RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ARHGAP5Q13017 1502 aa16.38■□□□□ 0.21
TPM1-212ENST00000558347 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
TPM1-212ENST00000558347 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
TPM1-212ENST00000558347 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
TPM1-212ENST00000558347 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
TPM1-212ENST00000558347 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
TPM1-212ENST00000558347 ZFYVE16Q7Z3T8 1539 aa16.35■□□□□ 0.21
TPM1-212ENST00000558347 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
TPM1-212ENST00000558347 BCORL1Q5H9F3 1711 aa16.35■□□□□ 0.21
TPM1-212ENST00000558347 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
TPM1-212ENST00000558347 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
TPM1-212ENST00000558347 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.21
TPM1-212ENST00000558347 ARID4BQ4LE39 1312 aaPredicted RBP16.32■□□□□ 0.2
TPM1-212ENST00000558347 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
TPM1-212ENST00000558347 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
TPM1-212ENST00000558347 KDM5CP41229 1560 aa16.3■□□□□ 0.2
TPM1-212ENST00000558347 ABCC1P33527 1531 aa16.29■□□□□ 0.2
TPM1-212ENST00000558347 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
TPM1-212ENST00000558347 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
TPM1-212ENST00000558347 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
TPM1-212ENST00000558347 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
TPM1-212ENST00000558347 PTPRMP28827 1452 aa16.28■□□□□ 0.2
TPM1-212ENST00000558347 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
TPM1-212ENST00000558347 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
TPM1-212ENST00000558347 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
TPM1-212ENST00000558347 HECW2Q9P2P5 1572 aa16.26■□□□□ 0.19
TPM1-212ENST00000558347 ATP10AO60312 1499 aa16.25■□□□□ 0.19
TPM1-212ENST00000558347 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
TPM1-212ENST00000558347 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
TPM1-212ENST00000558347 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
TPM1-212ENST00000558347 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
TPM1-212ENST00000558347 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
TPM1-212ENST00000558347 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
TPM1-212ENST00000558347 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
TPM1-212ENST00000558347 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
TPM1-212ENST00000558347 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
TPM1-212ENST00000558347 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
TPM1-212ENST00000558347 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
TPM1-212ENST00000558347 MLECQ14165 292 aa16.2■□□□□ 0.18
TPM1-212ENST00000558347 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
TPM1-212ENST00000558347 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
TPM1-212ENST00000558347 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
TPM1-212ENST00000558347 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
TPM1-212ENST00000558347 REREQ9P2R6 1566 aa16.18■□□□□ 0.18
TPM1-212ENST00000558347 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
TPM1-212ENST00000558347 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
TPM1-212ENST00000558347 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
TPM1-212ENST00000558347 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
TPM1-212ENST00000558347 PLEKHH2Q8IVE3 1493 aa16.15■□□□□ 0.18
TPM1-212ENST00000558347 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
TPM1-212ENST00000558347 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
TPM1-212ENST00000558347 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
TPM1-212ENST00000558347 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
TPM1-212ENST00000558347 AGLP35573 1532 aa16.12■□□□□ 0.17
TPM1-212ENST00000558347 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
TPM1-212ENST00000558347 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
TPM1-212ENST00000558347 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
TPM1-212ENST00000558347 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
TPM1-212ENST00000558347 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
TPM1-212ENST00000558347 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
TPM1-212ENST00000558347 CAMSAP2Q08AD1 1489 aa16.07■□□□□ 0.16
TPM1-212ENST00000558347 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
TPM1-212ENST00000558347 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
TPM1-212ENST00000558347 A2MP01023 1474 aa16.04■□□□□ 0.16
TPM1-212ENST00000558347 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
TPM1-212ENST00000558347 C3P01024 1663 aa16.02■□□□□ 0.16
TPM1-212ENST00000558347 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
TPM1-212ENST00000558347 HRCP23327 699 aa16.02■□□□□ 0.15
TPM1-212ENST00000558347 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
TPM1-212ENST00000558347 HSPA2P54652 639 aa16.01■□□□□ 0.15
TPM1-212ENST00000558347 PREX1Q8TCU6 1659 aa16.01■□□□□ 0.15
TPM1-212ENST00000558347 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
TPM1-212ENST00000558347 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
TPM1-212ENST00000558347 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
TPM1-212ENST00000558347 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
TPM1-212ENST00000558347 APLP2Q06481 763 aa15.97■□□□□ 0.15
TPM1-212ENST00000558347 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
TPM1-212ENST00000558347 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
TPM1-212ENST00000558347 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
TPM1-212ENST00000558347 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
TPM1-212ENST00000558347 CLTCQ00610 1675 aaKnown RBP15.96■□□□□ 0.15
TPM1-212ENST00000558347 GGT6Q6P531 493 aa15.94■□□□□ 0.14
TPM1-212ENST00000558347 SETD1BQ9UPS6 1966 aaKnown RBP15.94■□□□□ 0.14
TPM1-212ENST00000558347 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
TPM1-212ENST00000558347 TSPY4P0CV99 314 aa15.93■□□□□ 0.14
TPM1-212ENST00000558347 TSPY10P0CW01 314 aa15.93■□□□□ 0.14
TPM1-212ENST00000558347 MAST1Q9Y2H9 1570 aa15.93■□□□□ 0.14
TPM1-212ENST00000558347 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
TPM1-212ENST00000558347 PTPN23Q9H3S7 1636 aa15.91■□□□□ 0.14
TPM1-212ENST00000558347 KIF3BO15066 747 aa15.89■□□□□ 0.13
TPM1-212ENST00000558347 NPATQ14207 1427 aa15.88■□□□□ 0.13
TPM1-212ENST00000558347 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
TPM1-212ENST00000558347 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
TPM1-212ENST00000558347 FGD6Q6ZV73 1430 aa15.87■□□□□ 0.13
TPM1-212ENST00000558347 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
TPM1-212ENST00000558347 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
TPM1-212ENST00000558347 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
TPM1-212ENST00000558347 PTPRKQ15262 1439 aa15.87■□□□□ 0.13
TPM1-212ENST00000558347 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
TPM1-212ENST00000558347 ABCC5O15440 1437 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms