RNA–Protein interactions for RNA: ENST00000558705.1

PKNOX2-209, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-209ENST00000558705 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
PKNOX2-209ENST00000558705 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
PKNOX2-209ENST00000558705 POGZQ7Z3K3 1410 aa22.62■■□□□ 1.21
PKNOX2-209ENST00000558705 RIMS1Q86UR5 1692 aaKnown RBP22.59■■□□□ 1.21
PKNOX2-209ENST00000558705 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
PKNOX2-209ENST00000558705 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
PKNOX2-209ENST00000558705 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
PKNOX2-209ENST00000558705 EFCAB2Q5VUJ9 269 aa22.55■■□□□ 1.2
PKNOX2-209ENST00000558705 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
PKNOX2-209ENST00000558705 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
PKNOX2-209ENST00000558705 CLIP1P30622 1438 aa22.54■■□□□ 1.2
PKNOX2-209ENST00000558705 ILDR1Q86SU0 546 aaPredicted RBP22.53■■□□□ 1.2
PKNOX2-209ENST00000558705 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
PKNOX2-209ENST00000558705 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
PKNOX2-209ENST00000558705 FYCO1Q9BQS8 1478 aa22.48■■□□□ 1.19
PKNOX2-209ENST00000558705 KDM5CP41229 1560 aa22.48■■□□□ 1.19
PKNOX2-209ENST00000558705 MLECQ14165 292 aa22.48■■□□□ 1.19
PKNOX2-209ENST00000558705 ATP10AO60312 1499 aa22.47■■□□□ 1.19
PKNOX2-209ENST00000558705 LMTK3Q96Q04 1460 aa22.47■■□□□ 1.19
PKNOX2-209ENST00000558705 AFAP1Q8N556 730 aa22.47■■□□□ 1.19
PKNOX2-209ENST00000558705 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
PKNOX2-209ENST00000558705 ARHGEF12Q9NZN5 1544 aa22.47■■□□□ 1.19
PKNOX2-209ENST00000558705 FER1L4A9Z1Z3 1794 aa22.46■■□□□ 1.19
PKNOX2-209ENST00000558705 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
PKNOX2-209ENST00000558705 C9orf84Q5VXU9 1444 aa22.45■■□□□ 1.18
PKNOX2-209ENST00000558705 CDC42BPAQ5VT25 1732 aa22.45■■□□□ 1.18
PKNOX2-209ENST00000558705 ABCC1P33527 1531 aa22.43■■□□□ 1.18
PKNOX2-209ENST00000558705 TRAPPC8Q9Y2L5 1435 aa22.42■■□□□ 1.18
PKNOX2-209ENST00000558705 ITSN2Q9NZM3 1697 aa22.42■■□□□ 1.18
PKNOX2-209ENST00000558705 DIP2CQ9Y2E4 1556 aa22.42■■□□□ 1.18
PKNOX2-209ENST00000558705 ABCA6Q8N139 1617 aa22.41■■□□□ 1.18
PKNOX2-209ENST00000558705 HSPA2P54652 639 aa22.36■■□□□ 1.17
PKNOX2-209ENST00000558705 MLH3Q9UHC1 1453 aa22.35■■□□□ 1.17
PKNOX2-209ENST00000558705 SAMD9LQ8IVG5 1584 aa22.35■■□□□ 1.17
PKNOX2-209ENST00000558705 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
PKNOX2-209ENST00000558705 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
PKNOX2-209ENST00000558705 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.17
PKNOX2-209ENST00000558705 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
PKNOX2-209ENST00000558705 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
PKNOX2-209ENST00000558705 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
PKNOX2-209ENST00000558705 SYCP2Q9BX26 1530 aa22.3■■□□□ 1.16
PKNOX2-209ENST00000558705 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
PKNOX2-209ENST00000558705 AGLP35573 1532 aa22.26■■□□□ 1.15
PKNOX2-209ENST00000558705 HNRNPMP52272 730 aaKnown RBP eCLIP22.25■■□□□ 1.15
PKNOX2-209ENST00000558705 PREX1Q8TCU6 1659 aa22.25■■□□□ 1.15
PKNOX2-209ENST00000558705 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
PKNOX2-209ENST00000558705 C3P01024 1663 aa22.22■■□□□ 1.15
PKNOX2-209ENST00000558705 CCNB3Q8WWL7 1395 aa22.22■■□□□ 1.15
PKNOX2-209ENST00000558705 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
PKNOX2-209ENST00000558705 CFDP1Q9UEE9 299 aaPredicted RBP22.2■■□□□ 1.14
PKNOX2-209ENST00000558705 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
PKNOX2-209ENST00000558705 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
PKNOX2-209ENST00000558705 ATP7AQ04656 1500 aa22.18■■□□□ 1.14
PKNOX2-209ENST00000558705 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
PKNOX2-209ENST00000558705 ZNF644Q9H582 1327 aaPredicted RBP22.18■■□□□ 1.14
PKNOX2-209ENST00000558705 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
PKNOX2-209ENST00000558705 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
PKNOX2-209ENST00000558705 FBXO41Q8TF61 875 aa22.16■■□□□ 1.14
PKNOX2-209ENST00000558705 PLEKHH2Q8IVE3 1493 aa22.15■■□□□ 1.14
PKNOX2-209ENST00000558705 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
PKNOX2-209ENST00000558705 STRCQ7RTU9 1775 aa22.13■■□□□ 1.13
PKNOX2-209ENST00000558705 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
PKNOX2-209ENST00000558705 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
PKNOX2-209ENST00000558705 UHRF1BP1Q6BDS2 1440 aa22.12■■□□□ 1.13
PKNOX2-209ENST00000558705 MBD5Q9P267 1494 aa22.11■■□□□ 1.13
PKNOX2-209ENST00000558705 A2MP01023 1474 aa22.09■■□□□ 1.13
PKNOX2-209ENST00000558705 ESF1Q9H501 851 aaKnown RBP22.08■■□□□ 1.13
PKNOX2-209ENST00000558705 NCOA2Q15596 1464 aa22.08■■□□□ 1.12
PKNOX2-209ENST00000558705 MROH2AA6NES4 1674 aa22.07■■□□□ 1.12
PKNOX2-209ENST00000558705 CNTLNQ9NXG0 1405 aa22.07■■□□□ 1.12
PKNOX2-209ENST00000558705 CLTCQ00610 1675 aaKnown RBP22.07■■□□□ 1.12
PKNOX2-209ENST00000558705 ADGBQ8N7X0 1667 aa22.05■■□□□ 1.12
PKNOX2-209ENST00000558705 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
PKNOX2-209ENST00000558705 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
PKNOX2-209ENST00000558705 CAMSAP2Q08AD1 1489 aa22.02■■□□□ 1.12
PKNOX2-209ENST00000558705 CERKQ8TCT0 537 aa22■■□□□ 1.11
PKNOX2-209ENST00000558705 GGT6Q6P531 493 aa21.99■■□□□ 1.11
PKNOX2-209ENST00000558705 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
PKNOX2-209ENST00000558705 NPATQ14207 1427 aa21.98■■□□□ 1.11
PKNOX2-209ENST00000558705 CCDC141Q6ZP82 1450 aa21.97■■□□□ 1.11
PKNOX2-209ENST00000558705 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
PKNOX2-209ENST00000558705 PTPRKQ15262 1439 aa21.95■■□□□ 1.1
PKNOX2-209ENST00000558705 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
PKNOX2-209ENST00000558705 MYO3AQ8NEV4 1616 aa21.95■■□□□ 1.1
PKNOX2-209ENST00000558705 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
PKNOX2-209ENST00000558705 DHX29Q7Z478 1369 aaKnown RBP21.94■■□□□ 1.1
PKNOX2-209ENST00000558705 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
PKNOX2-209ENST00000558705 PTPRTO14522 1441 aa21.92■■□□□ 1.1
PKNOX2-209ENST00000558705 DMRT2Q9Y5R5 561 aa21.92■■□□□ 1.1
PKNOX2-209ENST00000558705 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
PKNOX2-209ENST00000558705 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
PKNOX2-209ENST00000558705 CEP170BQ9Y4F5 1589 aaPredicted RBP21.88■■□□□ 1.09
PKNOX2-209ENST00000558705 MAP3K1Q13233 1512 aa21.87■■□□□ 1.09
PKNOX2-209ENST00000558705 KIF3BO15066 747 aa21.87■■□□□ 1.09
PKNOX2-209ENST00000558705 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
PKNOX2-209ENST00000558705 LTBP4Q8N2S1 1624 aa21.86■■□□□ 1.09
PKNOX2-209ENST00000558705 NCKAP5LQ9HCH0 1330 aa21.85■■□□□ 1.09
PKNOX2-209ENST00000558705 RSPH4AQ5TD94 716 aa21.84■■□□□ 1.09
PKNOX2-209ENST00000558705 KDM5DQ9BY66 1539 aa21.83■■□□□ 1.09
PKNOX2-209ENST00000558705 FBXO31Q5XUX0 539 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms