RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
TSPAN3-205ENST00000558745 SCAPERQ9BY12 1400 aa21.84■■□□□ 1.09
TSPAN3-205ENST00000558745 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
TSPAN3-205ENST00000558745 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.08
TSPAN3-205ENST00000558745 CDC42BPBQ9Y5S2 1711 aa21.82■■□□□ 1.08
TSPAN3-205ENST00000558745 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
TSPAN3-205ENST00000558745 GPATCH8Q9UKJ3 1502 aaKnown RBP21.81■■□□□ 1.08
TSPAN3-205ENST00000558745 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
TSPAN3-205ENST00000558745 CFAP74Q9C0B2 1584 aa21.8■■□□□ 1.08
TSPAN3-205ENST00000558745 CCNB3Q8WWL7 1395 aa21.79■■□□□ 1.08
TSPAN3-205ENST00000558745 EHBP1L1Q8N3D4 1523 aa21.79■■□□□ 1.08
TSPAN3-205ENST00000558745 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
TSPAN3-205ENST00000558745 CDC42BPAQ5VT25 1732 aa21.79■■□□□ 1.08
TSPAN3-205ENST00000558745 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
TSPAN3-205ENST00000558745 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
TSPAN3-205ENST00000558745 LRRC9Q6ZRR7 1453 aa21.76■■□□□ 1.07
TSPAN3-205ENST00000558745 APLP2Q06481 763 aa21.76■■□□□ 1.07
TSPAN3-205ENST00000558745 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
TSPAN3-205ENST00000558745 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
TSPAN3-205ENST00000558745 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
TSPAN3-205ENST00000558745 HNRNPMP52272 730 aaKnown RBP eCLIP21.74■■□□□ 1.07
TSPAN3-205ENST00000558745 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
TSPAN3-205ENST00000558745 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
TSPAN3-205ENST00000558745 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
TSPAN3-205ENST00000558745 TRAPPC8Q9Y2L5 1435 aa21.71■■□□□ 1.07
TSPAN3-205ENST00000558745 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
TSPAN3-205ENST00000558745 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
TSPAN3-205ENST00000558745 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
TSPAN3-205ENST00000558745 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
TSPAN3-205ENST00000558745 ABCC1P33527 1531 aa21.67■■□□□ 1.06
TSPAN3-205ENST00000558745 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
TSPAN3-205ENST00000558745 ZNF518AQ6AHZ1 1483 aa21.63■■□□□ 1.05
TSPAN3-205ENST00000558745 ZMYM4Q5VZL5 1548 aa21.63■■□□□ 1.05
TSPAN3-205ENST00000558745 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
TSPAN3-205ENST00000558745 SYCP2Q9BX26 1530 aa21.63■■□□□ 1.05
TSPAN3-205ENST00000558745 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
TSPAN3-205ENST00000558745 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
TSPAN3-205ENST00000558745 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
TSPAN3-205ENST00000558745 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
TSPAN3-205ENST00000558745 KDM5CP41229 1560 aa21.59■■□□□ 1.05
TSPAN3-205ENST00000558745 LMTK3Q96Q04 1460 aa21.58■■□□□ 1.04
TSPAN3-205ENST00000558745 KIAA1107Q9UPP5 1409 aa21.58■■□□□ 1.04
TSPAN3-205ENST00000558745 MLECQ14165 292 aa21.56■■□□□ 1.04
TSPAN3-205ENST00000558745 ATP10AO60312 1499 aa21.56■■□□□ 1.04
TSPAN3-205ENST00000558745 SIGLEC1Q9BZZ2 1709 aa21.56■■□□□ 1.04
TSPAN3-205ENST00000558745 SPAG9O60271 1321 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-205ENST00000558745 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
TSPAN3-205ENST00000558745 MBD5Q9P267 1494 aa21.55■■□□□ 1.04
TSPAN3-205ENST00000558745 MLH3Q9UHC1 1453 aa21.55■■□□□ 1.04
TSPAN3-205ENST00000558745 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
TSPAN3-205ENST00000558745 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
TSPAN3-205ENST00000558745 KIDINS220Q9ULH0 1771 aa21.51■■□□□ 1.03
TSPAN3-205ENST00000558745 DIP2CQ9Y2E4 1556 aa21.5■■□□□ 1.03
TSPAN3-205ENST00000558745 ABCA6Q8N139 1617 aa21.5■■□□□ 1.03
TSPAN3-205ENST00000558745 C9orf84Q5VXU9 1444 aa21.49■■□□□ 1.03
TSPAN3-205ENST00000558745 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
TSPAN3-205ENST00000558745 BCORL1Q5H9F3 1711 aa21.46■■□□□ 1.03
TSPAN3-205ENST00000558745 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
TSPAN3-205ENST00000558745 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
TSPAN3-205ENST00000558745 ADAMTSL3P82987 1691 aa21.44■■□□□ 1.02
TSPAN3-205ENST00000558745 RSPH4AQ5TD94 716 aa21.44■■□□□ 1.02
TSPAN3-205ENST00000558745 CCDC141Q6ZP82 1450 aa21.44■■□□□ 1.02
TSPAN3-205ENST00000558745 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
TSPAN3-205ENST00000558745 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
TSPAN3-205ENST00000558745 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
TSPAN3-205ENST00000558745 INO80Q9ULG1 1556 aaPredicted RBP21.41■■□□□ 1.02
TSPAN3-205ENST00000558745 MADDQ8WXG6 1647 aa21.4■■□□□ 1.02
TSPAN3-205ENST00000558745 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
TSPAN3-205ENST00000558745 SOCS7O14512 581 aa21.39■■□□□ 1.01
TSPAN3-205ENST00000558745 ARHGEF5Q12774 1597 aa21.38■■□□□ 1.01
TSPAN3-205ENST00000558745 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
TSPAN3-205ENST00000558745 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
TSPAN3-205ENST00000558745 A2MP01023 1474 aa21.37■■□□□ 1.01
TSPAN3-205ENST00000558745 PTPRMP28827 1452 aa21.37■■□□□ 1.01
TSPAN3-205ENST00000558745 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
TSPAN3-205ENST00000558745 ABCC5O15440 1437 aa21.35■■□□□ 1.01
TSPAN3-205ENST00000558745 RIMS1Q86UR5 1692 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-205ENST00000558745 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
TSPAN3-205ENST00000558745 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
TSPAN3-205ENST00000558745 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
TSPAN3-205ENST00000558745 AGLP35573 1532 aa21.34■■□□□ 1.01
TSPAN3-205ENST00000558745 GGT6Q6P531 493 aa21.33■■□□□ 1.01
TSPAN3-205ENST00000558745 DHX29Q7Z478 1369 aaKnown RBP21.32■■□□□ 1
TSPAN3-205ENST00000558745 DAPK1P53355 1430 aa21.3■■□□□ 1
TSPAN3-205ENST00000558745 KIF3BO15066 747 aa21.29■■□□□ 1
TSPAN3-205ENST00000558745 ADGBQ8N7X0 1667 aa21.29■■□□□ 1
TSPAN3-205ENST00000558745 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
TSPAN3-205ENST00000558745 FER1L4A9Z1Z3 1794 aa21.28■■□□□ 1
TSPAN3-205ENST00000558745 PLXNC1O60486 1568 aa21.28■■□□□ 1
TSPAN3-205ENST00000558745 DISP3Q9P2K9 1392 aa21.27■■□□□ 1
TSPAN3-205ENST00000558745 ESF1Q9H501 851 aaKnown RBP21.27■□□□□ 0.99
TSPAN3-205ENST00000558745 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
TSPAN3-205ENST00000558745 ITGAEP38570 1179 aa21.25■□□□□ 0.99
TSPAN3-205ENST00000558745 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
TSPAN3-205ENST00000558745 DNMT1P26358 1616 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-205ENST00000558745 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
TSPAN3-205ENST00000558745 CERKQ8TCT0 537 aa21.21■□□□□ 0.99
TSPAN3-205ENST00000558745 CROCC2H7BZ55 1655 aa21.21■□□□□ 0.99
TSPAN3-205ENST00000558745 KIF15Q9NS87 1388 aa21.2■□□□□ 0.98
TSPAN3-205ENST00000558745 SHANK2Q9UPX8 1470 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms