.45
LINS1-206ENST00000559827 ABCA6Q8N139 1617 aa30.33■■■□□ 2.45
LINS1-206ENST00000559827 DIP2CQ9Y2E4 1556 aa30.33■■■□□ 2.45
LINS1-206ENST00000559827 ATP7AQ04656 1500 aa30.33■■■□□ 2.45
LINS1-206ENST00000559827 RSPH4AQ5TD94 716 aa30.33■■■□□ 2.45
LINS1-206ENST00000559827 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
LINS1-206ENST00000559827 CROCC2H7BZ55 1655 aa30.3■■■□□ 2.44
LINS1-206ENST00000559827 DNMT1P26358 1616 aaKnown RBP30.3■■■□□ 2.44
LINS1-206ENST00000559827 REREQ9P2R6 1566 aa30.29■■■□□ 2.44
LINS1-206ENST00000559827 MAST1Q9Y2H9 1570 aa30.29■■■□□ 2.44
LINS1-206ENST00000559827 RTEL1-TNFRSF6BF6WH68 1400 aa30.29■■■□□ 2.44
LINS1-206ENST00000559827 SPAG9O60271 1321 aaKnown RBP30.28■■■□□ 2.44
LINS1-206ENST00000559827 ATP10AO60312 1499 aa30.26■■■□□ 2.44
LINS1-206ENST00000559827 SHANK2Q9UPX8 1470 aa30.25■■■□□ 2.43
LINS1-206ENST00000559827 C9orf84Q5VXU9 1444 aa30.25■■■□□ 2.43
LINS1-206ENST00000559827 RRBP1Q9P2E9 1410 aaKnown RBP30.23■■■□□ 2.43
LINS1-206ENST00000559827 SIGLEC1Q9BZZ2 1709 aa30.23■■■□□ 2.43
LINS1-206ENST00000559827 DAPK1P53355 1430 aa30.22■■■□□ 2.43
LINS1-206ENST00000559827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.22■■■□□ 2.43
LINS1-206ENST00000559827 ABCC5O15440 1437 aa30.22■■■□□ 2.43
LINS1-206ENST00000559827 ADGBQ8N7X0 1667 aa30.2■■■□□ 2.43
LINS1-206ENST00000559827 PLXNC1O60486 1568 aa30.19■■■□□ 2.42
LINS1-206ENST00000559827 TSPY4P0CV99 314 aa30.16■■■□□ 2.42
LINS1-206ENST00000559827 TSPY10P0CW01 314 aa30.16■■■□□ 2.42
LINS1-206ENST00000559827 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
LINS1-206ENST00000559827 AGLP35573 1532 aa30.15■■■□□ 2.42
LINS1-206ENST00000559827 FAM50AQ14320 339 aaKnown RBP30.13■■■□□ 2.41
LINS1-206ENST00000559827 BCORL1Q5H9F3 1711 aa30.12■■■□□ 2.41
LINS1-206ENST00000559827 A2MP01023 1474 aa30.12■■■□□ 2.41
LINS1-206ENST00000559827 ADGRL2O95490 1459 aa30.09■■■□□ 2.41
LINS1-206ENST00000559827 KDM4FA0A1W2PPD8 638 aa30.06■■■□□ 2.4
LINS1-206ENST00000559827 ADAMTSL3P82987 1691 aa30.06■■■□□ 2.4
LINS1-206ENST00000559827 DHX29Q7Z478 1369 aaKnown RBP30.03■■■□□ 2.4
LINS1-206ENST00000559827 PTPRKQ15262 1439 aa30.03■■■□□ 2.4
LINS1-206ENST00000559827 ARID4BQ4LE39 1312 aaPredicted RBP30.01■■■□□ 2.4
LINS1-206ENST00000559827 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.39
LINS1-206ENST00000559827 NCOA1Q15788 1441 aa30■■■□□ 2.39
LINS1-206ENST00000559827 EIF2AK4Q9P2K8 1649 aaKnown RBP30■■■□□ 2.39
LINS1-206ENST00000559827 ANKRD30AQ9BXX3 1397 aa29.99■■■□□ 2.39
LINS1-206ENST00000559827 KIF15Q9NS87 1388 aa29.98■■■□□ 2.39
LINS1-206ENST00000559827 ROCK1Q13464 1354 aa29.96■■■□□ 2.39
LINS1-206ENST00000559827 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
LINS1-206ENST00000559827 ERBINQ96RT1 1412 aa29.94■■■□□ 2.38
LINS1-206ENST00000559827 FER1L4A9Z1Z3 1794 aa29.93■■■□□ 2.38
LINS1-206ENST00000559827 CHIC2Q9UKJ5 165 aa29.92■■■□□ 2.38
LINS1-206ENST00000559827 RNF17Q9BXT8 1623 aaKnown RBP29.92■■■□□ 2.38
LINS1-206ENST00000559827 RRP7BPQ9NSQ0 103 aa29.88■■■□□ 2.37
LINS1-206ENST00000559827 FAM135AQ9P2D6 1515 aa29.87■■■□□ 2.37
LINS1-206ENST00000559827 RIMS1Q86UR5 1692 aaKnown RBP29.86■■■□□ 2.37
LINS1-206ENST00000559827 MLECQ14165 292 aa29.84■■■□□ 2.37
LINS1-206ENST00000559827 DEPDC5O75140 1603 aa29.84■■■□□ 2.37
LINS1-206ENST00000559827 MROH1Q8NDA8 1641 aa29.83■■■□□ 2.37
LINS1-206ENST00000559827 ITGAEP38570 1179 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms