RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 CLGNO14967 610 aa8.03□□□□□ -1.12
HMGN2P47-201ENST00000559378 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
HMGN2P47-201ENST00000559378 TMTC2Q8N394 836 aa8.03□□□□□ -1.12
HMGN2P47-201ENST00000559378 VGFO15240 615 aaPredicted RBP8.02□□□□□ -1.13
HMGN2P47-201ENST00000559378 LMOD2Q6P5Q4 547 aa8.02□□□□□ -1.13
HMGN2P47-201ENST00000559378 LAS1LQ9Y4W2 734 aaKnown RBP8.02□□□□□ -1.13
HMGN2P47-201ENST00000559378 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
HMGN2P47-201ENST00000559378 CCDC82Q8N4S0 544 aa8.01□□□□□ -1.13
HMGN2P47-201ENST00000559378 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMGN2P47-201ENST00000559378 NOL8Q76FK4 1167 aaKnown RBP8□□□□□ -1.13
HMGN2P47-201ENST00000559378 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
HMGN2P47-201ENST00000559378 ANKRD13AQ8IZ07 590 aa8□□□□□ -1.13
HMGN2P47-201ENST00000559378 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
HMGN2P47-201ENST00000559378 CACNB1Q02641 598 aaPredicted RBP7.99□□□□□ -1.13
HMGN2P47-201ENST00000559378 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
HMGN2P47-201ENST00000559378 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
HMGN2P47-201ENST00000559378 VASPP50552 380 aaPredicted RBP7.97□□□□□ -1.13
HMGN2P47-201ENST00000559378 MYH16Q9H6N6 1097 aa7.97□□□□□ -1.13
HMGN2P47-201ENST00000559378 AXDND1Q5T1B0 1012 aaPredicted RBP7.95□□□□□ -1.14
HMGN2P47-201ENST00000559378 FAM9BQ8IZU0 186 aa7.95□□□□□ -1.14
HMGN2P47-201ENST00000559378 ECM2O94769 699 aaPredicted RBP7.94□□□□□ -1.14
HMGN2P47-201ENST00000559378 BRD1O95696 1058 aa7.94□□□□□ -1.14
HMGN2P47-201ENST00000559378 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
HMGN2P47-201ENST00000559378 SGSM3Q96HU1 749 aa7.93□□□□□ -1.14
HMGN2P47-201ENST00000559378 SPATA32Q96LK8 384 aa7.93□□□□□ -1.14
HMGN2P47-201ENST00000559378 STAC3Q96MF2 364 aa7.93□□□□□ -1.14
HMGN2P47-201ENST00000559378 SMARCA5O60264 1052 aaPredicted RBP7.92□□□□□ -1.14
HMGN2P47-201ENST00000559378 MMP14P50281 582 aa7.92□□□□□ -1.14
HMGN2P47-201ENST00000559378 SLC24A3Q9HC58 644 aa7.92□□□□□ -1.14
HMGN2P47-201ENST00000559378 TPD52L2O43399 206 aaKnown RBP7.91□□□□□ -1.14
HMGN2P47-201ENST00000559378 ATXN8OSP0DMR3 200 aa7.91□□□□□ -1.14
HMGN2P47-201ENST00000559378 NEUROD1Q13562 356 aa7.91□□□□□ -1.14
HMGN2P47-201ENST00000559378 AMOTL2Q9Y2J4 779 aa7.91□□□□□ -1.14
HMGN2P47-201ENST00000559378 MARCH6O60337 910 aa7.9□□□□□ -1.14
HMGN2P47-201ENST00000559378 GORABQ5T7V8 394 aa7.9□□□□□ -1.14
HMGN2P47-201ENST00000559378 TERF2IPQ9NYB0 399 aa7.9□□□□□ -1.14
HMGN2P47-201ENST00000559378 TTC36A6NLP5 189 aa7.89□□□□□ -1.15
HMGN2P47-201ENST00000559378 FOXD4L6Q3SYB3 417 aaPredicted RBP7.89□□□□□ -1.15
HMGN2P47-201ENST00000559378 FOXD4L3Q6VB84 417 aaPredicted RBP7.89□□□□□ -1.15
HMGN2P47-201ENST00000559378 ANP32BQ92688 251 aaKnown RBP7.89□□□□□ -1.15
HMGN2P47-201ENST00000559378 ERCC3P19447 782 aa7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 TSHZ1Q6ZSZ6 1077 aa7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 BARGINQ6ZT62 677 aa7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
HMGN2P47-201ENST00000559378 CEP120Q8N960 986 aa7.87□□□□□ -1.15
HMGN2P47-201ENST00000559378 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
HMGN2P47-201ENST00000559378 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
HMGN2P47-201ENST00000559378 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 HMGB1P1B2RPK0 211 aaPredicted RBP7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 NBPF1Q3BBV0 1214 aa7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 RINLQ6ZS11 566 aa7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 NME8Q8N427 588 aa7.86□□□□□ -1.15
HMGN2P47-201ENST00000559378 RGL2O15211 777 aa7.85□□□□□ -1.15
HMGN2P47-201ENST00000559378 RALBP1Q15311 655 aa7.85□□□□□ -1.15
HMGN2P47-201ENST00000559378 CASC1Q6TDU7 716 aa7.85□□□□□ -1.15
HMGN2P47-201ENST00000559378 ZC3H15Q8WU90 426 aaKnown RBP7.85□□□□□ -1.15
HMGN2P47-201ENST00000559378 TRIM44Q96DX7 344 aaPredicted RBP7.85□□□□□ -1.15
HMGN2P47-201ENST00000559378 IRF5Q13568 498 aa7.84□□□□□ -1.15
HMGN2P47-201ENST00000559378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGN2P47-201ENST00000559378 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
HMGN2P47-201ENST00000559378 RBM27Q9P2N5 1060 aaKnown RBP7.84□□□□□ -1.15
HMGN2P47-201ENST00000559378 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
HMGN2P47-201ENST00000559378 RRP9O43818 475 aaKnown RBP7.83□□□□□ -1.16
HMGN2P47-201ENST00000559378 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
HMGN2P47-201ENST00000559378 MYBPC2Q14324 1141 aa7.83□□□□□ -1.16
HMGN2P47-201ENST00000559378 DMRT2Q9Y5R5 561 aa7.83□□□□□ -1.16
HMGN2P47-201ENST00000559378 ANKRD62A6NC57 917 aa7.82□□□□□ -1.16
HMGN2P47-201ENST00000559378 NRDCO43847 1150 aa7.82□□□□□ -1.16
HMGN2P47-201ENST00000559378 MCCD1P59942 119 aaPredicted RBP7.82□□□□□ -1.16
HMGN2P47-201ENST00000559378 APBB1IPQ7Z5R6 666 aaPredicted RBP7.82□□□□□ -1.16
HMGN2P47-201ENST00000559378 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
HMGN2P47-201ENST00000559378 TRAK2O60296 914 aa7.81□□□□□ -1.16
HMGN2P47-201ENST00000559378 RETREG2Q8NC44 543 aa7.81□□□□□ -1.16
HMGN2P47-201ENST00000559378 SLC52A1Q9NWF4 448 aa7.81□□□□□ -1.16
HMGN2P47-201ENST00000559378 HDAC5Q9UQL6 1122 aa7.81□□□□□ -1.16
HMGN2P47-201ENST00000559378 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 CALD1Q05682 793 aaKnown RBP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 MAPK8IP2Q13387 824 aaPredicted RBP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 PPARGC1BQ86YN6 1023 aaKnown RBP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 MTA3Q9BTC8 594 aa7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 UBA5Q9GZZ9 404 aa7.8□□□□□ -1.16
HMGN2P47-201ENST00000559378 TESPA1A2RU30 521 aaPredicted RBP7.79□□□□□ -1.16
HMGN2P47-201ENST00000559378 SDR16C5Q8N3Y7 309 aa7.79□□□□□ -1.16
HMGN2P47-201ENST00000559378 RIOK3O14730 519 aaKnown RBP7.78□□□□□ -1.16
HMGN2P47-201ENST00000559378 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
HMGN2P47-201ENST00000559378 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
HMGN2P47-201ENST00000559378 SPINK5Q9NQ38 1064 aaPredicted RBP7.78□□□□□ -1.16
HMGN2P47-201ENST00000559378 A6NJR5 290 aa7.77□□□□□ -1.17
HMGN2P47-201ENST00000559378 UNCXA6NJT0 531 aa7.77□□□□□ -1.17
HMGN2P47-201ENST00000559378 FLIIQ13045 1269 aa7.77□□□□□ -1.17
HMGN2P47-201ENST00000559378 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
HMGN2P47-201ENST00000559378 KRBA2Q6ZNG9 492 aa7.77□□□□□ -1.17
HMGN2P47-201ENST00000559378 LONRF3Q496Y0 759 aa7.76□□□□□ -1.17
HMGN2P47-201ENST00000559378 MICAL1Q8TDZ2 1067 aa7.76□□□□□ -1.17
HMGN2P47-201ENST00000559378 MORC4Q8TE76 937 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms