RNA–Protein interactions for RNA: ENST00000558146.1

SPPL2A-202, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 3

Gene SPPL2A, Length 328 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-202ENST00000558146 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
SPPL2A-202ENST00000558146 C2orf72A6NCS6 295 aa17.36■□□□□ 0.37
SPPL2A-202ENST00000558146 KIF3CO14782 793 aa17.35■□□□□ 0.37
SPPL2A-202ENST00000558146 TMC2Q8TDI7 906 aa17.33■□□□□ 0.36
SPPL2A-202ENST00000558146 ST18O60284 1047 aa17.32■□□□□ 0.36
SPPL2A-202ENST00000558146 HOXB3P14651 431 aaPredicted RBP17.31■□□□□ 0.36
SPPL2A-202ENST00000558146 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
SPPL2A-202ENST00000558146 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
SPPL2A-202ENST00000558146 DOK7Q18PE1 504 aa17.25■□□□□ 0.35
SPPL2A-202ENST00000558146 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
SPPL2A-202ENST00000558146 CRISPLD2Q9H0B8 497 aa17.21■□□□□ 0.35
SPPL2A-202ENST00000558146 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
SPPL2A-202ENST00000558146 POTEMA6NI47 508 aa17.2■□□□□ 0.34
SPPL2A-202ENST00000558146 POTEGQ6S5H5 508 aa17.2■□□□□ 0.34
SPPL2A-202ENST00000558146 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
SPPL2A-202ENST00000558146 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
SPPL2A-202ENST00000558146 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
SPPL2A-202ENST00000558146 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
SPPL2A-202ENST00000558146 DSG2Q14126 1118 aa17.16■□□□□ 0.34
SPPL2A-202ENST00000558146 FOXK1P85037 733 aa17.15■□□□□ 0.34
SPPL2A-202ENST00000558146 MARVELD3Q96A59 401 aa17.15■□□□□ 0.34
SPPL2A-202ENST00000558146 PLPP6Q8IY26 295 aa17.12■□□□□ 0.33
SPPL2A-202ENST00000558146 PDE4AP27815 886 aa17.09■□□□□ 0.33
SPPL2A-202ENST00000558146 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
SPPL2A-202ENST00000558146 HOXB1P14653 301 aaPredicted RBP17.08■□□□□ 0.32
SPPL2A-202ENST00000558146 EMP3P54852 163 aa17.08■□□□□ 0.32
SPPL2A-202ENST00000558146 PPP1R15BQ5SWA1 713 aa17.08■□□□□ 0.32
SPPL2A-202ENST00000558146 LARP6Q9BRS8 491 aaKnown RBP17.07■□□□□ 0.32
SPPL2A-202ENST00000558146 GPR153Q6NV75 609 aa17.05■□□□□ 0.32
SPPL2A-202ENST00000558146 SLC34A2O95436 690 aa17.04■□□□□ 0.32
SPPL2A-202ENST00000558146 DDX27Q96GQ7 796 aaKnown RBP17.04■□□□□ 0.32
SPPL2A-202ENST00000558146 MFSD10Q14728 455 aa17.03■□□□□ 0.32
SPPL2A-202ENST00000558146 ARSIQ5FYB1 569 aa17.03■□□□□ 0.32
SPPL2A-202ENST00000558146 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPPL2A-202ENST00000558146 PCDHGA4Q9Y5G9 962 aa17■□□□□ 0.31
SPPL2A-202ENST00000558146 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
SPPL2A-202ENST00000558146 PTCD2Q8WV60 388 aaKnown RBP16.95■□□□□ 0.3
SPPL2A-202ENST00000558146 NUDT7P0C024 238 aa16.93■□□□□ 0.3
SPPL2A-202ENST00000558146 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.3
SPPL2A-202ENST00000558146 HS3ST6Q96QI5 342 aa16.93■□□□□ 0.3
SPPL2A-202ENST00000558146 PLCB2Q00722 1185 aa16.92■□□□□ 0.3
SPPL2A-202ENST00000558146 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
SPPL2A-202ENST00000558146 ERBB3P21860 1342 aa16.91■□□□□ 0.3
SPPL2A-202ENST00000558146 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
SPPL2A-202ENST00000558146 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
SPPL2A-202ENST00000558146 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
SPPL2A-202ENST00000558146 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
SPPL2A-202ENST00000558146 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
SPPL2A-202ENST00000558146 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
SPPL2A-202ENST00000558146 ZNF316A6NFI3 1004 aaPredicted RBP16.82■□□□□ 0.28
SPPL2A-202ENST00000558146 TBC1D12O60347 775 aa16.82■□□□□ 0.28
SPPL2A-202ENST00000558146 KDM4FA0A1W2PPD8 638 aa16.8■□□□□ 0.28
SPPL2A-202ENST00000558146 LHX6Q9UPM6 363 aa16.8■□□□□ 0.28
SPPL2A-202ENST00000558146 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
SPPL2A-202ENST00000558146 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
SPPL2A-202ENST00000558146 WDR70Q9NW82 654 aa16.74■□□□□ 0.27
SPPL2A-202ENST00000558146 MAP3K9P80192 1104 aa16.72■□□□□ 0.27
SPPL2A-202ENST00000558146 DPYSL4O14531 572 aa16.69■□□□□ 0.26
SPPL2A-202ENST00000558146 EVI5O60447 810 aa16.69■□□□□ 0.26
SPPL2A-202ENST00000558146 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
SPPL2A-202ENST00000558146 E2F4Q16254 413 aa16.68■□□□□ 0.26
SPPL2A-202ENST00000558146 KRTAP3-3Q9BYR6 98 aa16.68■□□□□ 0.26
SPPL2A-202ENST00000558146 KRTAP3-2Q9BYR7 98 aa16.68■□□□□ 0.26
SPPL2A-202ENST00000558146 ZNF687Q8N1G0 1237 aa16.67■□□□□ 0.26
SPPL2A-202ENST00000558146 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
SPPL2A-202ENST00000558146 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
SPPL2A-202ENST00000558146 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
SPPL2A-202ENST00000558146 ZNF454Q8N9F8 522 aa16.59■□□□□ 0.25
SPPL2A-202ENST00000558146 FOSBP53539 338 aa16.55■□□□□ 0.24
SPPL2A-202ENST00000558146 POTEEQ6S8J3 1075 aa16.55■□□□□ 0.24
SPPL2A-202ENST00000558146 JPH4Q96JJ6 628 aa16.55■□□□□ 0.24
SPPL2A-202ENST00000558146 PDIA6Q15084 440 aa16.54■□□□□ 0.24
SPPL2A-202ENST00000558146 KCNV2Q8TDN2 545 aa16.53■□□□□ 0.24
SPPL2A-202ENST00000558146 AXIN2Q9Y2T1 843 aa16.53■□□□□ 0.24
SPPL2A-202ENST00000558146 PBX2P40425 430 aa16.52■□□□□ 0.24
SPPL2A-202ENST00000558146 ARIH1Q9Y4X5 557 aaPredicted RBP16.52■□□□□ 0.24
SPPL2A-202ENST00000558146 PLSCR2Q9NRY7 297 aa16.51■□□□□ 0.23
SPPL2A-202ENST00000558146 SPDYE16A6NNV3 312 aaPredicted RBP16.46■□□□□ 0.23
SPPL2A-202ENST00000558146 LSM11P83369 360 aaKnown RBP eCLIP16.46■□□□□ 0.23
SPPL2A-202ENST00000558146 PCDHGA10Q9Y5H3 936 aa16.46■□□□□ 0.23
SPPL2A-202ENST00000558146 KCNK17Q96T54 332 aa16.45■□□□□ 0.22
SPPL2A-202ENST00000558146 ARHGAP33O14559 1287 aa16.44■□□□□ 0.22
SPPL2A-202ENST00000558146 PSEN2P49810 448 aa16.44■□□□□ 0.22
SPPL2A-202ENST00000558146 SPNS2Q8IVW8 549 aa16.44■□□□□ 0.22
SPPL2A-202ENST00000558146 DDX12PQ92771 950 aa16.44■□□□□ 0.22
SPPL2A-202ENST00000558146 ZDHHC16Q969W1 377 aa16.44■□□□□ 0.22
SPPL2A-202ENST00000558146 PHF14O94880 888 aa16.43■□□□□ 0.22
SPPL2A-202ENST00000558146 ADAM33Q9BZ11 813 aa16.43■□□□□ 0.22
SPPL2A-202ENST00000558146 BCL2L12Q9HB09 334 aa16.43■□□□□ 0.22
SPPL2A-202ENST00000558146 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
SPPL2A-202ENST00000558146 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
SPPL2A-202ENST00000558146 PTGER2P43116 358 aa16.41■□□□□ 0.22
SPPL2A-202ENST00000558146 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
SPPL2A-202ENST00000558146 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
SPPL2A-202ENST00000558146 DMRTA1Q5VZB9 504 aa16.39■□□□□ 0.21
SPPL2A-202ENST00000558146 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
SPPL2A-202ENST00000558146 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
SPPL2A-202ENST00000558146 FBXW7Q969H0 707 aa16.37■□□□□ 0.21
SPPL2A-202ENST00000558146 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
SPPL2A-202ENST00000558146 NBR1Q14596 966 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms