RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, human

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-219	ENST00000559328	ARHGAP5	Q13017	1502 aa		31.96	■■■□□ 2.71
MARK3-219	ENST00000559328	FANCA	O15360	1455 aa		31.96	■■■□□ 2.71
MARK3-219	ENST00000559328	NEO1	Q92859	1461 aa		31.94	■■■□□ 2.7
MARK3-219	ENST00000559328	EFCAB2	Q5VUJ9	269 aa		31.9	■■■□□ 2.7
MARK3-219	ENST00000559328	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.88	■■■□□ 2.69
MARK3-219	ENST00000559328	KDM6B	O15054	1643 aa		31.87	■■■□□ 2.69
MARK3-219	ENST00000559328	AKNA	Q7Z591	1439 aa		31.87	■■■□□ 2.69
MARK3-219	ENST00000559328	PHLDB1	Q86UU1	1377 aa		31.87	■■■□□ 2.69
MARK3-219	ENST00000559328	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.85	■■■□□ 2.69
MARK3-219	ENST00000559328	MYOM3	Q5VTT5	1437 aa		31.82	■■■□□ 2.68
MARK3-219	ENST00000559328	SAMD9L	Q8IVG5	1584 aa		31.81	■■■□□ 2.68
MARK3-219	ENST00000559328	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.8	■■■□□ 2.68
MARK3-219	ENST00000559328	ADGRL1	O94910	1474 aa		31.79	■■■□□ 2.68
MARK3-219	ENST00000559328	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.79	■■■□□ 2.68
MARK3-219	ENST00000559328	ABCC1	P33527	1531 aa		31.76	■■■□□ 2.68
MARK3-219	ENST00000559328	SCAPER	Q9BY12	1400 aa		31.75	■■■□□ 2.67
MARK3-219	ENST00000559328	MIA2	Q96PC5	1412 aa		31.74	■■■□□ 2.67
MARK3-219	ENST00000559328	RICTOR	Q6R327	1708 aa		31.73	■■■□□ 2.67
MARK3-219	ENST00000559328	DENND4B	O75064	1496 aa	Predicted RBP	31.72	■■■□□ 2.67
MARK3-219	ENST00000559328	PLEKHH2	Q8IVE3	1493 aa		31.71	■■■□□ 2.67
MARK3-219	ENST00000559328	CAMSAP2	Q08AD1	1489 aa		31.7	■■■□□ 2.66
MARK3-219	ENST00000559328	ZNF644	Q9H582	1327 aa	Predicted RBP	31.7	■■■□□ 2.66
MARK3-219	ENST00000559328	ARHGEF12	Q9NZN5	1544 aa		31.7	■■■□□ 2.66
MARK3-219	ENST00000559328	FRMPD1	Q5SYB0	1578 aa		31.69	■■■□□ 2.66
MARK3-219	ENST00000559328	SYCP2	Q9BX26	1530 aa		31.69	■■■□□ 2.66
MARK3-219	ENST00000559328	PTPN23	Q9H3S7	1636 aa		31.68	■■■□□ 2.66
MARK3-219	ENST00000559328	FGD6	Q6ZV73	1430 aa		31.68	■■■□□ 2.66
MARK3-219	ENST00000559328	RAPGEF3	O95398	923 aa		31.67	■■■□□ 2.66
MARK3-219	ENST00000559328	POGZ	Q7Z3K3	1410 aa		31.66	■■■□□ 2.66
MARK3-219	ENST00000559328	KIAA1107	Q9UPP5	1409 aa		31.66	■■■□□ 2.66
MARK3-219	ENST00000559328	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.63	■■■□□ 2.65
MARK3-219	ENST00000559328	TRAPPC8	Q9Y2L5	1435 aa		31.61	■■■□□ 2.65
MARK3-219	ENST00000559328	ZNF518A	Q6AHZ1	1483 aa		31.6	■■■□□ 2.65
MARK3-219	ENST00000559328	TCOF1	Q13428	1488 aa	Known RBP	31.59	■■■□□ 2.65
MARK3-219	ENST00000559328	MBD5	Q9P267	1494 aa		31.59	■■■□□ 2.65
MARK3-219	ENST00000559328	KDM5C	P41229	1560 aa		31.57	■■■□□ 2.64
MARK3-219	ENST00000559328	AFAP1	Q8N556	730 aa		31.57	■■■□□ 2.64
MARK3-219	ENST00000559328	ZMYM4	Q5VZL5	1548 aa		31.57	■■■□□ 2.64
MARK3-219	ENST00000559328	ARHGEF5	Q12774	1597 aa		31.56	■■■□□ 2.64
MARK3-219	ENST00000559328	CCDC141	Q6ZP82	1450 aa		31.51	■■■□□ 2.63
MARK3-219	ENST00000559328	HECW2	Q9P2P5	1572 aa		31.5	■■■□□ 2.63
MARK3-219	ENST00000559328	FAM50A	Q14320	339 aa	Known RBP	31.49	■■■□□ 2.63
MARK3-219	ENST00000559328	RSPH4A	Q5TD94	716 aa		31.49	■■■□□ 2.63
MARK3-219	ENST00000559328	DNMT1	P26358	1616 aa	Known RBP	31.47	■■■□□ 2.63
MARK3-219	ENST00000559328	MAGI2	Q86UL8	1455 aa		31.46	■■■□□ 2.63
MARK3-219	ENST00000559328	RRBP1	Q9P2E9	1410 aa	Known RBP	31.46	■■■□□ 2.63
MARK3-219	ENST00000559328	MLH3	Q9UHC1	1453 aa		31.46	■■■□□ 2.63
MARK3-219	ENST00000559328	KIDINS220	Q9ULH0	1771 aa		31.45	■■■□□ 2.63
MARK3-219	ENST00000559328	ZFYVE16	Q7Z3T8	1539 aa		31.45	■■■□□ 2.63
MARK3-219	ENST00000559328	CROCC2	H7BZ55	1655 aa		31.45	■■■□□ 2.63
MARK3-219	ENST00000559328	SPAG9	O60271	1321 aa	Known RBP	31.44	■■■□□ 2.62
MARK3-219	ENST00000559328	INO80	Q9ULG1	1556 aa	Predicted RBP	31.43	■■■□□ 2.62
MARK3-219	ENST00000559328	MYT1L	Q9UL68	1186 aa		31.43	■■■□□ 2.62
MARK3-219	ENST00000559328	ARHGEF40	Q8TER5	1519 aa		31.43	■■■□□ 2.62
MARK3-219	ENST00000559328	ATP7A	Q04656	1500 aa		31.41	■■■□□ 2.62
MARK3-219	ENST00000559328	ABCC5	O15440	1437 aa		31.41	■■■□□ 2.62
MARK3-219	ENST00000559328	DAPK1	P53355	1430 aa		31.41	■■■□□ 2.62
MARK3-219	ENST00000559328	YEATS2	Q9ULM3	1422 aa		31.41	■■■□□ 2.62
MARK3-219	ENST00000559328	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.4	■■■□□ 2.62
MARK3-219	ENST00000559328	MAST1	Q9Y2H9	1570 aa		31.39	■■■□□ 2.61
MARK3-219	ENST00000559328	ABCA6	Q8N139	1617 aa		31.38	■■■□□ 2.61
MARK3-219	ENST00000559328	TSPY4	P0CV99	314 aa		31.38	■■■□□ 2.61
MARK3-219	ENST00000559328	TSPY10	P0CW01	314 aa		31.38	■■■□□ 2.61
MARK3-219	ENST00000559328	DIP2C	Q9Y2E4	1556 aa		31.36	■■■□□ 2.61
MARK3-219	ENST00000559328	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.36	■■■□□ 2.61
MARK3-219	ENST00000559328	SHANK2	Q9UPX8	1470 aa		31.34	■■■□□ 2.61
MARK3-219	ENST00000559328	C9orf84	Q5VXU9	1444 aa		31.33	■■■□□ 2.61
MARK3-219	ENST00000559328	ATP10A	O60312	1499 aa		31.31	■■■□□ 2.6
MARK3-219	ENST00000559328	ADGB	Q8N7X0	1667 aa		31.3	■■■□□ 2.6
MARK3-219	ENST00000559328	PLXNC1	O60486	1568 aa		31.26	■■■□□ 2.6
MARK3-219	ENST00000559328	SIGLEC1	Q9BZZ2	1709 aa		31.25	■■■□□ 2.59
MARK3-219	ENST00000559328	ITGAE	P38570	1179 aa		31.25	■■■□□ 2.59
MARK3-219	ENST00000559328	PTPRK	Q15262	1439 aa		31.24	■■■□□ 2.59
MARK3-219	ENST00000559328	CHIC2	Q9UKJ5	165 aa		31.24	■■■□□ 2.59
MARK3-219	ENST00000559328	RERE	Q9P2R6	1566 aa		31.24	■■■□□ 2.59
MARK3-219	ENST00000559328	A2M	P01023	1474 aa		31.21	■■■□□ 2.59
MARK3-219	ENST00000559328	ADGRL2	O95490	1459 aa		31.2	■■■□□ 2.58
MARK3-219	ENST00000559328	ANKRD30A	Q9BXX3	1397 aa		31.17	■■■□□ 2.58
MARK3-219	ENST00000559328	NCOA1	Q15788	1441 aa		31.15	■■■□□ 2.58
MARK3-219	ENST00000559328	RRP7BP	Q9NSQ0	103 aa		31.14	■■■□□ 2.58
MARK3-219	ENST00000559328	KIF15	Q9NS87	1388 aa		31.14	■■■□□ 2.58
MARK3-219	ENST00000559328	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.13	■■■□□ 2.57
MARK3-219	ENST00000559328	DHX29	Q7Z478	1369 aa	Known RBP	31.13	■■■□□ 2.57
MARK3-219	ENST00000559328	AGL	P35573	1532 aa		31.13	■■■□□ 2.57
MARK3-219	ENST00000559328	DUOX2	Q9NRD8	1548 aa		31.13	■■■□□ 2.57
MARK3-219	ENST00000559328	ROCK1	Q13464	1354 aa		31.11	■■■□□ 2.57
MARK3-219	ENST00000559328	BCORL1	Q5H9F3	1711 aa		31.09	■■■□□ 2.57
MARK3-219	ENST00000559328	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.05	■■■□□ 2.56
MARK3-219	ENST00000559328	ERBIN	Q96RT1	1412 aa		31.02	■■■□□ 2.56
MARK3-219	ENST00000559328	MLEC	Q14165	292 aa		31	■■■□□ 2.55
MARK3-219	ENST00000559328	GCC2	Q8IWJ2	1684 aa		31	■■■□□ 2.55
MARK3-219	ENST00000559328	KIF3B	O15066	747 aa		30.99	■■■□□ 2.55
MARK3-219	ENST00000559328	ADAMTSL3	P82987	1691 aa		30.99	■■■□□ 2.55
MARK3-219	ENST00000559328	ANKRD50	Q9ULJ7	1429 aa		30.97	■■■□□ 2.55
MARK3-219	ENST00000559328	RNF17	Q9BXT8	1623 aa	Known RBP	30.95	■■■□□ 2.55
MARK3-219	ENST00000559328	FER1L4	A9Z1Z3	1794 aa		30.94	■■■□□ 2.54
MARK3-219	ENST00000559328	NAIP	Q13075	1403 aa		30.92	■■■□□ 2.54
MARK3-219	ENST00000559328	MADD	Q8WXG6	1647 aa		30.92	■■■□□ 2.54
MARK3-219	ENST00000559328	GGT6	Q6P531	493 aa		30.92	■■■□□ 2.54
MARK3-219	ENST00000559328	HFM1	A2PYH4	1435 aa		30.91	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms