RNA–Protein interactions for RNA: ENST00000558276.7

PBX4-204, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-204ENST00000558276 SCAPERQ9BY12 1400 aa34.23■■■■□ 3.07
PBX4-204ENST00000558276 MAGI2Q86UL8 1455 aa34.22■■■■□ 3.07
PBX4-204ENST00000558276 LRRIQ1Q96JM4 1722 aa34.22■■■■□ 3.07
PBX4-204ENST00000558276 ILDR1Q86SU0 546 aaPredicted RBP34.21■■■■□ 3.07
PBX4-204ENST00000558276 TROQ12816 1431 aaPredicted RBP34.2■■■■□ 3.06
PBX4-204ENST00000558276 EFCAB2Q5VUJ9 269 aa34.19■■■■□ 3.06
PBX4-204ENST00000558276 YEATS2Q9ULM3 1422 aa34.19■■■■□ 3.06
PBX4-204ENST00000558276 ARHGAP5Q13017 1502 aa34.16■■■■□ 3.06
PBX4-204ENST00000558276 PCF11O94913 1555 aaKnown RBP34.14■■■■□ 3.06
PBX4-204ENST00000558276 SIGLEC1Q9BZZ2 1709 aa34.11■■■■□ 3.05
PBX4-204ENST00000558276 CCDC18Q5T9S5 1454 aa34.11■■■■□ 3.05
PBX4-204ENST00000558276 FER1L4A9Z1Z3 1794 aa34.1■■■■□ 3.05
PBX4-204ENST00000558276 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.04
PBX4-204ENST00000558276 PLPPR3Q6T4P5 718 aa34.07■■■■□ 3.04
PBX4-204ENST00000558276 ZNF518AQ6AHZ1 1483 aa34.07■■■■□ 3.04
PBX4-204ENST00000558276 MLECQ14165 292 aa34.06■■■■□ 3.04
PBX4-204ENST00000558276 CDC42BPBQ9Y5S2 1711 aa34.04■■■■□ 3.04
PBX4-204ENST00000558276 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
PBX4-204ENST00000558276 ATP10AO60312 1499 aa34.03■■■■□ 3.04
PBX4-204ENST00000558276 MYT1LQ9UL68 1186 aa34.02■■■■□ 3.04
PBX4-204ENST00000558276 PREX2Q70Z35 1606 aa34.01■■■■□ 3.04
PBX4-204ENST00000558276 LMTK3Q96Q04 1460 aa34■■■■□ 3.03
PBX4-204ENST00000558276 FYCO1Q9BQS8 1478 aa33.98■■■■□ 3.03
PBX4-204ENST00000558276 KDM5CP41229 1560 aa33.98■■■■□ 3.03
PBX4-204ENST00000558276 AFAP1Q8N556 730 aa33.92■■■■□ 3.02
PBX4-204ENST00000558276 CDC42BPAQ5VT25 1732 aa33.91■■■■□ 3.02
PBX4-204ENST00000558276 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
PBX4-204ENST00000558276 ARHGEF12Q9NZN5 1544 aa33.9■■■■□ 3.02
PBX4-204ENST00000558276 ABCC1P33527 1531 aa33.89■■■■□ 3.02
PBX4-204ENST00000558276 DIP2CQ9Y2E4 1556 aa33.87■■■■□ 3.01
PBX4-204ENST00000558276 ABCA6Q8N139 1617 aa33.84■■■■□ 3.01
PBX4-204ENST00000558276 HSPA2P54652 639 aa33.82■■■■□ 3
PBX4-204ENST00000558276 MLH3Q9UHC1 1453 aa33.82■■■■□ 3
PBX4-204ENST00000558276 REREQ9P2R6 1566 aa33.81■■■■□ 3
PBX4-204ENST00000558276 PREX1Q8TCU6 1659 aa33.8■■■■□ 3
PBX4-204ENST00000558276 TRAPPC8Q9Y2L5 1435 aa33.79■■■■□ 3
PBX4-204ENST00000558276 ZNF777Q9ULD5 760 aaPredicted RBP33.76■■■□□ 2.99
PBX4-204ENST00000558276 FBXO41Q8TF61 875 aa33.74■■■□□ 2.99
PBX4-204ENST00000558276 KIDINS220Q9ULH0 1771 aa33.73■■■□□ 2.99
PBX4-204ENST00000558276 ESF1Q9H501 851 aaKnown RBP33.71■■■□□ 2.99
PBX4-204ENST00000558276 SAMD9LQ8IVG5 1584 aa33.71■■■□□ 2.99
PBX4-204ENST00000558276 CEBPAP49715 358 aaPredicted RBP33.7■■■□□ 2.99
PBX4-204ENST00000558276 SYCP2Q9BX26 1530 aa33.69■■■□□ 2.98
PBX4-204ENST00000558276 AGLP35573 1532 aa33.69■■■□□ 2.98
PBX4-204ENST00000558276 MTUS2Q5JR59 1369 aa33.68■■■□□ 2.98
PBX4-204ENST00000558276 GPATCH8Q9UKJ3 1502 aaKnown RBP33.68■■■□□ 2.98
PBX4-204ENST00000558276 SETD1BQ9UPS6 1966 aaKnown RBP33.67■■■□□ 2.98
PBX4-204ENST00000558276 CCNB3Q8WWL7 1395 aa33.64■■■□□ 2.98
PBX4-204ENST00000558276 C3P01024 1663 aa33.64■■■□□ 2.98
PBX4-204ENST00000558276 UHRF1BP1Q6BDS2 1440 aa33.62■■■□□ 2.97
PBX4-204ENST00000558276 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
PBX4-204ENST00000558276 CFDP1Q9UEE9 299 aaPredicted RBP33.61■■■□□ 2.97
PBX4-204ENST00000558276 SPAG9O60271 1321 aaKnown RBP33.59■■■□□ 2.97
PBX4-204ENST00000558276 SUPT6HQ7KZ85 1726 aaKnown RBP33.57■■■□□ 2.96
PBX4-204ENST00000558276 HNRNPMP52272 730 aaKnown RBP eCLIP33.57■■■□□ 2.96
PBX4-204ENST00000558276 EHBP1L1Q8N3D4 1523 aa33.57■■■□□ 2.96
PBX4-204ENST00000558276 ATP7AQ04656 1500 aa33.55■■■□□ 2.96
PBX4-204ENST00000558276 CEP162Q5TB80 1403 aa33.54■■■□□ 2.96
PBX4-204ENST00000558276 CNTLNQ9NXG0 1405 aa33.54■■■□□ 2.96
PBX4-204ENST00000558276 KIAA1107Q9UPP5 1409 aa33.54■■■□□ 2.96
PBX4-204ENST00000558276 INO80Q9ULG1 1556 aaPredicted RBP33.51■■■□□ 2.96
PBX4-204ENST00000558276 TIAM1Q13009 1591 aa33.5■■■□□ 2.95
PBX4-204ENST00000558276 MROH2AA6NES4 1674 aa33.48■■■□□ 2.95
PBX4-204ENST00000558276 STRCQ7RTU9 1775 aa33.47■■■□□ 2.95
PBX4-204ENST00000558276 DMRT2Q9Y5R5 561 aa33.46■■■□□ 2.95
PBX4-204ENST00000558276 ADGBQ8N7X0 1667 aa33.43■■■□□ 2.94
PBX4-204ENST00000558276 A2MP01023 1474 aa33.43■■■□□ 2.94
PBX4-204ENST00000558276 CERKQ8TCT0 537 aa33.41■■■□□ 2.94
PBX4-204ENST00000558276 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
PBX4-204ENST00000558276 CLTCQ00610 1675 aaKnown RBP33.4■■■□□ 2.94
PBX4-204ENST00000558276 ZNF644Q9H582 1327 aaPredicted RBP33.34■■■□□ 2.93
PBX4-204ENST00000558276 NPATQ14207 1427 aa33.34■■■□□ 2.93
PBX4-204ENST00000558276 ZMYM3Q14202 1370 aa33.33■■■□□ 2.93
PBX4-204ENST00000558276 GGT6Q6P531 493 aa33.32■■■□□ 2.92
PBX4-204ENST00000558276 NCOA2Q15596 1464 aa33.3■■■□□ 2.92
PBX4-204ENST00000558276 MBD5Q9P267 1494 aa33.3■■■□□ 2.92
PBX4-204ENST00000558276 RTEL1-TNFRSF6BF6WH68 1400 aa33.27■■■□□ 2.92
PBX4-204ENST00000558276 PTPRTO14522 1441 aa33.27■■■□□ 2.92
PBX4-204ENST00000558276 CAMSAP2Q08AD1 1489 aa33.25■■■□□ 2.91
PBX4-204ENST00000558276 CCDC141Q6ZP82 1450 aa33.25■■■□□ 2.91
PBX4-204ENST00000558276 MYO3AQ8NEV4 1616 aa33.24■■■□□ 2.91
PBX4-204ENST00000558276 CAMSAP1Q5T5Y3 1602 aa33.23■■■□□ 2.91
PBX4-204ENST00000558276 NCOA1Q15788 1441 aa33.22■■■□□ 2.91
PBX4-204ENST00000558276 PPP6R1Q9UPN7 881 aa33.21■■■□□ 2.91
PBX4-204ENST00000558276 VPS8Q8N3P4 1428 aa33.2■■■□□ 2.91
PBX4-204ENST00000558276 ZNF142P52746 1687 aaPredicted RBP33.2■■■□□ 2.91
PBX4-204ENST00000558276 RSPH4AQ5TD94 716 aa33.17■■■□□ 2.9
PBX4-204ENST00000558276 DHX29Q7Z478 1369 aaKnown RBP33.17■■■□□ 2.9
PBX4-204ENST00000558276 PTPRKQ15262 1439 aa33.15■■■□□ 2.9
PBX4-204ENST00000558276 CEP170BQ9Y4F5 1589 aaPredicted RBP33.15■■■□□ 2.9
PBX4-204ENST00000558276 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
PBX4-204ENST00000558276 LRRC9Q6ZRR7 1453 aa33.12■■■□□ 2.89
PBX4-204ENST00000558276 ARHGEF5Q12774 1597 aa33.12■■■□□ 2.89
PBX4-204ENST00000558276 KIF3BO15066 747 aa33.11■■■□□ 2.89
PBX4-204ENST00000558276 TSPY4P0CV99 314 aa33.09■■■□□ 2.89
PBX4-204ENST00000558276 TSPY10P0CW01 314 aa33.09■■■□□ 2.89
PBX4-204ENST00000558276 KDM5DQ9BY66 1539 aa33.07■■■□□ 2.88
PBX4-204ENST00000558276 PLA2R1Q13018 1463 aa33.06■■■□□ 2.88
PBX4-204ENST00000558276 FAM135AQ9P2D6 1515 aa33.06■■■□□ 2.88
PBX4-204ENST00000558276 NCKAP5LQ9HCH0 1330 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms