RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 ARHGEF40Q8TER5 1519 aa34.43■■■■□ 3.1
CRNDE-205ENST00000558952 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
CRNDE-205ENST00000558952 ARID4BQ4LE39 1312 aaPredicted RBP34.39■■■■□ 3.1
CRNDE-205ENST00000558952 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
CRNDE-205ENST00000558952 LOC105371045A0A1W2PR82 267 aa34.38■■■■□ 3.09
CRNDE-205ENST00000558952 ZFYVE16Q7Z3T8 1539 aa34.37■■■■□ 3.09
CRNDE-205ENST00000558952 PREX2Q70Z35 1606 aa34.36■■■■□ 3.09
CRNDE-205ENST00000558952 CDC42BPBQ9Y5S2 1711 aa34.34■■■■□ 3.09
CRNDE-205ENST00000558952 MTUS2Q5JR59 1369 aa34.32■■■■□ 3.08
CRNDE-205ENST00000558952 ZNF518AQ6AHZ1 1483 aa34.31■■■■□ 3.08
CRNDE-205ENST00000558952 YEATS2Q9ULM3 1422 aa34.3■■■■□ 3.08
CRNDE-205ENST00000558952 BCORL1Q5H9F3 1711 aa34.26■■■■□ 3.07
CRNDE-205ENST00000558952 CDC42BPAQ5VT25 1732 aa34.26■■■■□ 3.07
CRNDE-205ENST00000558952 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
CRNDE-205ENST00000558952 ABCC1P33527 1531 aa34.22■■■■□ 3.07
CRNDE-205ENST00000558952 AFAP1Q8N556 730 aa34.22■■■■□ 3.07
CRNDE-205ENST00000558952 MYT1LQ9UL68 1186 aa34.22■■■■□ 3.07
CRNDE-205ENST00000558952 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.07
CRNDE-205ENST00000558952 GPATCH8Q9UKJ3 1502 aaKnown RBP34.2■■■■□ 3.07
CRNDE-205ENST00000558952 KDM5CP41229 1560 aa34.2■■■■□ 3.07
CRNDE-205ENST00000558952 CCNB3Q8WWL7 1395 aa34.2■■■■□ 3.07
CRNDE-205ENST00000558952 ZNF777Q9ULD5 760 aaPredicted RBP34.19■■■■□ 3.06
CRNDE-205ENST00000558952 ATP10AO60312 1499 aa34.18■■■■□ 3.06
CRNDE-205ENST00000558952 ITSN2Q9NZM3 1697 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 HECW2Q9P2P5 1572 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 PTPRMP28827 1452 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 C9orf84Q5VXU9 1444 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 VPS8Q8N3P4 1428 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 MADDQ8WXG6 1647 aa34.15■■■■□ 3.06
CRNDE-205ENST00000558952 ARHGEF12Q9NZN5 1544 aa34.14■■■■□ 3.06
CRNDE-205ENST00000558952 CFDP1Q9UEE9 299 aaPredicted RBP34.14■■■■□ 3.06
CRNDE-205ENST00000558952 TRAPPC8Q9Y2L5 1435 aa34.13■■■■□ 3.05
CRNDE-205ENST00000558952 SAMD9LQ8IVG5 1584 aa34.11■■■■□ 3.05
CRNDE-205ENST00000558952 MLH3Q9UHC1 1453 aa34.1■■■■□ 3.05
CRNDE-205ENST00000558952 SIGLEC1Q9BZZ2 1709 aa34.1■■■■□ 3.05
CRNDE-205ENST00000558952 MLECQ14165 292 aa34.08■■■■□ 3.05
CRNDE-205ENST00000558952 PLEKHH2Q8IVE3 1493 aa34.07■■■■□ 3.04
CRNDE-205ENST00000558952 SYCP2Q9BX26 1530 aa34.06■■■■□ 3.04
CRNDE-205ENST00000558952 TIAM1Q13009 1591 aa34.06■■■■□ 3.04
CRNDE-205ENST00000558952 DIP2CQ9Y2E4 1556 aa34.05■■■■□ 3.04
CRNDE-205ENST00000558952 RIMS1Q86UR5 1692 aaKnown RBP34.05■■■■□ 3.04
CRNDE-205ENST00000558952 HNRNPMP52272 730 aaKnown RBP eCLIP34.02■■■■□ 3.04
CRNDE-205ENST00000558952 KIAA1107Q9UPP5 1409 aa34.02■■■■□ 3.04
CRNDE-205ENST00000558952 SUPT6HQ7KZ85 1726 aaKnown RBP34.01■■■■□ 3.03
CRNDE-205ENST00000558952 ABCA6Q8N139 1617 aa34.01■■■■□ 3.03
CRNDE-205ENST00000558952 REREQ9P2R6 1566 aa33.98■■■■□ 3.03
CRNDE-205ENST00000558952 NCOA2Q15596 1464 aa33.97■■■■□ 3.03
CRNDE-205ENST00000558952 SPAG9O60271 1321 aaKnown RBP33.96■■■■□ 3.03
CRNDE-205ENST00000558952 FER1L4A9Z1Z3 1794 aa33.95■■■■□ 3.02
CRNDE-205ENST00000558952 KIDINS220Q9ULH0 1771 aa33.95■■■■□ 3.02
CRNDE-205ENST00000558952 PLPPR3Q6T4P5 718 aa33.92■■■■□ 3.02
CRNDE-205ENST00000558952 LRRC9Q6ZRR7 1453 aa33.92■■■■□ 3.02
CRNDE-205ENST00000558952 MAP3K1Q13233 1512 aa33.9■■■■□ 3.02
CRNDE-205ENST00000558952 ZNF644Q9H582 1327 aaPredicted RBP33.89■■■■□ 3.02
CRNDE-205ENST00000558952 AGLP35573 1532 aa33.87■■■■□ 3.01
CRNDE-205ENST00000558952 ATP7AQ04656 1500 aa33.87■■■■□ 3.01
CRNDE-205ENST00000558952 APLP2Q06481 763 aa33.84■■■■□ 3.01
CRNDE-205ENST00000558952 INO80Q9ULG1 1556 aaPredicted RBP33.83■■■■□ 3.01
CRNDE-205ENST00000558952 MBD5Q9P267 1494 aa33.81■■■■□ 3
CRNDE-205ENST00000558952 ESF1Q9H501 851 aaKnown RBP33.8■■■■□ 3
CRNDE-205ENST00000558952 CAMSAP2Q08AD1 1489 aa33.8■■■■□ 3
CRNDE-205ENST00000558952 KANK4Q5T7N3 995 aaPredicted RBP33.79■■■■□ 3
CRNDE-205ENST00000558952 LMTK3Q96Q04 1460 aa33.75■■■□□ 2.99
CRNDE-205ENST00000558952 A2MP01023 1474 aa33.74■■■□□ 2.99
CRNDE-205ENST00000558952 CCDC141Q6ZP82 1450 aa33.74■■■□□ 2.99
CRNDE-205ENST00000558952 RSPH4AQ5TD94 716 aa33.73■■■□□ 2.99
CRNDE-205ENST00000558952 RTEL1-TNFRSF6BF6WH68 1400 aa33.71■■■□□ 2.99
CRNDE-205ENST00000558952 CEBPAP49715 358 aaPredicted RBP33.7■■■□□ 2.99
CRNDE-205ENST00000558952 PLXNC1O60486 1568 aa33.68■■■□□ 2.98
CRNDE-205ENST00000558952 ADGBQ8N7X0 1667 aa33.68■■■□□ 2.98
CRNDE-205ENST00000558952 MYOM3Q5VTT5 1437 aa33.66■■■□□ 2.98
CRNDE-205ENST00000558952 CNTLNQ9NXG0 1405 aa33.66■■■□□ 2.98
CRNDE-205ENST00000558952 ARHGEF5Q12774 1597 aa33.64■■■□□ 2.98
CRNDE-205ENST00000558952 MIA2Q96PC5 1412 aa33.63■■■□□ 2.97
CRNDE-205ENST00000558952 TSPY4P0CV99 314 aa33.62■■■□□ 2.97
CRNDE-205ENST00000558952 TSPY10P0CW01 314 aa33.62■■■□□ 2.97
CRNDE-205ENST00000558952 C3P01024 1663 aa33.59■■■□□ 2.97
CRNDE-205ENST00000558952 PREX1Q8TCU6 1659 aa33.59■■■□□ 2.97
CRNDE-205ENST00000558952 HSPA2P54652 639 aa33.58■■■□□ 2.97
CRNDE-205ENST00000558952 GGT6Q6P531 493 aa33.57■■■□□ 2.96
CRNDE-205ENST00000558952 DHX29Q7Z478 1369 aaKnown RBP33.57■■■□□ 2.96
CRNDE-205ENST00000558952 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
CRNDE-205ENST00000558952 MROH2AA6NES4 1674 aa33.53■■■□□ 2.96
CRNDE-205ENST00000558952 PPP6R1Q9UPN7 881 aa33.5■■■□□ 2.95
CRNDE-205ENST00000558952 ZMYM3Q14202 1370 aa33.49■■■□□ 2.95
CRNDE-205ENST00000558952 CLTCQ00610 1675 aaKnown RBP33.48■■■□□ 2.95
CRNDE-205ENST00000558952 MAST1Q9Y2H9 1570 aa33.47■■■□□ 2.95
CRNDE-205ENST00000558952 KIF3BO15066 747 aa33.46■■■□□ 2.95
CRNDE-205ENST00000558952 SETD1BQ9UPS6 1966 aaKnown RBP33.45■■■□□ 2.94
CRNDE-205ENST00000558952 PTPN23Q9H3S7 1636 aa33.43■■■□□ 2.94
CRNDE-205ENST00000558952 NPATQ14207 1427 aa33.43■■■□□ 2.94
CRNDE-205ENST00000558952 FGD6Q6ZV73 1430 aa33.41■■■□□ 2.94
CRNDE-205ENST00000558952 FAM135AQ9P2D6 1515 aa33.34■■■□□ 2.93
CRNDE-205ENST00000558952 TCOF1Q13428 1488 aaKnown RBP33.34■■■□□ 2.93
CRNDE-205ENST00000558952 SHANK2Q9UPX8 1470 aa33.33■■■□□ 2.93
CRNDE-205ENST00000558952 KDM5DQ9BY66 1539 aa33.33■■■□□ 2.93
CRNDE-205ENST00000558952 ABCC5O15440 1437 aa33.32■■■□□ 2.92
CRNDE-205ENST00000558952 PTPRKQ15262 1439 aa33.31■■■□□ 2.92
CRNDE-205ENST00000558952 WASHC2CQ9Y4E1 1318 aa33.3■■■□□ 2.92
CRNDE-205ENST00000558952 CROCC2H7BZ55 1655 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms