RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
IDH3A-205ENST00000558509 ILDR1Q86SU0 546 aaPredicted RBP24.61■■□□□ 1.53
IDH3A-205ENST00000558509 SCAPERQ9BY12 1400 aa24.6■■□□□ 1.53
IDH3A-205ENST00000558509 ARID4BQ4LE39 1312 aaPredicted RBP24.6■■□□□ 1.53
IDH3A-205ENST00000558509 TROQ12816 1431 aaPredicted RBP24.59■■□□□ 1.53
IDH3A-205ENST00000558509 CDC42BPBQ9Y5S2 1711 aa24.58■■□□□ 1.53
IDH3A-205ENST00000558509 FER1L4A9Z1Z3 1794 aa24.54■■□□□ 1.52
IDH3A-205ENST00000558509 MAGI2Q86UL8 1455 aa24.53■■□□□ 1.52
IDH3A-205ENST00000558509 LMTK3Q96Q04 1460 aa24.53■■□□□ 1.52
IDH3A-205ENST00000558509 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
IDH3A-205ENST00000558509 ARHGAP5Q13017 1502 aa24.51■■□□□ 1.51
IDH3A-205ENST00000558509 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
IDH3A-205ENST00000558509 KDM5CP41229 1560 aa24.5■■□□□ 1.51
IDH3A-205ENST00000558509 CDC42BPAQ5VT25 1732 aa24.48■■□□□ 1.51
IDH3A-205ENST00000558509 CLIP1P30622 1438 aa24.46■■□□□ 1.51
IDH3A-205ENST00000558509 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 ITSN2Q9NZM3 1697 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 ABCA6Q8N139 1617 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 DIP2CQ9Y2E4 1556 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 ATP10AO60312 1499 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.5
IDH3A-205ENST00000558509 CDK11AQ9UQ88 783 aaPredicted RBP24.44■■□□□ 1.5
IDH3A-205ENST00000558509 ABCC1P33527 1531 aa24.44■■□□□ 1.5
IDH3A-205ENST00000558509 MLECQ14165 292 aa24.43■■□□□ 1.5
IDH3A-205ENST00000558509 ZNF518AQ6AHZ1 1483 aa24.43■■□□□ 1.5
IDH3A-205ENST00000558509 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
IDH3A-205ENST00000558509 FYCO1Q9BQS8 1478 aa24.42■■□□□ 1.5
IDH3A-205ENST00000558509 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
IDH3A-205ENST00000558509 AFAP1Q8N556 730 aa24.39■■□□□ 1.49
IDH3A-205ENST00000558509 TRAPPC8Q9Y2L5 1435 aa24.38■■□□□ 1.49
IDH3A-205ENST00000558509 KIDINS220Q9ULH0 1771 aa24.36■■□□□ 1.49
IDH3A-205ENST00000558509 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
IDH3A-205ENST00000558509 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
IDH3A-205ENST00000558509 HSPA2P54652 639 aa24.34■■□□□ 1.49
IDH3A-205ENST00000558509 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
IDH3A-205ENST00000558509 PREX1Q8TCU6 1659 aa24.3■■□□□ 1.48
IDH3A-205ENST00000558509 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
IDH3A-205ENST00000558509 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
IDH3A-205ENST00000558509 C3P01024 1663 aa24.27■■□□□ 1.48
IDH3A-205ENST00000558509 CEBPAP49715 358 aaPredicted RBP24.26■■□□□ 1.47
IDH3A-205ENST00000558509 AGLP35573 1532 aa24.24■■□□□ 1.47
IDH3A-205ENST00000558509 STRCQ7RTU9 1775 aa24.2■■□□□ 1.46
IDH3A-205ENST00000558509 MYT1LQ9UL68 1186 aa24.19■■□□□ 1.46
IDH3A-205ENST00000558509 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
IDH3A-205ENST00000558509 INO80Q9ULG1 1556 aaPredicted RBP24.19■■□□□ 1.46
IDH3A-205ENST00000558509 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
IDH3A-205ENST00000558509 SUPT6HQ7KZ85 1726 aaKnown RBP24.17■■□□□ 1.46
IDH3A-205ENST00000558509 FBXO41Q8TF61 875 aa24.15■■□□□ 1.46
IDH3A-205ENST00000558509 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
IDH3A-205ENST00000558509 CEP162Q5TB80 1403 aa24.14■■□□□ 1.45
IDH3A-205ENST00000558509 PLXNC1O60486 1568 aa24.13■■□□□ 1.45
IDH3A-205ENST00000558509 HNRNPMP52272 730 aaKnown RBP eCLIP24.13■■□□□ 1.45
IDH3A-205ENST00000558509 EHBP1L1Q8N3D4 1523 aa24.12■■□□□ 1.45
IDH3A-205ENST00000558509 SETD1BQ9UPS6 1966 aaKnown RBP24.11■■□□□ 1.45
IDH3A-205ENST00000558509 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
IDH3A-205ENST00000558509 CCNB3Q8WWL7 1395 aa24.09■■□□□ 1.45
IDH3A-205ENST00000558509 MROH2AA6NES4 1674 aa24.08■■□□□ 1.45
IDH3A-205ENST00000558509 UHRF1BP1Q6BDS2 1440 aa24.08■■□□□ 1.44
IDH3A-205ENST00000558509 KIAA1107Q9UPP5 1409 aa24.08■■□□□ 1.44
IDH3A-205ENST00000558509 CLTCQ00610 1675 aaKnown RBP24.07■■□□□ 1.44
IDH3A-205ENST00000558509 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
IDH3A-205ENST00000558509 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
IDH3A-205ENST00000558509 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
IDH3A-205ENST00000558509 PLEKHH2Q8IVE3 1493 aa24.05■■□□□ 1.44
IDH3A-205ENST00000558509 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
IDH3A-205ENST00000558509 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
IDH3A-205ENST00000558509 A2MP01023 1474 aa24.02■■□□□ 1.44
IDH3A-205ENST00000558509 CNTLNQ9NXG0 1405 aa23.99■■□□□ 1.43
IDH3A-205ENST00000558509 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
IDH3A-205ENST00000558509 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.43
IDH3A-205ENST00000558509 CERKQ8TCT0 537 aa23.95■■□□□ 1.42
IDH3A-205ENST00000558509 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
IDH3A-205ENST00000558509 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
IDH3A-205ENST00000558509 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
IDH3A-205ENST00000558509 ESF1Q9H501 851 aaKnown RBP23.92■■□□□ 1.42
IDH3A-205ENST00000558509 NPATQ14207 1427 aa23.92■■□□□ 1.42
IDH3A-205ENST00000558509 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
IDH3A-205ENST00000558509 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
IDH3A-205ENST00000558509 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
IDH3A-205ENST00000558509 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
IDH3A-205ENST00000558509 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
IDH3A-205ENST00000558509 PTPRTO14522 1441 aa23.87■■□□□ 1.41
IDH3A-205ENST00000558509 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
IDH3A-205ENST00000558509 LTBP4Q8N2S1 1624 aa23.87■■□□□ 1.41
IDH3A-205ENST00000558509 RTEL1-TNFRSF6BF6WH68 1400 aa23.86■■□□□ 1.41
IDH3A-205ENST00000558509 CEP170BQ9Y4F5 1589 aaPredicted RBP23.86■■□□□ 1.41
IDH3A-205ENST00000558509 GGT6Q6P531 493 aa23.85■■□□□ 1.41
IDH3A-205ENST00000558509 ARHGEF5Q12774 1597 aa23.84■■□□□ 1.41
IDH3A-205ENST00000558509 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
IDH3A-205ENST00000558509 DHX29Q7Z478 1369 aaKnown RBP23.81■■□□□ 1.4
IDH3A-205ENST00000558509 DMRT2Q9Y5R5 561 aa23.79■■□□□ 1.4
IDH3A-205ENST00000558509 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
IDH3A-205ENST00000558509 NCKAP5LQ9HCH0 1330 aa23.76■■□□□ 1.39
IDH3A-205ENST00000558509 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
IDH3A-205ENST00000558509 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
IDH3A-205ENST00000558509 TCOF1Q13428 1488 aaKnown RBP23.75■■□□□ 1.39
IDH3A-205ENST00000558509 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
IDH3A-205ENST00000558509 PLA2R1Q13018 1463 aa23.74■■□□□ 1.39
IDH3A-205ENST00000558509 MAP3K1Q13233 1512 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms