RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 KIF14Q15058 1648 aa30.52■■■□□ 2.48
RMDN3-206ENST00000558560 TROQ12816 1431 aaPredicted RBP30.52■■■□□ 2.48
RMDN3-206ENST00000558560 EHMT2Q96KQ7 1210 aa30.51■■■□□ 2.47
RMDN3-206ENST00000558560 CLIP1P30622 1438 aa30.5■■■□□ 2.47
RMDN3-206ENST00000558560 YEATS2Q9ULM3 1422 aa30.47■■■□□ 2.47
RMDN3-206ENST00000558560 RIMS1Q86UR5 1692 aaKnown RBP30.47■■■□□ 2.47
RMDN3-206ENST00000558560 LRRIQ1Q96JM4 1722 aa30.46■■■□□ 2.47
RMDN3-206ENST00000558560 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
RMDN3-206ENST00000558560 CCDC18Q5T9S5 1454 aa30.43■■■□□ 2.46
RMDN3-206ENST00000558560 CASKIN1Q8WXD9 1431 aa30.42■■■□□ 2.46
RMDN3-206ENST00000558560 ATP10AO60312 1499 aa30.41■■■□□ 2.46
RMDN3-206ENST00000558560 SIGLEC1Q9BZZ2 1709 aa30.41■■■□□ 2.46
RMDN3-206ENST00000558560 ZNF518AQ6AHZ1 1483 aa30.4■■■□□ 2.46
RMDN3-206ENST00000558560 LMTK3Q96Q04 1460 aa30.38■■■□□ 2.45
RMDN3-206ENST00000558560 ARHGAP5Q13017 1502 aa30.37■■■□□ 2.45
RMDN3-206ENST00000558560 C9orf84Q5VXU9 1444 aa30.37■■■□□ 2.45
RMDN3-206ENST00000558560 KDM5CP41229 1560 aa30.36■■■□□ 2.45
RMDN3-206ENST00000558560 FER1L4A9Z1Z3 1794 aa30.36■■■□□ 2.45
RMDN3-206ENST00000558560 CDC42BPBQ9Y5S2 1711 aa30.35■■■□□ 2.45
RMDN3-206ENST00000558560 ARHGEF12Q9NZN5 1544 aa30.31■■■□□ 2.44
RMDN3-206ENST00000558560 PREX2Q70Z35 1606 aa30.3■■■□□ 2.44
RMDN3-206ENST00000558560 FYCO1Q9BQS8 1478 aa30.3■■■□□ 2.44
RMDN3-206ENST00000558560 REREQ9P2R6 1566 aa30.28■■■□□ 2.44
RMDN3-206ENST00000558560 MLH3Q9UHC1 1453 aa30.26■■■□□ 2.44
RMDN3-206ENST00000558560 AFAP1Q8N556 730 aa30.25■■■□□ 2.43
RMDN3-206ENST00000558560 MLECQ14165 292 aa30.23■■■□□ 2.43
RMDN3-206ENST00000558560 SETD1BQ9UPS6 1966 aaKnown RBP30.22■■■□□ 2.43
RMDN3-206ENST00000558560 CDC42BPAQ5VT25 1732 aa30.22■■■□□ 2.43
RMDN3-206ENST00000558560 ABCC1P33527 1531 aa30.22■■■□□ 2.43
RMDN3-206ENST00000558560 DIP2CQ9Y2E4 1556 aa30.2■■■□□ 2.43
RMDN3-206ENST00000558560 FBXO41Q8TF61 875 aa30.2■■■□□ 2.43
RMDN3-206ENST00000558560 ITSN2Q9NZM3 1697 aa30.19■■■□□ 2.42
RMDN3-206ENST00000558560 AGLP35573 1532 aa30.16■■■□□ 2.42
RMDN3-206ENST00000558560 PREX1Q8TCU6 1659 aa30.14■■■□□ 2.42
RMDN3-206ENST00000558560 MYT1LQ9UL68 1186 aa30.14■■■□□ 2.42
RMDN3-206ENST00000558560 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
RMDN3-206ENST00000558560 ABCA6Q8N139 1617 aa30.13■■■□□ 2.41
RMDN3-206ENST00000558560 HSPA2P54652 639 aa30.1■■■□□ 2.41
RMDN3-206ENST00000558560 PLPPR3Q6T4P5 718 aa30.1■■■□□ 2.41
RMDN3-206ENST00000558560 KIDINS220Q9ULH0 1771 aa30.1■■■□□ 2.41
RMDN3-206ENST00000558560 GPATCH8Q9UKJ3 1502 aaKnown RBP30.07■■■□□ 2.4
RMDN3-206ENST00000558560 PLEKHH2Q8IVE3 1493 aa30.04■■■□□ 2.4
RMDN3-206ENST00000558560 SAMD9LQ8IVG5 1584 aa30.03■■■□□ 2.4
RMDN3-206ENST00000558560 KIAA1107Q9UPP5 1409 aa30.03■■■□□ 2.4
RMDN3-206ENST00000558560 CEBPAP49715 358 aaPredicted RBP30.01■■■□□ 2.39
RMDN3-206ENST00000558560 CNTLNQ9NXG0 1405 aa29.99■■■□□ 2.39
RMDN3-206ENST00000558560 C3P01024 1663 aa29.98■■■□□ 2.39
RMDN3-206ENST00000558560 UHRF1BP1Q6BDS2 1440 aa29.98■■■□□ 2.39
RMDN3-206ENST00000558560 ESF1Q9H501 851 aaKnown RBP29.98■■■□□ 2.39
RMDN3-206ENST00000558560 SYCP2Q9BX26 1530 aa29.97■■■□□ 2.39
RMDN3-206ENST00000558560 MTUS2Q5JR59 1369 aa29.97■■■□□ 2.39
RMDN3-206ENST00000558560 CCNB3Q8WWL7 1395 aa29.96■■■□□ 2.39
RMDN3-206ENST00000558560 CFDP1Q9UEE9 299 aaPredicted RBP29.96■■■□□ 2.39
RMDN3-206ENST00000558560 ZNF777Q9ULD5 760 aaPredicted RBP29.96■■■□□ 2.39
RMDN3-206ENST00000558560 DMRT2Q9Y5R5 561 aa29.96■■■□□ 2.39
RMDN3-206ENST00000558560 SPAG9O60271 1321 aaKnown RBP29.96■■■□□ 2.39
RMDN3-206ENST00000558560 MROH2AA6NES4 1674 aa29.91■■■□□ 2.38
RMDN3-206ENST00000558560 HNRNPMP52272 730 aaKnown RBP eCLIP29.91■■■□□ 2.388e-6■■■■□ 19.5
RMDN3-206ENST00000558560 STRCQ7RTU9 1775 aa29.9■■■□□ 2.38
RMDN3-206ENST00000558560 ATP7AQ04656 1500 aa29.9■■■□□ 2.38
RMDN3-206ENST00000558560 EHBP1L1Q8N3D4 1523 aa29.89■■■□□ 2.38
RMDN3-206ENST00000558560 INO80Q9ULG1 1556 aaPredicted RBP29.89■■■□□ 2.38
RMDN3-206ENST00000558560 CERKQ8TCT0 537 aa29.86■■■□□ 2.37
RMDN3-206ENST00000558560 PLXNC1O60486 1568 aa29.85■■■□□ 2.37
RMDN3-206ENST00000558560 NPATQ14207 1427 aa29.84■■■□□ 2.37
RMDN3-206ENST00000558560 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
RMDN3-206ENST00000558560 SUPT6HQ7KZ85 1726 aaKnown RBP29.84■■■□□ 2.37
RMDN3-206ENST00000558560 TIAM1Q13009 1591 aa29.83■■■□□ 2.37
RMDN3-206ENST00000558560 A2MP01023 1474 aa29.82■■■□□ 2.36
RMDN3-206ENST00000558560 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
RMDN3-206ENST00000558560 PPP6R1Q9UPN7 881 aa29.8■■■□□ 2.36
RMDN3-206ENST00000558560 PTPRTO14522 1441 aa29.79■■■□□ 2.36
RMDN3-206ENST00000558560 ZMYM3Q14202 1370 aa29.78■■■□□ 2.36
RMDN3-206ENST00000558560 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
RMDN3-206ENST00000558560 MBD5Q9P267 1494 aa29.77■■■□□ 2.36
RMDN3-206ENST00000558560 RSPH4AQ5TD94 716 aa29.72■■■□□ 2.35
RMDN3-206ENST00000558560 CLTCQ00610 1675 aaKnown RBP29.72■■■□□ 2.35
RMDN3-206ENST00000558560 NCOA1Q15788 1441 aa29.7■■■□□ 2.34
RMDN3-206ENST00000558560 ZNF644Q9H582 1327 aaPredicted RBP29.7■■■□□ 2.34
RMDN3-206ENST00000558560 NCOA2Q15596 1464 aa29.66■■■□□ 2.34
RMDN3-206ENST00000558560 DHX29Q7Z478 1369 aaKnown RBP29.64■■■□□ 2.34
RMDN3-206ENST00000558560 ZNF142P52746 1687 aaPredicted RBP29.64■■■□□ 2.34
RMDN3-206ENST00000558560 GGT6Q6P531 493 aa29.64■■■□□ 2.34
RMDN3-206ENST00000558560 PTPRKQ15262 1439 aa29.63■■■□□ 2.33
RMDN3-206ENST00000558560 CCDC141Q6ZP82 1450 aa29.63■■■□□ 2.33
RMDN3-206ENST00000558560 FAM135AQ9P2D6 1515 aa29.62■■■□□ 2.33
RMDN3-206ENST00000558560 CAMSAP1Q5T5Y3 1602 aa29.61■■■□□ 2.33
RMDN3-206ENST00000558560 CAMSAP2Q08AD1 1489 aa29.6■■■□□ 2.33
RMDN3-206ENST00000558560 MYO3AQ8NEV4 1616 aa29.59■■■□□ 2.33
RMDN3-206ENST00000558560 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
RMDN3-206ENST00000558560 PLA2R1Q13018 1463 aa29.58■■■□□ 2.33
RMDN3-206ENST00000558560 IQSEC2Q5JU85 1478 aa29.58■■■□□ 2.33
RMDN3-206ENST00000558560 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
RMDN3-206ENST00000558560 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
RMDN3-206ENST00000558560 PKD2Q13563 968 aa29.55■■■□□ 2.32
RMDN3-206ENST00000558560 LTBP4Q8N2S1 1624 aa29.55■■■□□ 2.32
RMDN3-206ENST00000558560 CEP170BQ9Y4F5 1589 aaPredicted RBP29.55■■■□□ 2.32
RMDN3-206ENST00000558560 LRRC9Q6ZRR7 1453 aa29.53■■■□□ 2.32
RMDN3-206ENST00000558560 TSPY4P0CV99 314 aa29.5■■■□□ 2.31
RMDN3-206ENST00000558560 TSPY10P0CW01 314 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms