RNA–Protein interactions for RNA: ENST00000558832.5

ZEB1-213, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-213ENST00000558832 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
ZEB1-213ENST00000558832 PDE4AP27815 886 aa12.22□□□□□ -0.45
ZEB1-213ENST00000558832 MFSD10Q14728 455 aa12.22□□□□□ -0.45
ZEB1-213ENST00000558832 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
ZEB1-213ENST00000558832 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
ZEB1-213ENST00000558832 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
ZEB1-213ENST00000558832 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
ZEB1-213ENST00000558832 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
ZEB1-213ENST00000558832 G3V3G9 751 aa12.17□□□□□ -0.46
ZEB1-213ENST00000558832 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
ZEB1-213ENST00000558832 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
ZEB1-213ENST00000558832 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
ZEB1-213ENST00000558832 POTEB2H3BUK9 544 aa12.16□□□□□ -0.46
ZEB1-213ENST00000558832 KIF3CO14782 793 aa12.16□□□□□ -0.46
ZEB1-213ENST00000558832 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
ZEB1-213ENST00000558832 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
ZEB1-213ENST00000558832 C2orf72A6NCS6 295 aa12.14□□□□□ -0.47
ZEB1-213ENST00000558832 DSG2Q14126 1118 aa12.12□□□□□ -0.47
ZEB1-213ENST00000558832 E2F4Q16254 413 aa12.12□□□□□ -0.47
ZEB1-213ENST00000558832 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
ZEB1-213ENST00000558832 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
ZEB1-213ENST00000558832 FOXK1P85037 733 aa12.09□□□□□ -0.47
ZEB1-213ENST00000558832 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
ZEB1-213ENST00000558832 LHX8Q68G74 356 aa12.07□□□□□ -0.48
ZEB1-213ENST00000558832 C3orf67Q6ZVT6 689 aa12.06□□□□□ -0.48
ZEB1-213ENST00000558832 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
ZEB1-213ENST00000558832 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
ZEB1-213ENST00000558832 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
ZEB1-213ENST00000558832 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
ZEB1-213ENST00000558832 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
ZEB1-213ENST00000558832 ABCC9O60706 1549 aa11.95□□□□□ -0.5
ZEB1-213ENST00000558832 DPYSL4O14531 572 aa11.93□□□□□ -0.5
ZEB1-213ENST00000558832 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
ZEB1-213ENST00000558832 SEMA3EO15041 775 aa11.9□□□□□ -0.5
ZEB1-213ENST00000558832 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
ZEB1-213ENST00000558832 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
ZEB1-213ENST00000558832 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZEB1-213ENST00000558832 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
ZEB1-213ENST00000558832 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
ZEB1-213ENST00000558832 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
ZEB1-213ENST00000558832 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
ZEB1-213ENST00000558832 SLC34A2O95436 690 aa11.86□□□□□ -0.51
ZEB1-213ENST00000558832 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
ZEB1-213ENST00000558832 PDIA6Q15084 440 aa11.85□□□□□ -0.51
ZEB1-213ENST00000558832 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
ZEB1-213ENST00000558832 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
ZEB1-213ENST00000558832 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
ZEB1-213ENST00000558832 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
ZEB1-213ENST00000558832 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
ZEB1-213ENST00000558832 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
ZEB1-213ENST00000558832 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
ZEB1-213ENST00000558832 EVI5O60447 810 aa11.76□□□□□ -0.53
ZEB1-213ENST00000558832 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
ZEB1-213ENST00000558832 TBC1D12O60347 775 aa11.74□□□□□ -0.53
ZEB1-213ENST00000558832 SMYD5Q6GMV2 418 aa11.74□□□□□ -0.53
ZEB1-213ENST00000558832 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.536e-7■■■■□ 21.8
ZEB1-213ENST00000558832 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
ZEB1-213ENST00000558832 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
ZEB1-213ENST00000558832 PTGER2P43116 358 aa11.72□□□□□ -0.53
ZEB1-213ENST00000558832 ARSIQ5FYB1 569 aa11.71□□□□□ -0.53
ZEB1-213ENST00000558832 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
ZEB1-213ENST00000558832 CCDC180Q9P1Z9 1646 aa11.71□□□□□ -0.54
ZEB1-213ENST00000558832 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
ZEB1-213ENST00000558832 DDX12PQ92771 950 aa11.69□□□□□ -0.54
ZEB1-213ENST00000558832 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
ZEB1-213ENST00000558832 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
ZEB1-213ENST00000558832 NUDT7P0C024 238 aa11.67□□□□□ -0.54
ZEB1-213ENST00000558832 PRIM1P49642 420 aaKnown RBP11.67□□□□□ -0.54
ZEB1-213ENST00000558832 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
ZEB1-213ENST00000558832 OSBPP22059 807 aa11.66□□□□□ -0.54
ZEB1-213ENST00000558832 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
ZEB1-213ENST00000558832 SNPHO15079 494 aa11.64□□□□□ -0.55
ZEB1-213ENST00000558832 ZNF710Q8N1W2 664 aa11.64□□□□□ -0.55
ZEB1-213ENST00000558832 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
ZEB1-213ENST00000558832 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
ZEB1-213ENST00000558832 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
ZEB1-213ENST00000558832 ZMYND10O75800 440 aa11.58□□□□□ -0.56
ZEB1-213ENST00000558832 PHF14O94880 888 aa11.58□□□□□ -0.56
ZEB1-213ENST00000558832 FOSBP53539 338 aa11.58□□□□□ -0.56
ZEB1-213ENST00000558832 LHX6Q9UPM6 363 aa11.58□□□□□ -0.56
ZEB1-213ENST00000558832 GPR37O15354 613 aa11.57□□□□□ -0.56
ZEB1-213ENST00000558832 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
ZEB1-213ENST00000558832 EPAS1Q99814 870 aa11.55□□□□□ -0.56
ZEB1-213ENST00000558832 ST18O60284 1047 aa11.54□□□□□ -0.56
ZEB1-213ENST00000558832 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
ZEB1-213ENST00000558832 GPIHBP1Q8IV16 184 aa11.54□□□□□ -0.56
ZEB1-213ENST00000558832 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
ZEB1-213ENST00000558832 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
ZEB1-213ENST00000558832 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
ZEB1-213ENST00000558832 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
ZEB1-213ENST00000558832 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
ZEB1-213ENST00000558832 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
ZEB1-213ENST00000558832 CDHR5Q9HBB8 845 aa11.51□□□□□ -0.57
ZEB1-213ENST00000558832 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
ZEB1-213ENST00000558832 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
ZEB1-213ENST00000558832 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
ZEB1-213ENST00000558832 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
ZEB1-213ENST00000558832 MAP3K7O43318 606 aa11.48□□□□□ -0.57
ZEB1-213ENST00000558832 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
ZEB1-213ENST00000558832 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms