RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PMFBP1Q8TBY8 1022 aa14.79□□□□□ -0.04
CSPG4P12-201ENST00000558282 PDE3BQ13370 1112 aa14.79□□□□□ -0.04
CSPG4P12-201ENST00000558282 PDE4AP27815 886 aa14.78□□□□□ -0.04
CSPG4P12-201ENST00000558282 TPM4P67936 248 aa14.78□□□□□ -0.04
CSPG4P12-201ENST00000558282 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
CSPG4P12-201ENST00000558282 FAM13BQ9NYF5 915 aa14.78□□□□□ -0.04
CSPG4P12-201ENST00000558282 FGD1P98174 961 aa14.78□□□□□ -0.04
CSPG4P12-201ENST00000558282 GPS2Q13227 327 aa14.77□□□□□ -0.04
CSPG4P12-201ENST00000558282 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.04
CSPG4P12-201ENST00000558282 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
CSPG4P12-201ENST00000558282 TEX35Q5T0J7 233 aa14.77□□□□□ -0.05
CSPG4P12-201ENST00000558282 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
CSPG4P12-201ENST00000558282 KCNJ4P48050 445 aa14.76□□□□□ -0.05
CSPG4P12-201ENST00000558282 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
CSPG4P12-201ENST00000558282 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
CSPG4P12-201ENST00000558282 RRP7BPQ9NSQ0 103 aa14.75□□□□□ -0.05
CSPG4P12-201ENST00000558282 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-201ENST00000558282 CCDC66A2RUB6 948 aa14.74□□□□□ -0.05
CSPG4P12-201ENST00000558282 NOM1Q5C9Z4 860 aaKnown RBP14.73□□□□□ -0.05
CSPG4P12-201ENST00000558282 RRP9O43818 475 aaKnown RBP14.73□□□□□ -0.05
CSPG4P12-201ENST00000558282 APPP05067 770 aa14.73□□□□□ -0.05
CSPG4P12-201ENST00000558282 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P12-201ENST00000558282 IPO8O15397 1037 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-201ENST00000558282 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-201ENST00000558282 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
CSPG4P12-201ENST00000558282 RALBP1Q15311 655 aa14.71□□□□□ -0.05
CSPG4P12-201ENST00000558282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSPG4P12-201ENST00000558282 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
CSPG4P12-201ENST00000558282 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P12-201ENST00000558282 CCNB3Q8WWL7 1395 aa14.7□□□□□ -0.06
CSPG4P12-201ENST00000558282 DDX49Q9Y6V7 483 aaKnown RBP14.7□□□□□ -0.06
CSPG4P12-201ENST00000558282 MRE11P49959 708 aa14.69□□□□□ -0.06
CSPG4P12-201ENST00000558282 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
CSPG4P12-201ENST00000558282 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-201ENST00000558282 KTN1Q86UP2 1357 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-201ENST00000558282 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
CSPG4P12-201ENST00000558282 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
CSPG4P12-201ENST00000558282 HSPA5P11021 654 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-201ENST00000558282 KIAA1211Q6ZU35 1233 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 UBE2Q2Q8WVN8 375 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 CHMP5Q9NZZ3 219 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 TMF1P82094 1093 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 FBLN2P98095 1184 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 ST18O60284 1047 aa14.65□□□□□ -0.06
CSPG4P12-201ENST00000558282 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
CSPG4P12-201ENST00000558282 DIAPH3Q9NSV4 1193 aa14.64□□□□□ -0.07
CSPG4P12-201ENST00000558282 CCDC34Q96HJ3 373 aa14.64□□□□□ -0.07
CSPG4P12-201ENST00000558282 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
CSPG4P12-201ENST00000558282 OS9Q13438 667 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P12-201ENST00000558282 CWC15Q9P013 229 aaKnown RBP14.63□□□□□ -0.07
CSPG4P12-201ENST00000558282 SETD5Q9C0A6 1442 aa14.63□□□□□ -0.07
CSPG4P12-201ENST00000558282 TAF3Q5VWG9 929 aa14.62□□□□□ -0.07
CSPG4P12-201ENST00000558282 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
CSPG4P12-201ENST00000558282 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
CSPG4P12-201ENST00000558282 TPM3P06753 285 aa14.61□□□□□ -0.07
CSPG4P12-201ENST00000558282 HMGN5P82970 282 aaKnown RBP14.61□□□□□ -0.07
CSPG4P12-201ENST00000558282 ISY1Q9ULR0 285 aaKnown RBP14.61□□□□□ -0.07
CSPG4P12-201ENST00000558282 ARGLU1Q9NWB6 273 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-201ENST00000558282 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P12-201ENST00000558282 IL27Q8NEV9 243 aa14.6□□□□□ -0.07
CSPG4P12-201ENST00000558282 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
CSPG4P12-201ENST00000558282 SLC4A3P48751 1232 aa14.58□□□□□ -0.08
CSPG4P12-201ENST00000558282 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.08
CSPG4P12-201ENST00000558282 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
CSPG4P12-201ENST00000558282 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
CSPG4P12-201ENST00000558282 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
CSPG4P12-201ENST00000558282 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
CSPG4P12-201ENST00000558282 R3HCC1Q9Y3T6 440 aaKnown RBP14.57□□□□□ -0.08
CSPG4P12-201ENST00000558282 BRPF3Q9ULD4 1205 aa14.57□□□□□ -0.08
CSPG4P12-201ENST00000558282 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P12-201ENST00000558282 GNL2Q13823 731 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-201ENST00000558282 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
CSPG4P12-201ENST00000558282 GOLGA6L19H0YKK7 550 aa14.55□□□□□ -0.08
CSPG4P12-201ENST00000558282 RRP1P56182 461 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-201ENST00000558282 ACBD3Q9H3P7 528 aa14.55□□□□□ -0.08
CSPG4P12-201ENST00000558282 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-201ENST00000558282 ITPRIPQ8IWB1 547 aa14.54□□□□□ -0.08
CSPG4P12-201ENST00000558282 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
CSPG4P12-201ENST00000558282 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
CSPG4P12-201ENST00000558282 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.08
CSPG4P12-201ENST00000558282 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P12-201ENST00000558282 CCDC173Q0VFZ6 552 aa14.52□□□□□ -0.09
CSPG4P12-201ENST00000558282 NUCB2P80303 420 aa14.51□□□□□ -0.09
CSPG4P12-201ENST00000558282 CGNL1Q0VF96 1302 aa14.51□□□□□ -0.09
CSPG4P12-201ENST00000558282 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P12-201ENST00000558282 BECN2A8MW95 431 aa14.5□□□□□ -0.09
CSPG4P12-201ENST00000558282 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
CSPG4P12-201ENST00000558282 HMMRO75330 724 aa14.49□□□□□ -0.09
CSPG4P12-201ENST00000558282 ZNF592Q92610 1267 aa14.49□□□□□ -0.09
CSPG4P12-201ENST00000558282 EXOC6Q8TAG9 804 aa14.49□□□□□ -0.09
CSPG4P12-201ENST00000558282 CHMP4CQ96CF2 233 aa14.48□□□□□ -0.09
CSPG4P12-201ENST00000558282 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
CSPG4P12-201ENST00000558282 HSP90B2PQ58FF3 399 aa14.48□□□□□ -0.09
CSPG4P12-201ENST00000558282 WIZO95785 1651 aa14.48□□□□□ -0.09
CSPG4P12-201ENST00000558282 TSPYL1Q9H0U9 437 aa14.48□□□□□ -0.09
CSPG4P12-201ENST00000558282 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
CSPG4P12-201ENST00000558282 FHAD1B1AJZ9 1412 aa14.47□□□□□ -0.09
CSPG4P12-201ENST00000558282 CCAR2Q8N163 923 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms