RNA–Protein interactions for RNA: ENST00000558933.5

IDH3A-210, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-210ENST00000558933 MAGI2Q86UL8 1455 aa22.29■■□□□ 1.16
IDH3A-210ENST00000558933 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
IDH3A-210ENST00000558933 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
IDH3A-210ENST00000558933 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
IDH3A-210ENST00000558933 ARID4BQ4LE39 1312 aaPredicted RBP22.27■■□□□ 1.16
IDH3A-210ENST00000558933 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
IDH3A-210ENST00000558933 SCAPERQ9BY12 1400 aa22.25■■□□□ 1.15
IDH3A-210ENST00000558933 PREX2Q70Z35 1606 aa22.24■■□□□ 1.15
IDH3A-210ENST00000558933 MADDQ8WXG6 1647 aa22.22■■□□□ 1.15
IDH3A-210ENST00000558933 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
IDH3A-210ENST00000558933 PTPRMP28827 1452 aa22.2■■□□□ 1.14
IDH3A-210ENST00000558933 CDC42BPBQ9Y5S2 1711 aa22.2■■□□□ 1.14
IDH3A-210ENST00000558933 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
IDH3A-210ENST00000558933 YEATS2Q9ULM3 1422 aa22.16■■□□□ 1.14
IDH3A-210ENST00000558933 KDM5CP41229 1560 aa22.16■■□□□ 1.14
IDH3A-210ENST00000558933 CDC42BPAQ5VT25 1732 aa22.15■■□□□ 1.14
IDH3A-210ENST00000558933 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.13
IDH3A-210ENST00000558933 FER1L4A9Z1Z3 1794 aa22.13■■□□□ 1.13
IDH3A-210ENST00000558933 ABCC1P33527 1531 aa22.13■■□□□ 1.13
IDH3A-210ENST00000558933 ITSN2Q9NZM3 1697 aa22.12■■□□□ 1.13
IDH3A-210ENST00000558933 ATP10AO60312 1499 aa22.11■■□□□ 1.13
IDH3A-210ENST00000558933 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
IDH3A-210ENST00000558933 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
IDH3A-210ENST00000558933 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
IDH3A-210ENST00000558933 REREQ9P2R6 1566 aa22.06■■□□□ 1.12
IDH3A-210ENST00000558933 MTUS2Q5JR59 1369 aa22.05■■□□□ 1.12
IDH3A-210ENST00000558933 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
IDH3A-210ENST00000558933 MLH3Q9UHC1 1453 aa22.04■■□□□ 1.12
IDH3A-210ENST00000558933 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
IDH3A-210ENST00000558933 ABCA6Q8N139 1617 aa22.02■■□□□ 1.12
IDH3A-210ENST00000558933 ARHGEF12Q9NZN5 1544 aa22.01■■□□□ 1.11
IDH3A-210ENST00000558933 PLEKHH2Q8IVE3 1493 aa22.01■■□□□ 1.11
IDH3A-210ENST00000558933 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
IDH3A-210ENST00000558933 AFAP1Q8N556 730 aa22■■□□□ 1.11
IDH3A-210ENST00000558933 MLECQ14165 292 aa21.99■■□□□ 1.11
IDH3A-210ENST00000558933 GPATCH8Q9UKJ3 1502 aaKnown RBP21.99■■□□□ 1.11
IDH3A-210ENST00000558933 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
IDH3A-210ENST00000558933 SYCP2Q9BX26 1530 aa21.98■■□□□ 1.11
IDH3A-210ENST00000558933 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
IDH3A-210ENST00000558933 KIDINS220Q9ULH0 1771 aa21.96■■□□□ 1.11
IDH3A-210ENST00000558933 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
IDH3A-210ENST00000558933 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
IDH3A-210ENST00000558933 AGLP35573 1532 aa21.95■■□□□ 1.1
IDH3A-210ENST00000558933 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
IDH3A-210ENST00000558933 SUPT6HQ7KZ85 1726 aaKnown RBP21.93■■□□□ 1.1
IDH3A-210ENST00000558933 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
IDH3A-210ENST00000558933 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
IDH3A-210ENST00000558933 PREX1Q8TCU6 1659 aa21.92■■□□□ 1.1
IDH3A-210ENST00000558933 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
IDH3A-210ENST00000558933 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
IDH3A-210ENST00000558933 INO80Q9ULG1 1556 aaPredicted RBP21.89■■□□□ 1.09
IDH3A-210ENST00000558933 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
IDH3A-210ENST00000558933 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
IDH3A-210ENST00000558933 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
IDH3A-210ENST00000558933 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
IDH3A-210ENST00000558933 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
IDH3A-210ENST00000558933 C3P01024 1663 aa21.83■■□□□ 1.09
IDH3A-210ENST00000558933 HNRNPMP52272 730 aaKnown RBP eCLIP21.82■■□□□ 1.08
IDH3A-210ENST00000558933 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
IDH3A-210ENST00000558933 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
IDH3A-210ENST00000558933 SETD1BQ9UPS6 1966 aaKnown RBP21.81■■□□□ 1.08
IDH3A-210ENST00000558933 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
IDH3A-210ENST00000558933 UHRF1BP1Q6BDS2 1440 aa21.8■■□□□ 1.08
IDH3A-210ENST00000558933 A2MP01023 1474 aa21.78■■□□□ 1.08
IDH3A-210ENST00000558933 CAMSAP2Q08AD1 1489 aa21.76■■□□□ 1.07
IDH3A-210ENST00000558933 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
IDH3A-210ENST00000558933 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
IDH3A-210ENST00000558933 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
IDH3A-210ENST00000558933 RTEL1-TNFRSF6BF6WH68 1400 aa21.74■■□□□ 1.07
IDH3A-210ENST00000558933 HSPA2P54652 639 aa21.74■■□□□ 1.07
IDH3A-210ENST00000558933 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
IDH3A-210ENST00000558933 MBD5Q9P267 1494 aa21.73■■□□□ 1.07
IDH3A-210ENST00000558933 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
IDH3A-210ENST00000558933 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
IDH3A-210ENST00000558933 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
IDH3A-210ENST00000558933 ARHGEF5Q12774 1597 aa21.7■■□□□ 1.06
IDH3A-210ENST00000558933 RSPH4AQ5TD94 716 aa21.7■■□□□ 1.06
IDH3A-210ENST00000558933 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
IDH3A-210ENST00000558933 NPATQ14207 1427 aa21.68■■□□□ 1.06
IDH3A-210ENST00000558933 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
IDH3A-210ENST00000558933 APLP2Q06481 763 aa21.64■■□□□ 1.05
IDH3A-210ENST00000558933 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
IDH3A-210ENST00000558933 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
IDH3A-210ENST00000558933 FBXO41Q8TF61 875 aa21.62■■□□□ 1.05
IDH3A-210ENST00000558933 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 DHX29Q7Z478 1369 aaKnown RBP21.61■■□□□ 1.05
IDH3A-210ENST00000558933 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
IDH3A-210ENST00000558933 GGT6Q6P531 493 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 MYO3AQ8NEV4 1616 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 MIA2Q96PC5 1412 aa21.61■■□□□ 1.05
IDH3A-210ENST00000558933 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
IDH3A-210ENST00000558933 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
IDH3A-210ENST00000558933 MAST1Q9Y2H9 1570 aa21.6■■□□□ 1.05
IDH3A-210ENST00000558933 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.04
IDH3A-210ENST00000558933 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
IDH3A-210ENST00000558933 CEP170BQ9Y4F5 1589 aaPredicted RBP21.54■■□□□ 1.04
IDH3A-210ENST00000558933 PTPRTO14522 1441 aa21.53■■□□□ 1.04
IDH3A-210ENST00000558933 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms