RNA–Protein interactions for RNA: ENST00000559177.5

TRPM1-209, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 5

Gene TRPM1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-209ENST00000559177 PCGF6Q9BYE7 350 aa16.24■□□□□ 0.19
TRPM1-209ENST00000559177 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
TRPM1-209ENST00000559177 CDC42BPBQ9Y5S2 1711 aa16.23■□□□□ 0.19
TRPM1-209ENST00000559177 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
TRPM1-209ENST00000559177 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
TRPM1-209ENST00000559177 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
TRPM1-209ENST00000559177 FRMPD1Q5SYB0 1578 aa16.22■□□□□ 0.19
TRPM1-209ENST00000559177 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
TRPM1-209ENST00000559177 CDC42BPAQ5VT25 1732 aa16.21■□□□□ 0.19
TRPM1-209ENST00000559177 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
TRPM1-209ENST00000559177 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
TRPM1-209ENST00000559177 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
TRPM1-209ENST00000559177 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
TRPM1-209ENST00000559177 HRCP23327 699 aa16.19■□□□□ 0.18
TRPM1-209ENST00000559177 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
TRPM1-209ENST00000559177 RICTORQ6R327 1708 aa16.19■□□□□ 0.18
TRPM1-209ENST00000559177 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
TRPM1-209ENST00000559177 APLP2Q06481 763 aa16.18■□□□□ 0.18
TRPM1-209ENST00000559177 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
TRPM1-209ENST00000559177 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
TRPM1-209ENST00000559177 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
TRPM1-209ENST00000559177 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
TRPM1-209ENST00000559177 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
TRPM1-209ENST00000559177 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
TRPM1-209ENST00000559177 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
TRPM1-209ENST00000559177 ABCC1P33527 1531 aa16.13■□□□□ 0.17
TRPM1-209ENST00000559177 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
TRPM1-209ENST00000559177 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
TRPM1-209ENST00000559177 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
TRPM1-209ENST00000559177 HNRNPMP52272 730 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRPM1-209ENST00000559177 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
TRPM1-209ENST00000559177 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
TRPM1-209ENST00000559177 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
TRPM1-209ENST00000559177 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
TRPM1-209ENST00000559177 ITSN2Q9NZM3 1697 aa16.1■□□□□ 0.17
TRPM1-209ENST00000559177 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
TRPM1-209ENST00000559177 ZFYVE16Q7Z3T8 1539 aa16.09■□□□□ 0.17
TRPM1-209ENST00000559177 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
TRPM1-209ENST00000559177 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.17
TRPM1-209ENST00000559177 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
TRPM1-209ENST00000559177 KDM5CP41229 1560 aa16.07■□□□□ 0.16
TRPM1-209ENST00000559177 ARID4BQ4LE39 1312 aaPredicted RBP16.06■□□□□ 0.16
TRPM1-209ENST00000559177 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
TRPM1-209ENST00000559177 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
TRPM1-209ENST00000559177 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
TRPM1-209ENST00000559177 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
TRPM1-209ENST00000559177 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
TRPM1-209ENST00000559177 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.16
TRPM1-209ENST00000559177 ATP10AO60312 1499 aa16.02■□□□□ 0.16
TRPM1-209ENST00000559177 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
TRPM1-209ENST00000559177 SPAG9O60271 1321 aaKnown RBP16.01■□□□□ 0.15
TRPM1-209ENST00000559177 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
TRPM1-209ENST00000559177 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
TRPM1-209ENST00000559177 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
TRPM1-209ENST00000559177 ABCA6Q8N139 1617 aa15.99■□□□□ 0.15
TRPM1-209ENST00000559177 DIP2CQ9Y2E4 1556 aa15.99■□□□□ 0.15
TRPM1-209ENST00000559177 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
TRPM1-209ENST00000559177 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
TRPM1-209ENST00000559177 MLECQ14165 292 aa15.97■□□□□ 0.15
TRPM1-209ENST00000559177 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
TRPM1-209ENST00000559177 ATP7AQ04656 1500 aa15.96■□□□□ 0.15
TRPM1-209ENST00000559177 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
TRPM1-209ENST00000559177 INO80Q9ULG1 1556 aaPredicted RBP15.95■□□□□ 0.14
TRPM1-209ENST00000559177 ADAMTSL3P82987 1691 aa15.94■□□□□ 0.14
TRPM1-209ENST00000559177 FGD6Q6ZV73 1430 aa15.94■□□□□ 0.14
TRPM1-209ENST00000559177 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
TRPM1-209ENST00000559177 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
TRPM1-209ENST00000559177 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
TRPM1-209ENST00000559177 MADDQ8WXG6 1647 aa15.91■□□□□ 0.14
TRPM1-209ENST00000559177 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
TRPM1-209ENST00000559177 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
TRPM1-209ENST00000559177 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
TRPM1-209ENST00000559177 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
TRPM1-209ENST00000559177 A2MP01023 1474 aa15.89■□□□□ 0.13
TRPM1-209ENST00000559177 TCOF1Q13428 1488 aaKnown RBP15.88■□□□□ 0.13
TRPM1-209ENST00000559177 AGLP35573 1532 aa15.88■□□□□ 0.13
TRPM1-209ENST00000559177 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
TRPM1-209ENST00000559177 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
TRPM1-209ENST00000559177 PTPRMP28827 1452 aa15.87■□□□□ 0.13
TRPM1-209ENST00000559177 RIMS1Q86UR5 1692 aaKnown RBP15.87■□□□□ 0.13
TRPM1-209ENST00000559177 ABCC5O15440 1437 aa15.86■□□□□ 0.13
TRPM1-209ENST00000559177 ZEB1P37275 1124 aaPredicted RBP15.86■□□□□ 0.13
TRPM1-209ENST00000559177 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
TRPM1-209ENST00000559177 PLXNC1O60486 1568 aa15.85■□□□□ 0.13
TRPM1-209ENST00000559177 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
TRPM1-209ENST00000559177 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
TRPM1-209ENST00000559177 DAPK1P53355 1430 aa15.84■□□□□ 0.13
TRPM1-209ENST00000559177 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
TRPM1-209ENST00000559177 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
TRPM1-209ENST00000559177 GGT6Q6P531 493 aa15.83■□□□□ 0.12
TRPM1-209ENST00000559177 CHIC2Q9UKJ5 165 aa15.83■□□□□ 0.12
TRPM1-209ENST00000559177 CROCC2H7BZ55 1655 aa15.82■□□□□ 0.12
TRPM1-209ENST00000559177 KIF3BO15066 747 aa15.8■□□□□ 0.12
TRPM1-209ENST00000559177 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
TRPM1-209ENST00000559177 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
TRPM1-209ENST00000559177 SHANK2Q9UPX8 1470 aa15.8■□□□□ 0.12
TRPM1-209ENST00000559177 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
TRPM1-209ENST00000559177 KIF15Q9NS87 1388 aa15.76■□□□□ 0.11
TRPM1-209ENST00000559177 ITGAEP38570 1179 aa15.76■□□□□ 0.11
TRPM1-209ENST00000559177 ANKRD30AQ9BXX3 1397 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms